Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g19076 Brassica carinata HOM05D010334 ORTHO05D010462 1.4e-69 266.2 133 100.0
BolC9t59163H Brassica oleracea HOM05D010334 ORTHO05D010462 1.4e-69 266.2 133 100.0
C09p63270 Brassica napus HOM05D010334 ORTHO05D010462 6.9e-69 263.8 133 99.2
A10p24530 Brassica napus HOM05D010334 ORTHO05D010462 9.3e-66 253.4 133 95.5
BraA10t44517Z Brassica rapa HOM05D010334 ORTHO05D010462 9.3e-66 253.4 133 95.5
BcaC04g24250 Brassica carinata HOM05D010334 ORTHO05D010462 3.1e-53 211.8 133 81.2
BcaNung04180 Brassica carinata HOM05D010334 ORTHO05D010462 1.2e-36 156.8 132 62.9
C02p06460 Brassica napus HOM05D010334 ORTHO05D010462 1.0e-35 153.7 131 60.3
BolC2t06592H Brassica oleracea HOM05D010334 ORTHO05D010462 1.0e-35 153.7 131 60.3
A02p02220 Brassica napus HOM05D010334 ORTHO05D010462 1.5e-34 149.8 131 58.8
BraA02t05194Z Brassica rapa HOM05D010334 ORTHO05D010462 2.5e-34 149.1 131 58.0
Sp6g30180 Schrenkiella parvula HOM05D010334 ORTHO05D010462 4.2e-34 148.3 131 57.3
Sp6g30190 Schrenkiella parvula HOM05D010334 ORTHO05D010462 2.2e-30 136.0 130 53.1
Thhalv10015565m.g Eutrema salsugineum HOM05D010334 ORTHO05D010462 4.5e-28 128.3 131 48.9
AT5G13825 Arabidopsis thaliana HOM05D010334 ORTHO05D010462 1.8e-21 106.3 122 47.5
AL6G24450 Arabidopsis lyrata HOM05D010334 ORTHO05D010462 7.0e-21 104.4 122 48.4
CARHR107240 Cardamine hirsuta HOM05D010334 ORTHO05D010462 8.0e-17 90.9 111 44.1
Carub.0006s1201 Capsella rubella HOM05D010334 ORTHO05D010462 5.2e-16 88.2 111 44.1
CARHR199610 Cardamine hirsuta HOM05D010334 ORTHO05D010462 1.5e-15 86.7 141 41.8
Gohir.A10G219350 Gossypium hirsutum HOM05D009017 ORTHO05D010462 6.6e-11 71.2 64 53.1
CARHR260670 Cardamine hirsuta HOM05D010334 ORTHO05D010462 1.9e-10 69.7 118 36.4
Duzib114G0060 Durio zibethinus HOM05D009017 ORTHO05D010462 3.3e-10 68.9 64 51.6
Gohir.D10G228766 Gossypium hirsutum HOM05D009017 ORTHO05D010462 5.6e-10 68.2 61 54.1
Gohir.A10G219300 Gossypium hirsutum HOM05D009017 ORTHO05D010462 7.3e-10 67.8 78 44.9
VMungo0464G0182 Vigna mungo HOM05D009017 ORTHO05D010462 8.0e-09 64.3 83 37.3
Gohir.D10G228733 Gossypium hirsutum HOM05D009017 ORTHO05D010462 1.0e-08 63.9 64 48.4
Actinidia32413 Actinidia chinensis HOM05D009017 ORTHO05D010462 1.4e-08 63.5 85 38.8
COL.COLO4_15045 Corchorus olitorius HOM05D009017 ORTHO05D010462 1.8e-08 63.2 67 44.8
Gohir.A05G298250 Gossypium hirsutum HOM05D009017 ORTHO05D010462 3.1e-08 62.4 71 43.7
Phvul.004G001100 Phaseolus vulgaris HOM05D009017 ORTHO05D010462 6.8e-08 61.2 101 36.6
Gohir.D10G230025 Gossypium hirsutum HOM05D009017 ORTHO05D010462 8.9e-08 60.8 64 46.9
Lj2g0020276 Lotus japonicus HOM05D009017 ORTHO05D010462 8.9e-08 60.8 131 34.4
Atru.chr12.449 Acer truncatum HOM05D010334 ORTHO05D010462 1.2e-07 60.5 85 38.8
Gorai.011G262600 Gossypium raimondii HOM05D009017 ORTHO05D010462 1.2e-07 60.5 71 42.3
Hma1.2p1_0953F.1_g241070 Hydrangea macrophylla HOM05D009017 ORTHO05D010462 1.5e-07 60.1 107 34.6
CARHR107230 Cardamine hirsuta HOM05D010334 ORTHO05D010462 2.6e-07 59.3 111 32.4
Cpa.g.sc1.225 Carica papaya HOM05D009017 ORTHO05D010462 7.5e-07 57.8 55 49.1
Cpa.g.sc1118.2 Carica papaya HOM05D009017 ORTHO05D010462 2.2e-06 56.2 71 43.7
Thecc.10G042200 Theobroma cacao HOM05D009017 ORTHO05D010462 2.2e-06 56.2 110 34.5
Phvul.008G010400 Phaseolus vulgaris HOM05D009017 ORTHO05D010462 3.7e-06 55.5 74 39.2
Psat1g090800 Pisum sativum HOM05D009017 ORTHO05D010462 3.7e-06 55.5 75 40.0
VMungo1383G3025 Vigna mungo HOM05D009017 ORTHO05D010462 4.9e-06 55.1 89 37.1


User provided reference genes

Program Settings