Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 1.2e-52 209.5 103 100.0
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 1.2e-52 209.5 103 100.0
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 2.7e-52 208.4 103 99.0
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 3.5e-52 208.0 103 99.0
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 3.5e-52 208.0 103 99.0
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 8.6e-43 176.8 104 86.5
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 4.3e-42 174.5 103 84.5
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 4.3e-42 174.5 103 84.5
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 1.2e-41 172.9 103 83.5
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 3.4e-39 164.9 103 83.5
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 1.2e-36 156.4 103 77.7
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 2.7e-36 155.2 103 75.7
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 5.1e-35 151.0 104 71.2
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 3.5e-28 128.3 108 57.4
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 1.7e-27 125.9 106 56.6
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 8.6e-27 123.6 110 54.5
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 1.5e-26 122.9 110 55.5
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 3.3e-26 121.7 106 54.7
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 3.3e-26 121.7 97 57.7
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 4.3e-26 121.3 102 59.8
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 9.5e-26 120.2 106 54.7
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 1.6e-25 119.4 106 51.9
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 1.6e-25 119.4 110 51.8
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 1.6e-25 119.4 109 52.3
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 2.1e-25 119.0 109 50.5
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 2.8e-25 118.6 108 57.4
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 4.7e-25 117.9 111 54.1
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 8.1e-25 117.1 109 53.2
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 8.1e-25 117.1 111 53.2
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 1.1e-24 116.7 106 53.8
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 1.1e-24 116.7 102 52.9
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 1.8e-24 115.9 111 51.4
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 1.8e-24 115.9 111 51.4
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 2.4e-24 115.5 107 53.3
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 2.4e-24 115.5 109 53.2
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 6.8e-24 114.0 108 51.9
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 6.8e-24 114.0 108 51.9
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 8.9e-24 113.6 107 52.3
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 8.9e-24 113.6 107 52.3
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 8.9e-24 113.6 109 54.1
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 8.9e-24 113.6 108 51.9
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 1.2e-23 113.2 101 56.4
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 1.5e-23 112.8 109 47.7
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 1.5e-23 112.8 109 47.7
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 2.0e-23 112.5 108 50.9
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 2.0e-23 112.5 108 51.9
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 2.6e-23 112.1 108 52.8
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 2.6e-23 112.1 109 52.3
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 3.4e-23 111.7 109 46.8
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 3.4e-23 111.7 111 50.5
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 5.8e-23 110.9 105 53.3
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 5.8e-23 110.9 99 54.5
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 5.8e-23 110.9 106 51.9
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 5.8e-23 110.9 108 51.9
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 5.8e-23 110.9 107 51.4
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 5.8e-23 110.9 108 51.9
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 7.6e-23 110.5 112 49.1
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 7.6e-23 110.5 112 49.1
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 7.6e-23 110.5 107 50.5
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 7.6e-23 110.5 111 49.5
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 7.6e-23 110.5 108 50.9
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 7.6e-23 110.5 109 49.5
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 9.9e-23 110.2 100 53.0
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 1.3e-22 109.8 109 50.5
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 2.2e-22 109.0 100 53.0
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.9e-22 108.6 111 49.5
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 2.9e-22 108.6 107 49.5
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 3.8e-22 108.2 99 56.6
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 6.4e-22 107.5 108 49.1
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 6.4e-22 107.5 108 49.1
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 8.4e-22 107.1 111 48.6
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 8.4e-22 107.1 109 48.6
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 1.1e-21 106.7 107 48.6
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 1.4e-21 106.3 111 47.7
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 2.4e-21 105.5 108 49.1
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 4.2e-21 104.8 111 47.7
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 5.4e-21 104.4 109 47.7
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 5.4e-21 104.4 101 52.5
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 9.2e-21 103.6 107 48.6
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 9.2e-21 103.6 108 48.1
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 1.2e-20 103.2 111 46.8
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 1.2e-20 103.2 105 50.5
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 1.6e-20 102.8 108 47.2
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 4.6e-20 101.3 107 49.5
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 6.0e-20 100.9 111 49.5
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 6.0e-20 100.9 112 51.8
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 1.3e-19 99.8 108 49.1
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 1.3e-19 99.8 108 48.1
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 3.9e-19 98.2 99 51.5
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 1.9e-18 95.9 71 63.4
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 1.9e-18 95.9 99 51.5
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 2.5e-18 95.5 71 62.0
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 7.3e-18 94.0 101 47.5
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 4.8e-17 91.3 70 61.4
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 8.1e-17 90.5 110 44.5
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.1e-16 90.1 70 60.0
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 2.4e-16 89.0 67 61.2
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 3.1e-16 88.6 104 43.3
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 5.3e-16 87.8 79 54.4
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 9.0e-16 87.0 100 46.0
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.2e-15 86.7 65 63.1
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 4.9e-14 81.3 71 57.7
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 5.6e-10 67.8 112 41.1
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 5.3e-08 61.2 75 41.3
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 2.9e-06 55.5 38 73.7


User provided reference genes

Program Settings