Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g18881 Brassica carinata HOM05D003580 ORTHO05D001363 2.8e-34 147.9 68 100.0
BcaC04g18885 Brassica carinata HOM05D003580 ORTHO05D001363 2.8e-34 147.9 68 100.0
BcaC04g20230 Brassica carinata HOM05D003580 ORTHO05D001363 1.1e-27 125.9 68 88.2
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 1.3e-26 122.5 68 85.3
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 2.8e-26 121.3 68 83.8
BraA10t44341Z Brassica rapa HOM05D000439 ORTHO05D001363 2.9e-23 111.3 68 82.4
BcaC04g18891 Brassica carinata HOM05D003580 ORTHO05D001363 4.7e-21 104.0 68 77.9
BolC9t58908H Brassica oleracea HOM05D000439 ORTHO05D001363 3.0e-20 101.3 68 76.5
Sp6g27840 Schrenkiella parvula HOM05D000439 ORTHO05D001363 5.3e-17 90.5 69 68.1
AL6G27220 Arabidopsis lyrata HOM05D000439 ORTHO05D001363 1.0e-12 76.3 67 61.2
BraA10t44339Z Brassica rapa HOM05D000439 ORTHO05D001363 1.4e-12 75.9 47 76.6
Thhalv10013493m.g Eutrema salsugineum HOM05D000439 ORTHO05D001363 1.8e-12 75.5 63 63.5
AT5G16320 Arabidopsis thaliana HOM05D000439 ORTHO05D001363 5.7e-11 70.5 67 55.2
CARHR196990 Cardamine hirsuta HOM05D000439 ORTHO05D001363 1.1e-09 66.2 63 58.7
Carub.0006s1451 Capsella rubella HOM05D000439 ORTHO05D001363 4.1e-09 64.3 67 53.7
Carub.0001s3013 Capsella rubella HOM05D000439 ORTHO05D001363 1.7e-07 58.9 74 44.6
Thhalv10009580m.g Eutrema salsugineum HOM05D000439 ORTHO05D001363 2.9e-07 58.2 71 47.9
Aa31LG2G14230 Aethionema arabicum HOM05D000439 ORTHO05D001363 3.8e-07 57.8 63 46.0
BcaC05g27198 Brassica carinata HOM05D000439 ORTHO05D001363 1.1e-06 56.2 70 48.6
A09p34520 Brassica napus HOM05D000439 ORTHO05D001363 1.1e-06 56.2 70 48.6
BolC5t31828H Brassica oleracea HOM05D000439 ORTHO05D001363 1.1e-06 56.2 70 48.6
BraA09t38993Z Brassica rapa HOM05D000439 ORTHO05D001363 1.1e-06 56.2 70 48.6
AT1G31814 Arabidopsis thaliana HOM05D000439 ORTHO05D001363 9.5e-06 53.1 69 44.9
C05p31040 Brassica napus HOM05D000439 ORTHO05D001363 9.5e-06 53.1 70 47.1


User provided reference genes

Program Settings