Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g18433 Brassica carinata HOM05D004709 ORTHO05D005669 1.9e-43 178.7 88 100.0
C02p63420 Brassica napus HOM05D004709 ORTHO05D005669 1.9e-43 178.7 88 100.0
BolC2t12409H Brassica oleracea HOM05D004709 ORTHO05D005669 1.9e-43 178.7 88 100.0
C07p56170 Brassica napus HOM05D004709 ORTHO05D005669 9.0e-41 169.9 88 96.6
BraA02t09093Z Brassica rapa HOM05D004709 ORTHO05D005669 1.2e-40 169.5 88 96.6
BcaC01g01257 Brassica carinata HOM05D004709 ORTHO05D005669 2.0e-40 168.7 88 96.6
BolC3t21308H Brassica oleracea HOM05D004709 ORTHO05D005669 2.0e-40 168.7 88 96.6
A02p41520 Brassica napus HOM05D004709 ORTHO05D005669 4.5e-40 167.5 88 95.5
BcaC07g40932 Brassica carinata HOM05D004709 ORTHO05D005669 2.9e-39 164.9 88 93.2
C08p39260 Brassica napus HOM05D004709 ORTHO05D005669 2.9e-39 164.9 88 93.2
C03p89860 Brassica napus HOM05D004709 ORTHO05D005669 8.4e-39 163.3 88 93.2
A03p02360 Brassica napus HOM05D004709 ORTHO05D005669 1.4e-38 162.5 88 92.0
BolC6t39173H Brassica oleracea HOM05D004709 ORTHO05D005669 3.2e-38 161.4 88 92.0
C06p42660 Brassica napus HOM05D004709 ORTHO05D005669 9.3e-38 159.8 88 92.0
C02p61460 Brassica napus HOM05D004709 ORTHO05D005669 1.2e-37 159.5 88 92.0
BolC2t12197H Brassica oleracea HOM05D004709 ORTHO05D005669 1.2e-37 159.5 88 92.0
A03p46850 Brassica napus HOM05D004709 ORTHO05D005669 5.6e-35 150.6 88 86.4
Sp2g24450 Schrenkiella parvula HOM05D004709 ORTHO05D005669 5.6e-35 150.6 88 85.2
BcaC06g33217 Brassica carinata HOM05D004709 ORTHO05D005669 1.1e-33 146.4 86 86.0
C07p44900 Brassica napus HOM05D004709 ORTHO05D005669 3.1e-33 144.8 88 84.1
BolC7t45013H Brassica oleracea HOM05D004709 ORTHO05D005669 3.1e-33 144.8 88 84.1
BraA03t13805Z Brassica rapa HOM05D004709 ORTHO05D005669 3.1e-33 144.8 88 83.0
Thhalv10005205m.g Eutrema salsugineum HOM05D004709 ORTHO05D005669 6.9e-33 143.7 88 83.0
AL8G37880 Arabidopsis lyrata HOM05D004709 ORTHO05D005669 2.0e-32 142.1 88 79.5
AT5G61220 Arabidopsis thaliana HOM05D004709 ORTHO05D005669 2.6e-32 141.7 88 79.5
BcaC06g33172 Brassica carinata HOM05D004709 ORTHO05D005669 5.5e-30 134.0 88 79.5
Carub.0008s2188 Capsella rubella HOM05D004709 ORTHO05D005669 7.1e-30 133.7 88 73.9
CARHR274970 Cardamine hirsuta HOM05D004709 ORTHO05D005669 1.6e-29 132.5 88 75.0
BcaC03g15765 Brassica carinata HOM05D004709 ORTHO05D005669 4.0e-25 117.9 88 76.1
C05p13760 Brassica napus HOM05D004709 ORTHO05D005669 4.9e-23 110.9 76 76.3
BolC5t30114H Brassica oleracea HOM05D004709 ORTHO05D005669 4.9e-23 110.9 76 76.3
BcaC05g25635 Brassica carinata HOM05D004709 ORTHO05D005669 6.5e-23 110.5 76 76.3
Aa31LG11G2140 Aethionema arabicum HOM05D004709 ORTHO05D005669 3.2e-22 108.2 85 62.4
BraA07t31299Z Brassica rapa HOM05D004709 ORTHO05D005669 3.2e-22 108.2 76 73.7
Carub.0006s3376 Capsella rubella HOM05D004709 ORTHO05D005669 3.2e-22 108.2 83 67.5
Nitab4.5_0002881g0040 Nicotiana tabacum HOM05D004709 ORTHO05D005669 3.0e-20 101.7 81 59.3
THA.LOC104801321 Tarenaya hassleriana HOM05D004709 ORTHO05D005669 3.0e-20 101.7 85 58.8
Nitab4.5_0004511g0070 Nicotiana tabacum HOM05D004709 ORTHO05D005669 3.9e-20 101.3 81 59.3
CAN.G479.31 Capsicum annuum HOM05D004709 ORTHO05D005669 7.4e-19 97.1 80 57.5
ClCG04G011960 Citrullus lanatus HOM05D004709 ORTHO05D005669 1.3e-18 96.3 83 56.6
BraA10t43343Z Brassica rapa HOM05D004709 ORTHO05D005669 1.6e-18 95.9 52 92.3
Cpa.g.sc94.6 Carica papaya HOM05D004709 ORTHO05D005669 1.6e-18 95.9 82 57.3
Solyc03g115490.1 Solanum lycopersicum HOM05D004709 ORTHO05D005669 1.6e-18 95.9 79 55.7
Sopen03g034490 Solanum pennellii HOM05D004709 ORTHO05D005669 1.6e-18 95.9 79 55.7
PGSC0003DMG400024653 Solanum tuberosum HOM05D004709 ORTHO05D005669 1.6e-18 95.9 79 55.7
MBI16_g16369_MAGBIO Magnolia biondii HOM05D004709 ORTHO05D005669 2.2e-18 95.5 81 53.1
PSO478G1650 Papaver somniferum HOM05D004709 ORTHO05D005669 2.2e-18 95.5 81 54.3
ECA246G5156 Erigeron canadensis HOM05D004709 ORTHO05D005669 2.8e-18 95.1 80 56.2
Ciclev10022528m.g Citrus clementina HOM05D004709 ORTHO05D005669 6.3e-18 94.0 80 55.0
MELO3C017207.2 Cucumis melo HOM05D004709 ORTHO05D005669 8.2e-18 93.6 80 55.0
BcaC07g40820 Brassica carinata HOM05D004709 ORTHO05D005669 1.1e-17 93.2 48 97.9
C08p38130 Brassica napus HOM05D004709 ORTHO05D005669 1.1e-17 93.2 48 97.9
BolC8t51388H Brassica oleracea HOM05D004709 ORTHO05D005669 1.1e-17 93.2 48 97.9
Gohir.A12G180600 Gossypium hirsutum HOM05D004709 ORTHO05D005669 1.1e-17 93.2 80 56.2
Ah.10g032000 Amaranthus hybridus HOM05D004709 ORTHO05D005669 1.8e-17 92.4 85 52.9
Gohir.D12G183300 Gossypium hirsutum HOM05D004709 ORTHO05D005669 1.8e-17 92.4 80 56.2
TWI18G0167 Tripterygium wilfordii HOM05D004709 ORTHO05D005669 1.8e-17 92.4 82 53.7
TAR622G0455 Trochodendron aralioides HOM05D004709 ORTHO05D005669 1.8e-17 92.4 82 53.7
EL10Ac2g03100 Beta vulgaris HOM05D004709 ORTHO05D005669 2.4e-17 92.0 84 53.6
COL.COLO4_36893 Corchorus olitorius HOM05D004709 ORTHO05D005669 2.4e-17 92.0 80 56.2
Sc10g0003220 Simmondsia chinensis HOM05D004709 ORTHO05D005669 3.1e-17 91.7 80 55.0
Aqoxy3G03572 Aquilegia oxysepala HOM05D004709 ORTHO05D005669 4.1e-17 91.3 78 53.8
CiPaw.11G049800 Carya illinoinensis HOM05D004709 ORTHO05D005669 4.1e-17 91.3 82 52.4
AUR62008495 Chenopodium quinoa HOM05D004709 ORTHO05D005669 4.1e-17 91.3 84 50.0
TAR371G0159 Trochodendron aralioides HOM05D004709 ORTHO05D005669 4.1e-17 91.3 80 55.0
MELO3C002013.2 Cucumis melo HOM05D004709 ORTHO05D005669 5.3e-17 90.9 79 54.4
Thecc.03G097000 Theobroma cacao HOM05D004709 ORTHO05D005669 5.3e-17 90.9 80 56.2
ClCG06G015840 Citrullus lanatus HOM05D004709 ORTHO05D005669 6.9e-17 90.5 80 55.0
AUR62018162 Chenopodium quinoa HOM05D004709 ORTHO05D005669 9.0e-17 90.1 81 51.9
AUR62042435 Chenopodium quinoa HOM05D004709 ORTHO05D005669 9.0e-17 90.1 81 51.9
Lsat_1_v5_gn_5_22101 Lactuca sativa HOM05D004709 ORTHO05D005669 9.0e-17 90.1 80 52.5
Nn4g23362 Nelumbo nucifera HOM05D004709 ORTHO05D005669 9.0e-17 90.1 82 50.0
Sed0019301 Sechium edule HOM05D004709 ORTHO05D005669 9.0e-17 90.1 81 54.3
COL.COLO4_31014 Corchorus olitorius HOM05D004709 ORTHO05D005669 1.2e-16 89.7 80 55.0
Sed0002201 Sechium edule HOM05D004709 ORTHO05D005669 1.2e-16 89.7 81 53.1
CARHR099960 Cardamine hirsuta HOM05D004709 ORTHO05D005669 1.5e-16 89.4 66 69.7
HanXRQChr05g0157171 Helianthus annuus HOM05D004709 ORTHO05D005669 1.5e-16 89.4 82 48.8
Sed0023667 Sechium edule HOM05D004709 ORTHO05D005669 1.5e-16 89.4 81 54.3
MD09G1062400 Malus domestica HOM05D004709 ORTHO05D005669 2.0e-16 89.0 81 49.4
Potri.009G079800 Populus trichocarpa HOM05D004709 ORTHO05D005669 2.0e-16 89.0 82 50.0
QL10p018658 Quercus lobata HOM05D004709 ORTHO05D005669 2.0e-16 89.0 82 51.2
CsaV3_1G005830 Cucumis sativus L. HOM05D004709 ORTHO05D005669 2.6e-16 88.6 79 53.2
Duzib205G1485 Durio zibethinus HOM05D004709 ORTHO05D005669 2.6e-16 88.6 82 52.4
Lalb_Chr10g0093091 Lupinus albus HOM05D004709 ORTHO05D005669 2.6e-16 88.6 82 52.4
Os08g0239000 Oryza sativa ssp. japonica HOM05D004709 ORTHO05D005669 2.6e-16 88.6 85 52.9
Zm00001eb398330 Zea mays HOM05D004709 ORTHO05D005669 2.6e-16 88.6 85 51.8
Nn7g35950 Nelumbo nucifera HOM05D004709 ORTHO05D005669 3.4e-16 88.2 85 48.2
Rhsim08G0148900 Rhododendron simsii HOM05D004709 ORTHO05D005669 3.4e-16 88.2 81 51.9
Gohir.D03G095600 Gossypium hirsutum HOM05D004709 ORTHO05D005669 4.5e-16 87.8 78 55.1
Gorai.003G100300 Gossypium raimondii HOM05D004709 ORTHO05D005669 4.5e-16 87.8 78 55.1
HanXRQChr04g0101451 Helianthus annuus HOM05D004709 ORTHO05D005669 4.5e-16 87.8 80 53.8
PGR083G1512 Punica granatum HOM05D004709 ORTHO05D005669 4.5e-16 87.8 82 53.7
Glyma.08G242600 Glycine max HOM05D004709 ORTHO05D005669 5.9e-16 87.4 80 53.8
Gorai.008G196600 Gossypium raimondii HOM05D004709 ORTHO05D005669 5.9e-16 87.4 80 53.8
Lsat_1_v5_gn_1_13721 Lactuca sativa HOM05D004709 ORTHO05D005669 5.9e-16 87.4 79 54.4
Os10g0406600 Oryza sativa ssp. japonica HOM05D004709 ORTHO05D005669 5.9e-16 87.4 85 52.9
Prupe.3G258000 Prunus persica HOM05D004709 ORTHO05D005669 5.9e-16 87.4 82 48.8
Peaxi162Scf00106g00072 Petunia axillaris HOM05D004709 ORTHO05D005669 7.7e-16 87.0 79 53.2
RcHm_v2.0_Chr2g0166371 Rosa chinensis HOM05D004709 ORTHO05D005669 1.0e-15 86.7 83 48.2
ATR0064G063 Amborella trichopoda HOM05D004709 ORTHO05D005669 1.3e-15 86.3 80 50.0
Duzib084G0757 Durio zibethinus HOM05D004709 ORTHO05D005669 1.3e-15 86.3 80 55.0
Migut.D01673 Erythranthe guttata HOM05D004709 ORTHO05D005669 1.3e-15 86.3 81 50.6
Atru.chr2.2420 Acer truncatum HOM05D004709 ORTHO05D005669 1.7e-15 85.9 79 53.2
SHI27018 Sapria himalayana HOM05D004709 ORTHO05D005669 1.7e-15 85.9 82 46.3
Cfa019297 Carpinus fangiana HOM05D004709 ORTHO05D005669 2.2e-15 85.5 82 50.0
Eucgr.B00568 Eucalyptus grandis HOM05D004709 ORTHO05D005669 2.2e-15 85.5 82 50.0
Glyma.18G264800 Glycine max HOM05D004709 ORTHO05D005669 2.2e-15 85.5 80 52.5
Phvul.008G035200 Phaseolus vulgaris HOM05D004709 ORTHO05D005669 2.2e-15 85.5 80 50.0
Gohir.A03G069100 Gossypium hirsutum HOM05D004709 ORTHO05D005669 2.9e-15 85.1 78 53.8
Manes.06G087400 Manihot esculenta HOM05D004709 ORTHO05D005669 2.9e-15 85.1 82 48.8
Nn3g17388 Nelumbo nucifera HOM05D004709 ORTHO05D005669 2.9e-15 85.1 82 48.8
Manes.14G083600 Manihot esculenta HOM05D004709 ORTHO05D005669 3.8e-15 84.7 82 48.8
Pp3c1_9190 Physcomitrium patens HOM05D004709 ORTHO05D005669 3.8e-15 84.7 77 53.2
FvH4_6g47340 Fragaria vesca HOM05D004709 ORTHO05D005669 5.0e-15 84.3 82 47.6
FAN14G4554 Fragaria x ananassa HOM05D004709 ORTHO05D005669 5.0e-15 84.3 82 47.6
CANSAT56G2672 Cannabis sativa HOM05D004709 ORTHO05D005669 6.5e-15 84.0 81 48.1
MD00G1156500 Malus domestica HOM05D004709 ORTHO05D005669 1.1e-14 83.2 82 43.9
Zm00001eb011200 Zea mays HOM05D004709 ORTHO05D005669 1.4e-14 82.8 85 48.2
FAN09G0998 Fragaria x ananassa HOM05D004709 ORTHO05D005669 2.5e-14 82.0 82 47.6
AUR62021597 Chenopodium quinoa HOM05D004709 ORTHO05D005669 3.2e-14 81.6 84 51.2
SalBow5G3312 Salvia bowleyana HOM05D004709 ORTHO05D005669 3.2e-14 81.6 79 48.1
Ca_06818_v3 Cicer arietinum L. HOM05D004709 ORTHO05D005669 5.5e-14 80.9 79 48.1
DCAR_013071 Daucus carota HOM05D000316 ORTHO05D000374 5.5e-14 80.9 73 56.2
Psat3g200920 Pisum sativum HOM05D004709 ORTHO05D005669 5.5e-14 80.9 82 45.1
Rhsim12G0152500 Rhododendron simsii HOM05D004709 ORTHO05D005669 9.4e-14 80.1 76 50.0
HanXRQChr17g0545301 Helianthus annuus HOM05D004709 ORTHO05D005669 1.2e-13 79.7 80 50.0
Medtr0287s0050 Medicago truncatula HOM05D004709 ORTHO05D005669 1.2e-13 79.7 81 44.4
Medtr7g012870 Medicago truncatula HOM05D004709 ORTHO05D005669 1.2e-13 79.7 81 44.4
FAN05G1711 Fragaria x ananassa HOM05D004709 ORTHO05D005669 1.6e-13 79.3 82 45.1
Prupe.5G200900 Prunus persica HOM05D004709 ORTHO05D005669 1.6e-13 79.3 82 47.6
FAN02G1874 Fragaria x ananassa HOM05D004709 ORTHO05D005669 6.1e-13 77.4 82 45.1
Dinv38784 Davidia involucrata HOM05D004709 ORTHO05D005669 7.9e-13 77.0 61 55.7
Lj1g0000800 Lotus japonicus HOM05D004709 ORTHO05D005669 3.0e-12 75.1 83 44.6
Sc04g0003050 Simmondsia chinensis HOM05D004709 ORTHO05D005669 3.0e-12 75.1 82 42.7
Gohir.D12G183150 Gossypium hirsutum HOM05D004709 ORTHO05D005669 1.1e-11 73.2 60 58.3
CBR_g38475 Chara braunii HOM05D004709 ORTHO05D005669 1.5e-11 72.8 79 46.8
Cre08.g382850 Chlamydomonas reinhardtii HOM05D004709 ORTHO05D005669 4.3e-11 71.2 81 48.1
MD08G1088600 Malus domestica HOM05D004709 ORTHO05D005669 4.3e-11 71.2 80 40.0
GSVIVG01007919001 Vitis vinifera HOM05D004709 ORTHO05D005669 4.3e-11 71.2 63 49.2
Actinidia04845 Actinidia chinensis HOM05D004709 ORTHO05D005669 5.7e-11 70.9 59 54.2
Actinidia09247 Actinidia chinensis HOM05D004709 ORTHO05D005669 5.7e-11 70.9 63 52.4
Dinv10689 Davidia involucrata HOM05D004709 ORTHO05D005669 7.4e-11 70.5 73 45.2
Mapoly0030s0074 Marchantia polymorpha HOM05D004709 ORTHO05D005669 7.4e-11 70.5 81 40.7
Atru.chr9.371 Acer truncatum HOM05D004709 ORTHO05D005669 1.7e-10 69.3 82 42.7
Sabra09G0061800 Salix brachista HOM05D004709 ORTHO05D005669 8.2e-10 67.0 55 52.7
SMO174G0212 Selaginella moellendorffii HOM05D004709 ORTHO05D005669 1.1e-09 66.6 78 48.7
Pp3c9_6850 Physcomitrium patens HOM05D004709 ORTHO05D005669 5.9e-08 60.8 79 40.5
CSS0011072 Camellia sinensis var. sinensis HOM05D004709 ORTHO05D005669 1.0e-07 60.1 60 46.7
Medtr7g083770 Medicago truncatula HOM05D004709 ORTHO05D005669 1.0e-07 60.1 73 39.7
Cfa024147 Carpinus fangiana HOM05D004709 ORTHO05D005669 2.9e-07 58.5 58 48.3
unitig_37.g12784 Utricularia gibba HOM05D004709 ORTHO05D005669 1.9e-06 55.8 55 49.1
CDE02G0474 Ceratophyllum demersum HOM05D004709 ORTHO05D005669 9.4e-06 53.5 33 69.7


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