Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g18399 Brassica carinata HOM05D011091 ORTHO05D013198 2.2e-51 205.3 100 100.0
BolC2t12539H Brassica oleracea HOM05D011091 ORTHO05D013198 2.2e-51 205.3 100 100.0
C02p64780 Brassica napus HOM05D011091 ORTHO05D013198 1.9e-50 202.2 100 99.0
A02p44390 Brassica napus HOM05D011091 ORTHO05D013198 5.1e-48 194.1 100 95.0
BraA02t09356Z Brassica rapa HOM05D011091 ORTHO05D013198 5.2e-45 184.1 100 93.0
BcaB07g29654 Brassica carinata HOM05D011091 ORTHO05D013198 6.2e-38 160.6 100 82.0
CARHR280880 Cardamine hirsuta HOM05D011091 ORTHO05D013198 4.3e-31 137.9 101 68.3
Thhalv10005488m.g Eutrema salsugineum HOM05D011091 ORTHO05D013198 3.1e-29 131.7 107 65.4
AL8G44630 Arabidopsis lyrata HOM05D011091 ORTHO05D013198 1.3e-27 126.3 105 64.8
AT5G66815 Arabidopsis thaliana HOM05D011091 ORTHO05D013198 8.4e-27 123.6 105 64.8
A07p17100 Brassica napus HOM05D011091 ORTHO05D013198 1.2e-25 119.8 103 63.1
BraA07t29437Z Brassica rapa HOM05D011091 ORTHO05D013198 2.7e-25 118.6 103 62.1
BolC7t43026H Brassica oleracea HOM05D011091 ORTHO05D013198 2.3e-24 115.5 103 61.2
Carub.0008s2769 Capsella rubella HOM05D011091 ORTHO05D013198 6.6e-24 114.0 102 60.8
C07p24960 Brassica napus HOM05D011091 ORTHO05D013198 1.5e-23 112.8 103 60.2
Sp2g29860 Schrenkiella parvula HOM05D011091 ORTHO05D013198 1.3e-22 109.8 100 63.0
BcaB02g09987 Brassica carinata HOM05D011091 ORTHO05D013198 7.6e-20 100.5 103 60.2
BcaC06g34751 Brassica carinata HOM05D011091 ORTHO05D013198 6.5e-11 70.9 66 59.1
Psat4g087360 Pisum sativum HOM05D008581 ORTHO05D011864 3.5e-09 65.1 112 34.8
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 6.7e-08 60.8 115 34.8
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 1.5e-07 59.7 121 33.9
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 1.5e-07 59.7 113 36.3
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 1.9e-07 59.3 116 34.5
arahy.Tifrunner.gnm1.ann1.7MI303 Arachis hypogaea HOM05D010906 ORTHO05D011864 2.5e-07 58.9 100 36.0
arahy.Tifrunner.gnm1.ann1.HVX4VE Arachis hypogaea HOM05D010906 ORTHO05D011864 2.5e-07 58.9 100 37.0
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 3.3e-07 58.5 115 32.2
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 4.3e-07 58.2 120 31.7
Ca_21178_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 2.1e-06 55.8 115 33.0
Ca_22185_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 2.1e-06 55.8 115 33.0
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 2.1e-06 55.8 97 33.0
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 2.1e-06 55.8 97 33.0
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 2.8e-06 55.5 109 35.8
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 2.8e-06 55.5 109 35.8
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 2.8e-06 55.5 109 35.8
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 2.8e-06 55.5 116 32.8
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 2.8e-06 55.5 116 31.9
Gorai.003G022300 Gossypium raimondii HOM05D013202 ORTHO05D009966 8.2e-06 53.9 106 36.8


User provided reference genes

Program Settings