Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g18305 Brassica carinata HOM05D018403 ORTHO05D093804 3.7e-85 318.2 160 100.0
BcaB07g29776 Brassica carinata HOM05D000609 ORTHO05D000462 3.3e-65 251.9 272 56.2
BcaB07g29778 Brassica carinata HOM05D000609 ORTHO05D000462 3.3e-65 251.9 272 56.2
BcaB07g29775 Brassica carinata HOM05D018403 ORTHO05D000462 1.9e-60 236.1 196 68.4
C02p63820 Brassica napus HOM05D000609 ORTHO05D000462 2.8e-48 195.7 276 45.7
BolC2t12450H Brassica oleracea HOM05D000609 ORTHO05D000462 2.8e-48 195.7 276 45.7
A02p43690 Brassica napus HOM05D000609 ORTHO05D000462 5.8e-46 188.0 279 44.4
BraA02t09293Z Brassica rapa HOM05D000609 ORTHO05D000462 5.8e-46 188.0 279 44.4
BcaC03g18306 Brassica carinata HOM05D000609 ORTHO05D000462 3.8e-45 185.3 270 44.4
Sp2g28210 Schrenkiella parvula HOM05D000609 ORTHO05D000462 5.8e-38 161.4 121 68.6
BcaC01g02744 Brassica carinata HOM05D000609 ORTHO05D000462 7.6e-38 161.0 283 40.3
C03p60990 Brassica napus HOM05D000609 ORTHO05D000462 7.6e-38 161.0 283 40.3
BolC3t18361H Brassica oleracea HOM05D000609 ORTHO05D000462 7.6e-38 161.0 283 40.3
Thhalv10005326m.g Eutrema salsugineum HOM05D000609 ORTHO05D000462 2.9e-37 159.1 108 77.8
BraA06t26129Z Brassica rapa HOM05D000609 ORTHO05D000462 2.1e-35 152.9 283 39.2
A06p31970 Brassica napus HOM05D000609 ORTHO05D000462 2.7e-35 152.5 283 38.9
BcaB02g09877 Brassica carinata HOM05D000609 ORTHO05D000462 1.9e-33 146.4 279 36.6
AL8G42630 Arabidopsis lyrata HOM05D000609 ORTHO05D000462 9.9e-30 134.0 104 68.3
Carub.0008s2597 Capsella rubella HOM05D000609 ORTHO05D000462 1.4e-28 130.2 102 64.7
AT5G65130 Arabidopsis thaliana HOM05D000609 ORTHO05D000462 4.3e-25 118.6 102 65.7
CARHR279040 Cardamine hirsuta HOM05D000609 ORTHO05D000462 6.9e-23 111.3 107 60.7
BraA06t26128Z Brassica rapa HOM05D000609 ORTHO05D000462 1.9e-20 103.2 92 64.1
BcaB02g09868 Brassica carinata HOM05D018403 ORTHO05D000462 2.1e-16 89.7 161 44.1
BcaB02g09871 Brassica carinata HOM05D018403 ORTHO05D000462 2.1e-16 89.7 161 44.1
BcaC01g02743 Brassica carinata HOM05D000609 ORTHO05D000462 2.0e-14 83.2 78 64.1
C03p61000 Brassica napus HOM05D000609 ORTHO05D000462 2.0e-14 83.2 78 64.1
THA.LOC104818489 Tarenaya hassleriana HOM05D000609 ORTHO05D000462 4.9e-13 78.6 106 45.3
THA.LOC104799123 Tarenaya hassleriana HOM05D000609 ORTHO05D000462 1.8e-10 70.1 106 47.2
Aa31LG1G16840 Aethionema arabicum HOM05D000609 ORTHO05D000462 5.3e-07 58.5 58 51.7
Duzib264G1009 Durio zibethinus HOM05D000609 ORTHO05D000462 1.5e-06 57.0 113 35.4
Sp7g36120 Schrenkiella parvula HOM05D000609 ORTHO05D000462 2.0e-06 56.6 113 44.2
Rhsim10G0159000 Rhododendron simsii HOM05D000609 ORTHO05D000462 2.6e-06 56.2 51 56.9
Duzib187G0777 Durio zibethinus HOM05D000609 ORTHO05D000462 4.5e-06 55.5 82 41.5
Duzib187G1519 Durio zibethinus HOM05D000609 ORTHO05D000462 4.5e-06 55.5 82 41.5
Duzib147G1624 Durio zibethinus HOM05D000609 ORTHO05D000462 5.9e-06 55.1 88 39.8


User provided reference genes

Program Settings