Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g18285 Brassica carinata HOM05D009783 ORTHO05D011958 1.0e-40 169.9 102 100.0
BcaC03g18287 Brassica carinata HOM05D009783 ORTHO05D011958 1.8e-37 159.1 113 85.8
BcaC03g18290 Brassica carinata HOM05D009783 ORTHO05D011958 1.8e-37 159.1 113 85.8
C02p63650 Brassica napus HOM05D009783 ORTHO05D011958 1.8e-37 159.1 113 85.8
BolC2t12431H Brassica oleracea HOM05D009783 ORTHO05D011958 1.8e-37 159.1 113 85.8
BraA02t09283Z Brassica rapa HOM05D009783 ORTHO05D011958 1.0e-32 143.3 115 68.7
A02p43560 Brassica napus HOM05D009783 ORTHO05D011958 4.4e-31 137.9 115 66.1
BcaB07g29764 Brassica carinata HOM05D009783 ORTHO05D011958 2.8e-30 135.2 103 75.7
C02p63670 Brassica napus HOM05D009783 ORTHO05D011958 3.8e-27 124.8 58 100.0
AT5G64900 Arabidopsis thaliana HOM05D009783 ORTHO05D011958 1.1e-13 80.1 97 48.5
BcaB02g09839 Brassica carinata HOM05D009783 ORTHO05D011958 1.6e-12 76.3 106 44.3
Thhalv10005173m.g Eutrema salsugineum HOM05D009783 ORTHO05D011958 2.0e-12 75.9 105 41.9
A06p31680 Brassica napus HOM05D009783 ORTHO05D011958 4.6e-12 74.7 109 42.2
CARHR278930 Cardamine hirsuta HOM05D009783 ORTHO05D011958 1.3e-11 73.2 106 44.3
BcaC01g02722 Brassica carinata HOM05D009783 ORTHO05D011958 2.3e-11 72.4 107 43.0
C03p61280 Brassica napus HOM05D009783 ORTHO05D011958 2.3e-11 72.4 107 43.0
Carub.0008s2573 Capsella rubella HOM05D009783 ORTHO05D011958 2.3e-11 72.4 117 42.7
Sp2g27970 Schrenkiella parvula HOM05D009783 ORTHO05D011958 5.0e-11 71.2 108 46.3
BolC3t18389H Brassica oleracea HOM05D009783 ORTHO05D011958 8.6e-11 70.5 107 42.1
AT5G64890 Arabidopsis thaliana HOM05D009783 ORTHO05D011958 4.3e-10 68.2 97 46.4
AL8G35260 Arabidopsis lyrata HOM05D009783 ORTHO05D011958 5.6e-10 67.8 101 45.5
AL139U10010 Arabidopsis lyrata HOM05D009783 ORTHO05D011958 2.1e-09 65.9 101 44.6
BraA06t26103Z Brassica rapa HOM05D009783 ORTHO05D011958 1.1e-08 63.5 56 57.1
AL8G42380 Arabidopsis lyrata HOM05D009783 ORTHO05D011958 1.2e-07 60.1 98 59.2
CARHR278900 Cardamine hirsuta HOM05D009783 ORTHO05D011958 4.4e-07 58.2 58 56.9


User provided reference genes

Program Settings