Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 6.3e-76 287.3 143 100.0
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 3.1e-75 285.0 143 99.3
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 3.6e-71 271.6 139 97.8
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 6.1e-71 270.8 143 93.7
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 2.6e-69 265.4 143 90.9
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 9.7e-69 263.5 144 92.4
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 2.8e-68 261.9 143 90.2
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 2.8e-68 261.9 143 90.2
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 8.2e-68 260.4 143 89.5
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 1.4e-67 259.6 143 88.8
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 1.4e-67 259.6 143 88.8
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 4.1e-67 258.1 145 89.7
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 1.5e-66 256.1 143 88.1
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 1.3e-65 253.1 134 93.3
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 8.5e-65 250.4 144 87.5
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 1.6e-63 246.1 140 85.7
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 1.4e-62 243.0 143 81.8
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 1.3e-60 236.5 139 82.0
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.4e-59 233.0 143 81.1
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 4.8e-52 208.0 141 70.2
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 5.3e-51 204.5 139 71.2
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 4.5e-50 201.4 139 70.5
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 1.0e-49 200.3 136 70.6
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 3.8e-49 198.4 137 71.5
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 1.5e-48 196.4 137 69.3
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 1.9e-48 196.1 139 66.9
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 2.5e-48 195.7 137 67.9
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 3.2e-48 195.3 137 70.8
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 5.5e-48 194.5 139 68.3
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 5.5e-48 194.5 137 66.4
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 5.5e-48 194.5 138 65.2
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 9.4e-48 193.7 140 65.7
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 9.4e-48 193.7 139 64.0
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 1.2e-47 193.4 140 65.7
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 1.6e-47 193.0 137 65.7
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 2.1e-47 192.6 139 67.6
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 2.7e-47 192.2 136 68.4
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 2.7e-47 192.2 139 64.7
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 3.6e-47 191.8 137 68.6
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 3.6e-47 191.8 137 66.4
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 8.0e-47 190.7 138 66.7
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 1.0e-46 190.3 136 66.2
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 1.8e-46 189.5 136 68.4
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 3.0e-46 188.7 140 67.1
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 3.0e-46 188.7 139 65.5
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 3.0e-46 188.7 139 66.2
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 3.0e-46 188.7 137 63.5
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 4.0e-46 188.3 136 68.4
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 5.2e-46 188.0 139 66.2
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 5.2e-46 188.0 137 65.0
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 5.2e-46 188.0 137 66.4
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 6.8e-46 187.6 139 64.7
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 8.8e-46 187.2 139 66.2
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 8.8e-46 187.2 137 64.2
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 1.2e-45 186.8 138 65.2
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 1.2e-45 186.8 136 66.2
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.2e-45 186.8 136 66.2
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.5e-45 186.4 137 65.0
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 1.5e-45 186.4 136 66.2
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.5e-45 186.4 136 66.2
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.6e-45 185.7 136 66.2
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 3.4e-45 185.3 137 65.0
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 3.4e-45 185.3 137 63.5
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 5.7e-45 184.5 137 64.2
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 7.5e-45 184.1 137 61.3
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 1.3e-44 183.3 140 62.1
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 1.7e-44 183.0 142 62.0
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 2.2e-44 182.6 137 65.0
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.8e-44 182.2 137 62.8
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 3.7e-44 181.8 137 62.0
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 3.7e-44 181.8 137 62.0
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 3.7e-44 181.8 136 65.4
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 3.7e-44 181.8 136 65.4
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 3.7e-44 181.8 139 61.2
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.7e-44 181.8 137 62.8
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.7e-44 181.8 139 64.7
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 4.8e-44 181.4 119 73.1
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 4.8e-44 181.4 137 61.3
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 6.3e-44 181.0 137 63.5
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 8.3e-44 180.6 139 60.4
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 1.1e-43 180.3 136 64.0
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 1.8e-43 179.5 137 62.0
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 2.4e-43 179.1 139 59.7
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 4.1e-43 178.3 139 63.3
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 7.0e-43 177.6 137 62.0
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 7.0e-43 177.6 139 60.4
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 9.1e-43 177.2 138 61.6
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.2e-42 176.8 139 64.0
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.2e-42 176.8 136 61.8
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.0e-42 176.0 132 65.2
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 2.3e-41 172.6 138 61.6
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 3.8e-41 171.8 139 61.9
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 2.5e-40 169.1 125 65.6
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 2.5e-40 169.1 125 65.6
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 7.2e-40 167.5 120 67.5
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 7.2e-40 167.5 120 67.5
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 7.2e-40 167.5 120 69.2
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 1.6e-39 166.4 125 64.8
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 2.8e-39 165.6 120 69.2
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.8e-39 165.6 129 60.5
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.8e-39 165.6 129 60.5
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 1.0e-38 163.7 137 57.7
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 2.3e-38 162.5 111 68.5
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 5.2e-38 161.4 142 56.3
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 1.5e-37 159.8 85 85.9
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 1.5e-37 159.8 138 58.0
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 9.8e-37 157.1 104 67.3
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 2.8e-36 155.6 136 58.8
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 4.9e-36 154.8 104 67.3
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 3.1e-35 152.1 118 61.0
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 5.4e-35 151.4 137 54.0
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 1.2e-34 150.2 140 51.4
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.6e-34 149.8 103 68.0
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 3.5e-34 148.7 135 54.8
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 1.7e-33 146.4 115 60.9
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.5e-32 143.3 134 53.7
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.5e-32 143.3 131 50.4
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.2e-31 140.2 122 55.7
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 1.0e-30 137.1 120 53.3
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 2.6e-29 132.5 110 58.2
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.7e-28 129.8 115 52.2
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 4.9e-28 128.3 127 51.2
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 9.2e-27 124.0 123 48.8
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 1.7e-25 119.8 94 64.9
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.1e-24 117.1 83 62.7
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.5e-24 116.7 96 60.4
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 5.2e-22 108.2 119 45.4
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 6.8e-22 107.8 87 62.1
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 6.4e-20 101.3 90 54.4
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 3.1e-14 82.4 92 46.7
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 9.9e-13 77.4 91 48.4


User provided reference genes

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