Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17972 Brassica carinata HOM05D029566 ORTHO05D027379 3.8e-79 298.1 151 100.0
BcaNung01227 Brassica carinata HOM05D004333 ORTHO05D005363 1.2e-24 117.1 173 45.7
CARHR189090 Cardamine hirsuta HOM05D004333 ORTHO05D005363 5.9e-24 114.8 173 43.9
A06p35170 Brassica napus HOM05D004333 ORTHO05D005363 7.7e-24 114.4 173 45.7
BraA06t26437Z Brassica rapa HOM05D004333 ORTHO05D005363 7.7e-24 114.4 173 45.7
Thhalv10003502m.g Eutrema salsugineum HOM05D004333 ORTHO05D005363 2.9e-23 112.5 173 43.9
Sp2g22970 Schrenkiella parvula HOM05D004333 ORTHO05D005363 3.8e-23 112.1 173 45.1
AT5G24350 Arabidopsis thaliana HOM05D004333 ORTHO05D005363 6.5e-23 111.3 173 43.4
C07p43390 Brassica napus HOM05D004333 ORTHO05D005363 5.5e-22 108.2 173 43.4
BolC7t44866H Brassica oleracea HOM05D004333 ORTHO05D005363 5.5e-22 108.2 173 43.4
AL6G35880 Arabidopsis lyrata HOM05D004333 ORTHO05D005363 7.2e-22 107.8 173 42.8
Carub.0006s2218 Capsella rubella HOM05D004333 ORTHO05D005363 9.4e-22 107.5 172 42.4
Aa31LG11G3630 Aethionema arabicum HOM05D004333 ORTHO05D005363 2.3e-20 102.8 170 41.8
C02p60330 Brassica napus HOM05D029566 ORTHO05D027379 7.2e-14 81.3 45 91.1
BolC2t12089H Brassica oleracea HOM05D029566 ORTHO05D027379 7.2e-14 81.3 45 91.1
A02p40500 Brassica napus HOM05D029566 ORTHO05D027379 1.2e-13 80.5 45 91.1
BcaC03g17980 Brassica carinata HOM05D004333 ORTHO05D005363 5.2e-12 75.1 41 90.2
BcaNung02039 Brassica carinata HOM05D004333 ORTHO05D005363 8.8e-12 74.3 77 57.1
THA.LOC104798907 Tarenaya hassleriana HOM05D004333 ORTHO05D005363 5.7e-11 71.6 173 34.1


User provided reference genes

Program Settings