Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 1.2e-236 822.8 417 100.0
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 4.6e-204 714.5 401 91.0
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 2.4e-192 675.6 368 93.8
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 4.7e-188 661.4 390 89.0
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 4.2e-181 638.3 417 81.5
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 6.1e-172 607.8 368 87.0
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 8.2e-76 288.5 203 77.8
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 5.7e-69 265.8 195 75.4
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 5.7e-69 265.8 195 75.4
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 1.2e-66 258.1 180 78.9
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 4.5e-66 256.1 196 73.5
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 1.2e-61 241.5 169 78.1
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 8.3e-52 208.8 146 76.7
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 5.0e-49 199.5 103 100.0
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 2.1e-47 194.1 141 75.2
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 1.2e-34 151.8 160 58.8
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 1.2e-34 151.8 105 78.1
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 1.2e-34 151.8 105 78.1
BcaB08g34407 Brassica carinata HOM05D010239 ORTHO05D032921 1.7e-20 104.8 71 76.1
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 2.4e-19 100.9 234 35.5
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 5.4e-19 99.8 178 42.1
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 5.4e-19 99.8 178 42.1
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 7.1e-19 99.4 205 39.5
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 9.2e-19 99.0 186 44.1
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 1.2e-18 98.6 234 35.0
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 2.7e-18 97.4 183 38.8
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 2.7e-18 97.4 180 37.8
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 2.7e-18 97.4 180 37.8
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 1.3e-17 95.1 180 37.2
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 2.3e-17 94.4 183 38.8
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 3.0e-17 94.0 183 38.3
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 6.6e-17 92.8 207 36.7
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 1.1e-16 92.0 188 42.6
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 1.9e-16 91.3 183 38.3
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 2.5e-16 90.9 99 48.5
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 9.5e-16 89.0 180 37.8
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 1.2e-15 88.6 174 38.5
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 2.8e-15 87.4 185 41.6
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 3.6e-15 87.0 101 49.5
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 4.7e-15 86.7 258 32.9
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 1.1e-14 85.5 103 51.5
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 4.0e-14 83.6 97 45.4
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 5.2e-14 83.2 80 57.5
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 6.8e-14 82.8 99 48.5
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 8.9e-14 82.4 80 62.5
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 1.5e-13 81.6 183 33.9
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 1.5e-13 81.6 185 39.5
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 2.6e-13 80.9 170 40.6
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 2.6e-13 80.9 170 40.6
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 2.6e-13 80.9 183 33.9
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 3.4e-13 80.5 79 62.0
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 7.6e-13 79.3 92 53.3
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 9.9e-13 79.0 76 63.2
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 2.2e-12 77.8 114 47.4
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 2.9e-12 77.4 111 43.2
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 4.9e-12 76.6 235 31.1
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 1.1e-11 75.5 158 38.0
BolC5t33755H Brassica oleracea HOM05D010036 ORTHO05D018636 1.1e-11 75.5 51 76.5
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 1.4e-11 75.1 267 30.7
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 4.1e-11 73.6 78 55.1
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 3.5e-10 70.5 133 42.1
BcaB01g03011 Brassica carinata HOM05D010239 ORTHO05D095759 4.6e-10 70.1 69 56.5
A03p36030 Brassica napus HOM05D010036 ORTHO05D032432 4.6e-10 70.1 54 72.2
BcaC09g47704 Brassica carinata HOM05D010036 ORTHO05D018636 6.0e-10 69.7 46 76.1
BolC9t59132H Brassica oleracea HOM05D000940 ORTHO05D000782 5.1e-09 66.6 48 75.0
A02p06990 Brassica napus HOM05D038240 ORTHO05D039926 8.7e-09 65.9 51 68.6
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 1.1e-08 65.5 155 36.8
BolC1t05092H Brassica oleracea HOM05D010036 ORTHO05D018636 1.1e-08 65.5 54 70.4
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 1.1e-08 65.5 155 36.8
C06p43670 Brassica napus HOM05D010036 ORTHO05D018636 1.5e-08 65.1 115 43.5
BolC9t58443H Brassica oleracea HOM05D010036 ORTHO05D018636 1.9e-08 64.7 54 68.5
BraA04t17511Z Brassica rapa HOM05D010036 ORTHO05D024402 2.5e-08 64.3 47 74.5
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 3.3e-08 63.9 160 40.0
C02p55990 Brassica napus HOM05D010036 ORTHO05D018636 4.3e-08 63.5 48 70.8
BolC2t11656H Brassica oleracea HOM05D010036 ORTHO05D018636 4.3e-08 63.5 48 70.8
BolC6t37251H Brassica oleracea HOM05D010036 ORTHO05D024402 5.6e-08 63.2 54 68.5
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 1.2e-07 62.0 170 34.7
C04p61770 Brassica napus HOM05D010036 ORTHO05D018636 2.8e-07 60.8 48 68.8
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 3.6e-07 60.5 74 44.6
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 4.7e-07 60.1 117 40.2
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 1.1e-06 58.9 113 43.4
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 1.8e-06 58.2 93 37.6
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 1.8e-06 58.2 67 49.3
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 1.8e-06 58.2 123 40.7
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 1.8e-06 58.2 93 37.6
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 2.4e-06 57.8 123 40.7


User provided reference genes

Program Settings