Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17839 Brassica carinata HOM05D008154 ORTHO05D012557 1.6e-105 386.0 182 100.0
C02p58790 Brassica napus HOM05D008154 ORTHO05D012557 1.6e-105 386.0 182 100.0
A02p39190 Brassica napus HOM05D008154 ORTHO05D012557 5.0e-102 374.4 182 97.3
BolC2t11938H Brassica oleracea HOM05D008154 ORTHO05D012557 5.5e-101 370.9 182 96.2
BraA02t08884Z Brassica rapa HOM05D008154 ORTHO05D012557 5.5e-101 370.9 182 96.7
BcaB07g32008 Brassica carinata HOM05D008154 ORTHO05D012557 4.7e-92 341.3 183 89.6
BcaB07g29945 Brassica carinata HOM05D008154 ORTHO05D012557 8.5e-86 320.5 171 89.5
Sp2g21640 Schrenkiella parvula HOM05D008154 ORTHO05D012557 8.0e-84 313.9 172 86.0
BcaB04g19751 Brassica carinata HOM05D008154 ORTHO05D012557 4.4e-82 308.1 174 83.9
Thhalv10005491m.g Eutrema salsugineum HOM05D008154 ORTHO05D012557 4.7e-76 288.1 168 80.4
C09p06570 Brassica napus HOM05D008154 ORTHO05D012557 6.1e-76 287.7 170 81.8
BraA09t36243Z Brassica rapa HOM05D008154 ORTHO05D012557 1.4e-75 286.6 169 81.1
AT5G26090 Arabidopsis thaliana HOM05D008154 ORTHO05D012557 8.8e-75 283.9 163 79.8
CARHR187360 Cardamine hirsuta HOM05D008154 ORTHO05D012557 8.8e-75 283.9 180 75.0
AL6G38080 Arabidopsis lyrata HOM05D008154 ORTHO05D012557 1.5e-74 283.1 163 80.4
A09p06010 Brassica napus HOM05D008154 ORTHO05D012557 2.0e-74 282.7 161 83.9
BolC9t53583H Brassica oleracea HOM05D008154 ORTHO05D012557 9.1e-72 273.9 160 83.8
Carub.0006s2384 Capsella rubella HOM05D008154 ORTHO05D012557 1.0e-70 270.4 165 75.2
BcaC04g23600 Brassica carinata HOM05D008154 ORTHO05D012557 2.2e-70 269.2 163 79.1
Aa31LG11G5040 Aethionema arabicum HOM05D008154 ORTHO05D012557 2.7e-63 245.7 161 66.5
THA.LOC104811313 Tarenaya hassleriana HOM05D008154 ORTHO05D012557 6.2e-52 208.0 158 59.5
Sp3g14190 Schrenkiella parvula HOM05D008154 ORTHO05D012553 2.3e-30 136.3 136 50.0
Thhalv10022366m.g Eutrema salsugineum HOM05D008154 ORTHO05D012553 3.0e-30 136.0 136 48.5
BcaB04g20900 Brassica carinata HOM05D008154 ORTHO05D012553 3.9e-30 135.6 171 45.0
AT3G15860 Arabidopsis thaliana HOM05D008154 ORTHO05D012553 1.2e-28 130.6 169 42.6
A05p33540 Brassica napus HOM05D008154 ORTHO05D012553 1.2e-28 130.6 163 44.8
BolC5t33799H Brassica oleracea HOM05D008154 ORTHO05D012553 1.2e-28 130.6 135 47.4
BraA05t22175Z Brassica rapa HOM05D008154 ORTHO05D012553 1.2e-28 130.6 163 44.8
BcaC09g48565 Brassica carinata HOM05D008154 ORTHO05D012553 1.6e-28 130.2 136 47.8
A01p38240 Brassica napus HOM05D008154 ORTHO05D012553 1.6e-28 130.2 136 47.8
BolC1t04810H Brassica oleracea HOM05D008154 ORTHO05D012553 1.6e-28 130.2 136 47.8
C05p50530 Brassica napus HOM05D008154 ORTHO05D012553 2.1e-28 129.8 135 47.4
C01p48500 Brassica napus HOM05D008154 ORTHO05D012553 3.6e-28 129.0 136 47.8
BraA05t22176Z Brassica rapa HOM05D008154 ORTHO05D012553 3.6e-28 129.0 163 44.2
BraA01t03880Z Brassica rapa HOM05D008154 ORTHO05D012553 4.7e-28 128.6 136 47.1
Aa31LG8G3050 Aethionema arabicum HOM05D008154 ORTHO05D012553 3.4e-26 122.5 165 39.4
CARHR090960 Cardamine hirsuta HOM05D008154 ORTHO05D012553 4.4e-26 122.1 136 44.9
THA.LOC104810614 Tarenaya hassleriana HOM05D008154 ORTHO05D012553 9.9e-26 120.9 144 44.4
BcaC05g28926 Brassica carinata HOM05D008154 ORTHO05D012553 1.7e-25 120.2 135 47.4
Carub.0003s1560 Capsella rubella HOM05D008154 ORTHO05D012553 7.1e-24 114.8 136 44.1
BcaB04g19752 Brassica carinata HOM05D008154 ORTHO05D012061 4.5e-10 68.9 190 29.5
THA.LOC104799699 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 4.5e-10 68.9 176 31.2
BcaNung03981 Brassica carinata HOM05D008154 ORTHO05D012061 5.8e-10 68.6 153 32.0
BolC7t44720H Brassica oleracea HOM05D008154 ORTHO05D012061 5.8e-10 68.6 163 31.3
C07p41900 Brassica napus HOM05D008154 ORTHO05D012061 1.3e-09 67.4 163 30.7
Sp2g21650 Schrenkiella parvula HOM05D008154 ORTHO05D012061 1.7e-09 67.0 163 30.1
A06p36580 Brassica napus HOM05D008154 ORTHO05D012061 3.8e-09 65.9 151 30.5
BraA06t26584Z Brassica rapa HOM05D008154 ORTHO05D012061 3.8e-09 65.9 151 30.5
BcaC04g23599 Brassica carinata HOM05D008154 ORTHO05D012061 4.9e-09 65.5 166 30.1
CARHR187350 Cardamine hirsuta HOM05D008154 ORTHO05D012061 6.4e-09 65.1 186 27.4
Thhalv10015823m.g Eutrema salsugineum HOM05D008154 ORTHO05D012061 3.2e-08 62.8 127 33.1
CARHR201330 Cardamine hirsuta HOM05D008154 ORTHO05D012061 4.2e-08 62.4 134 32.1
Sp6g31770 Schrenkiella parvula HOM05D008154 ORTHO05D012061 7.1e-08 61.6 127 33.1
AL6G22580 Arabidopsis lyrata HOM05D008154 ORTHO05D012061 3.5e-07 59.3 162 30.9
AT5G11830 Arabidopsis thaliana HOM05D008154 ORTHO05D012061 6.0e-07 58.5 142 30.3
Carub.0006s1036 Capsella rubella HOM05D008154 ORTHO05D012061 1.8e-06 57.0 151 27.8
BcaNung03980 Brassica carinata HOM05D008154 ORTHO05D012061 5.1e-06 55.5 96 33.3
Sp3g14170 Schrenkiella parvula HOM05D008154 ORTHO05D012553 6.7e-06 55.1 87 36.8


User provided reference genes

Program Settings