Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17819 Brassica carinata HOM05D003561 ORTHO05D004351 5.7e-125 451.1 248 100.0
C02p58430 Brassica napus HOM05D003561 ORTHO05D004351 1.5e-112 409.8 248 93.1
BolC2t11906H Brassica oleracea HOM05D003561 ORTHO05D004351 5.0e-81 305.1 250 74.4
C02p15790 Brassica napus HOM05D003561 ORTHO05D004351 4.9e-76 288.5 250 72.0
BolC3t20255H Brassica oleracea HOM05D003561 ORTHO05D004351 2.4e-75 286.2 250 71.2
BolC9t55360H Brassica oleracea HOM05D003561 ORTHO05D004351 5.1e-73 278.5 236 72.9
C01p04490 Brassica napus HOM05D003561 ORTHO05D004351 3.1e-70 269.2 213 68.5
BolC1t00435H Brassica oleracea HOM05D003561 ORTHO05D004351 3.1e-70 269.2 213 68.5
BcaNung04991 Brassica carinata HOM05D003561 ORTHO05D004351 2.6e-69 266.2 213 67.6
A01p04120 Brassica napus HOM05D003561 ORTHO05D004351 9.9e-69 264.2 213 67.1
BraA01t00401Z Brassica rapa HOM05D003561 ORTHO05D004351 9.9e-69 264.2 213 67.1
BcaNung04160 Brassica carinata HOM05D003561 ORTHO05D004351 1.1e-67 260.8 213 66.2
C09p44740 Brassica napus HOM05D003561 ORTHO05D004351 2.8e-63 246.1 208 66.3
Sp7g32080 Schrenkiella parvula HOM05D003561 ORTHO05D004351 2.9e-60 236.1 213 60.6
Thhalv10024491m.g Eutrema salsugineum HOM05D003561 ORTHO05D004351 1.7e-57 226.9 214 59.3
AL7G16990 Arabidopsis lyrata HOM05D003561 ORTHO05D004351 7.3e-56 221.5 213 57.3
C09p24450 Brassica napus HOM05D003561 ORTHO05D004351 1.1e-54 217.6 151 87.4
Carub.0007s0608 Capsella rubella HOM05D003561 ORTHO05D004351 2.6e-53 213.0 213 55.9
AT4G34280 Arabidopsis thaliana HOM05D003561 ORTHO05D004351 4.4e-53 212.2 213 55.9
Aa31sc72G40 Aethionema arabicum HOM05D003561 ORTHO05D004351 1.3e-52 210.7 213 55.4
CARHR242490 Cardamine hirsuta HOM05D003561 ORTHO05D004351 7.8e-50 201.4 212 53.3
THA.LOC104819541 Tarenaya hassleriana HOM05D003561 ORTHO05D004351 6.7e-41 171.8 211 44.5
Glyma.10G259600 Glycine max HOM05D003561 ORTHO05D004351 1.2e-29 134.4 169 41.4
Atru.chr5.2428 Acer truncatum HOM05D003561 ORTHO05D004351 5.8e-29 132.1 213 37.6
Cfa004615 Carpinus fangiana HOM05D003561 ORTHO05D004351 1.7e-28 130.6 213 37.1
Ciclev10027851m.g Citrus clementina HOM05D003561 ORTHO05D004351 1.4e-27 127.5 213 34.7
Dinv15779 Davidia involucrata HOM05D003561 ORTHO05D004351 2.5e-27 126.7 214 37.4
Gohir.A03G184800 Gossypium hirsutum HOM05D003561 ORTHO05D004351 2.5e-27 126.7 213 37.6
Gorai.005G233700 Gossypium raimondii HOM05D003561 ORTHO05D004351 2.5e-27 126.7 213 37.6
QL11p032306 Quercus lobata HOM05D003561 ORTHO05D004351 2.5e-27 126.7 213 36.6
GSVIVG01037885001 Vitis vinifera HOM05D003561 ORTHO05D004351 7.1e-27 125.2 213 36.2
Lalb_Chr02g0145171 Lupinus albus HOM05D003561 ORTHO05D004351 2.1e-26 123.6 213 33.3
Ca_11052_v3 Cicer arietinum L. HOM05D003561 ORTHO05D004351 2.7e-26 123.2 213 34.7
TWI75G1561 Tripterygium wilfordii HOM05D003561 ORTHO05D004351 6.1e-26 122.1 212 37.3
Gohir.D02G206300 Gossypium hirsutum HOM05D003561 ORTHO05D004351 7.9e-26 121.7 213 38.0
TPR.G27110 Trifolium pratense HOM05D003561 ORTHO05D004351 1.3e-25 120.9 213 31.9
arahy.Tifrunner.gnm1.ann1.Q24X8K Arachis hypogaea HOM05D003561 ORTHO05D004351 3.0e-25 119.8 213 31.9
Potri.001G297600 Populus trichocarpa HOM05D003561 ORTHO05D004351 3.0e-25 119.8 209 36.4
FAN20G0240 Fragaria x ananassa HOM05D003561 ORTHO05D004351 3.9e-25 119.4 218 35.3
RcHm_v2.0_Chr6g0254331 Rosa chinensis HOM05D003561 ORTHO05D004351 6.7e-25 118.6 213 36.2
FAN24G1860 Fragaria x ananassa HOM05D003561 ORTHO05D004351 1.5e-24 117.5 213 36.6
CSS0023905 Camellia sinensis var. sinensis HOM05D003561 ORTHO05D004351 1.9e-24 117.1 205 34.6
CSS0037584 Camellia sinensis var. sinensis HOM05D003561 ORTHO05D004351 1.9e-24 117.1 205 34.6
Medtr1g106905 Medicago truncatula HOM05D003561 ORTHO05D004351 1.9e-24 117.1 213 33.3
Psat6g216560 Pisum sativum HOM05D003561 ORTHO05D004351 1.9e-24 117.1 213 33.8
arahy.Tifrunner.gnm1.ann1.IMHW03 Arachis hypogaea HOM05D003561 ORTHO05D004351 2.5e-24 116.7 213 31.5
FAN15G0682 Fragaria x ananassa HOM05D003561 ORTHO05D004351 2.5e-24 116.7 213 36.2
Lj5g0023418 Lotus japonicus HOM05D003561 ORTHO05D004351 4.3e-24 115.9 213 33.8
FvH4_2g04670 Fragaria vesca HOM05D003561 ORTHO05D004351 5.7e-24 115.5 213 36.2
Aqoxy6G02799 Aquilegia oxysepala HOM05D003561 ORTHO05D004351 7.4e-24 115.2 213 34.3
Oeu011151.1 Olea europaea HOM05D003561 ORTHO05D004351 7.4e-24 115.2 213 33.8
Phvul.007G042500 Phaseolus vulgaris HOM05D003561 ORTHO05D004351 9.7e-24 114.8 213 32.9
vmacro19460 Vaccinium macrocarpon HOM05D003561 ORTHO05D004351 1.3e-23 114.4 206 34.0
Rhsim10G0161700 Rhododendron simsii HOM05D003561 ORTHO05D004351 2.2e-23 113.6 205 34.1
Thecc.02G112400 Theobroma cacao HOM05D003561 ORTHO05D004351 2.8e-23 113.2 213 35.2
Manes.10G073266 Manihot esculenta HOM05D003561 ORTHO05D004351 3.7e-23 112.8 213 33.3
Lsat_1_v5_gn_7_85901 Lactuca sativa HOM05D003561 ORTHO05D004351 6.3e-23 112.1 213 33.8
Duzib132G1062 Durio zibethinus HOM05D003561 ORTHO05D004351 8.2e-23 111.7 213 34.7
Sabra09G0071200 Salix brachista HOM05D003561 ORTHO05D004351 8.2e-23 111.7 208 34.6
Actinidia27978 Actinidia chinensis HOM05D003561 ORTHO05D004351 1.1e-22 111.3 207 32.9
FAN27G2112 Fragaria x ananassa HOM05D003561 ORTHO05D004351 1.8e-22 110.5 213 35.2
GSVIVG01000167001 Vitis vinifera HOM05D003561 ORTHO05D004351 2.4e-22 110.2 211 31.8
Nn5g30480 Nelumbo nucifera HOM05D003561 ORTHO05D004351 3.1e-22 109.8 212 32.5
TAR381G0090 Trochodendron aralioides HOM05D003561 ORTHO05D004351 1.2e-21 107.8 213 31.9
Dinv30056 Davidia involucrata HOM05D003561 ORTHO05D004351 1.5e-21 107.5 212 30.2
Potri.009G092500 Populus trichocarpa HOM05D003561 ORTHO05D004351 1.5e-21 107.5 206 35.0
VMungo0720G2973 Vigna mungo HOM05D003561 ORTHO05D004351 2.0e-21 107.1 213 32.9
Lj5A216G104 Lonicera japonica HOM05D003561 ORTHO05D004351 4.5e-21 105.9 196 34.7
MD05G1093800 Malus domestica HOM05D003561 ORTHO05D004351 5.9e-21 105.5 212 32.5
ECA236G4994 Erigeron canadensis HOM05D003561 ORTHO05D004351 7.7e-21 105.1 213 31.9
SalBow6G5634 Salvia bowleyana HOM05D003561 ORTHO05D004351 7.7e-21 105.1 116 44.0
HanXRQChr04g0128551 Helianthus annuus HOM05D003561 ORTHO05D004351 3.8e-20 102.8 213 30.5
PGR042G0884 Punica granatum HOM05D003561 ORTHO05D004351 3.8e-20 102.8 206 31.6
Cc02_g19520 Coffea canephora HOM05D003561 ORTHO05D004351 5.0e-20 102.4 210 32.4
Migut.B00411 Erythranthe guttata HOM05D003561 ORTHO05D004351 6.5e-20 102.1 214 29.9
Potri.007G051500 Populus trichocarpa HOM05D003561 ORTHO05D004351 8.5e-20 101.7 210 26.2
PSO675G3219 Papaver somniferum HOM05D003561 ORTHO05D004351 3.2e-19 99.8 213 30.5
Eucgr.G01293 Eucalyptus grandis HOM05D003561 ORTHO05D004351 4.2e-19 99.4 207 32.9
Lj7C86G5 Lonicera japonica HOM05D003561 ORTHO05D004351 5.5e-19 99.0 213 29.1
CSS0044154 Camellia sinensis var. sinensis HOM05D003561 ORTHO05D004351 1.2e-18 97.8 213 27.2
Ciclev10024935m.g Citrus clementina HOM05D003561 ORTHO05D004351 1.2e-18 97.8 213 25.4
PSO541G3211 Papaver somniferum HOM05D003561 ORTHO05D004351 1.6e-18 97.4 213 30.0
Atru.chr3.214 Acer truncatum HOM05D003561 ORTHO05D004351 3.6e-18 96.3 215 27.9
Atru.chr3.226 Acer truncatum HOM05D003561 ORTHO05D004351 3.6e-18 96.3 215 27.9
MSTRG.16699 Avicennia marina HOM05D003561 ORTHO05D004351 4.6e-18 95.9 116 40.5
Rhsim10G0104800 Rhododendron simsii HOM05D003561 ORTHO05D004351 7.9e-18 95.1 204 29.9
Manes.13G115200 Manihot esculenta HOM05D003561 ORTHO05D004351 1.4e-17 94.4 210 25.7
Solyc01g107360.4 Solanum lycopersicum HOM05D003561 ORTHO05D004351 2.3e-17 93.6 112 41.1
SGA_v2.0_scaffold225G43001 Striga asiatica HOM05D003561 ORTHO05D004351 2.3e-17 93.6 114 37.7
Hma1.2p1_0239F.1_g099850 Hydrangea macrophylla HOM05D003561 ORTHO05D004351 3.0e-17 93.2 213 27.7
COL.COLO4_32560 Corchorus olitorius HOM05D003561 ORTHO05D004351 2.0e-16 90.5 193 32.6
PGR102G2010 Punica granatum HOM05D003561 ORTHO05D004351 2.5e-16 90.1 201 28.9
PGSC0003DMG400025758 Solanum tuberosum HOM05D003561 ORTHO05D004351 2.5e-16 90.1 196 31.1
Nitab4.5_0010275g0030 Nicotiana tabacum HOM05D003561 ORTHO05D004351 7.4e-16 88.6 103 41.7
Actinidia12002 Actinidia chinensis HOM05D003561 ORTHO05D004351 9.7e-16 88.2 215 27.9
CANSAT01G2799 Cannabis sativa HOM05D003561 ORTHO05D004351 9.7e-16 88.2 208 25.5
Haze_10212 Corylus avellana HOM05D003561 ORTHO05D004351 9.7e-16 88.2 180 32.8
EL10Ac6g15669 Beta vulgaris HOM05D003561 ORTHO05D004351 2.8e-15 86.7 206 26.7
Cfa004087 Carpinus fangiana HOM05D003561 ORTHO05D004351 4.8e-15 85.9 210 24.3
Thecc.01G067200 Theobroma cacao HOM05D003561 ORTHO05D004351 4.8e-15 85.9 211 25.6
AUR62027366 Chenopodium quinoa HOM05D003561 ORTHO05D004351 6.3e-15 85.5 206 30.1
Sopen01g049600 Solanum pennellii HOM05D003561 ORTHO05D004351 6.3e-15 85.5 99 41.4
Sabra07G0045400 Salix brachista HOM05D003561 ORTHO05D004351 8.2e-15 85.1 99 32.3
Nitab4.5_0001480g0050 Nicotiana tabacum HOM05D003561 ORTHO05D004351 2.4e-14 83.6 113 38.1
Rhsim05G0089400 Rhododendron simsii HOM05D003561 ORTHO05D004351 2.4e-14 83.6 180 31.7
CiPaw.01G008500 Carya illinoinensis HOM05D003561 ORTHO05D004351 4.5e-13 79.3 209 24.9
AUR62003959 Chenopodium quinoa HOM05D003561 ORTHO05D004351 4.5e-13 79.3 207 25.1
Nitab4.5_0000284g0010 Nicotiana tabacum HOM05D003561 ORTHO05D004351 5.9e-13 79.0 212 25.9
Prupe.6G225400 Prunus persica HOM05D003561 ORTHO05D004351 7.7e-13 78.6 209 23.0
Cc07_g06660 Coffea canephora HOM05D003561 ORTHO05D004351 1.3e-12 77.8 111 29.7
Duzib147G0573 Durio zibethinus HOM05D003561 ORTHO05D004351 1.3e-12 77.8 211 24.2
Rhsim10G0161500 Rhododendron simsii HOM05D003561 ORTHO05D004351 1.3e-12 77.8 181 29.8
CAN.G1482.2 Capsicum annuum HOM05D003561 ORTHO05D004351 2.9e-12 76.6 208 26.0
MD02G1180800 Malus domestica HOM05D003561 ORTHO05D004351 2.9e-12 76.6 209 23.0
ECA238G3157 Erigeron canadensis HOM05D003561 ORTHO05D004351 5.0e-12 75.9 200 27.0
HanXRQChr14g0449611 Helianthus annuus HOM05D003561 ORTHO05D004351 5.0e-12 75.9 215 26.0
Gohir.D03G026700 Gossypium hirsutum HOM05D003561 ORTHO05D004351 1.1e-11 74.7 105 33.3
Nitab4.5_0000604g0020 Nicotiana tabacum HOM05D003561 ORTHO05D004351 1.1e-11 74.7 201 25.9
Pp3c22_17660 Physcomitrium patens HOM05D003561 ORTHO05D004351 1.4e-11 74.3 205 23.9
Gorai.003G028400 Gossypium raimondii HOM05D003561 ORTHO05D004351 2.5e-11 73.6 105 32.4
Solyc02g064800.3 Solanum lycopersicum HOM05D003561 ORTHO05D004351 2.5e-11 73.6 213 24.9
Ah.03g146260 Amaranthus hybridus HOM05D003561 ORTHO05D004351 3.2e-11 73.2 103 34.0
Gohir.A02G153700 Gossypium hirsutum HOM05D003561 ORTHO05D004351 3.2e-11 73.2 211 24.2
Sopen02g014910 Solanum pennellii HOM05D003561 ORTHO05D004351 3.2e-11 73.2 213 25.4
Hund29375 Selenicereus undatus HOM05D003561 ORTHO05D004351 4.2e-11 72.8 197 25.4
FvH4_1g17060 Fragaria vesca HOM05D003561 ORTHO05D004351 7.2e-11 72.0 104 29.8
Hund29372 Selenicereus undatus HOM05D003561 ORTHO05D004351 1.2e-10 71.2 197 24.9
FAN28G0575 Fragaria x ananassa HOM05D003561 ORTHO05D004351 2.1e-10 70.5 99 30.3
RcHm_v2.0_Chr6g0254361 Rosa chinensis HOM05D003561 ORTHO05D004351 3.6e-10 69.7 85 43.5
C09p50480 Brassica napus HOM05D003561 ORTHO05D004351 6.1e-10 68.9 33 93.9
RcHm_v2.0_Chr2g0107231 Rosa chinensis HOM05D003561 ORTHO05D004351 1.0e-09 68.2 207 24.6
Peaxi162Scf00016g02531 Petunia axillaris HOM05D003561 ORTHO05D004351 1.4e-09 67.8 82 40.2
Eucgr.H02268 Eucalyptus grandis HOM05D003561 ORTHO05D004351 3.0e-09 66.6 206 23.3
PGSC0003DMG400013016 Solanum tuberosum HOM05D003561 ORTHO05D004351 3.0e-09 66.6 213 23.5
FAN19G0232 Fragaria x ananassa HOM05D003561 ORTHO05D004351 3.9e-09 66.2 99 28.3
FAN26G2049 Fragaria x ananassa HOM05D003561 ORTHO05D004351 3.9e-09 66.2 99 28.3
DCAR_001664 Daucus carota HOM05D003561 ORTHO05D004351 5.1e-09 65.9 195 29.7
CiPaw.05G014100 Carya illinoinensis HOM05D003561 ORTHO05D004351 1.1e-08 64.7 147 33.3
Lsat_1_v5_gn_2_83541 Lactuca sativa HOM05D003561 ORTHO05D004351 1.1e-08 64.7 215 24.2
Pp3c18_4410 Physcomitrium patens HOM05D003561 ORTHO05D004351 4.4e-08 62.8 201 23.4
Hund06710 Selenicereus undatus HOM05D003561 ORTHO05D004351 4.4e-08 62.8 178 28.7
Glyma.20G131200 Glycine max HOM05D003561 ORTHO05D004351 1.3e-07 61.2 168 28.0
Ah.09g232050 Amaranthus hybridus HOM05D003561 ORTHO05D004351 3.7e-07 59.7 175 28.6
Hund13924 Selenicereus undatus HOM05D003561 ORTHO05D004351 4.8e-07 59.3 100 33.0
Haze_15327 Corylus avellana HOM05D003561 ORTHO05D004351 1.4e-06 57.8 177 22.6
AUR62038271 Chenopodium quinoa HOM05D003561 ORTHO05D004351 2.4e-06 57.0 181 23.2
SEGI_28319 Sequoiadendron giganteum HOM05D003561 ORTHO05D004351 7.0e-06 55.5 182 24.2


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