Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 7.9e-80 300.4 158 100.0
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 6.7e-79 297.4 158 98.1
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 3.3e-78 295.0 158 97.5
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 3.3e-70 268.5 158 91.8
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 1.2e-67 260.0 158 89.2
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 2.9e-66 255.4 169 82.8
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 6.1e-64 247.7 166 81.3
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 6.7e-63 244.2 164 79.3
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 2.0e-62 242.7 166 81.9
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 4.4e-62 241.5 163 79.8
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 9.7e-62 240.4 164 81.7
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 2.2e-61 239.2 163 78.5
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 6.3e-61 237.7 165 79.4
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 8.2e-61 237.3 163 78.5
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 3.5e-59 231.9 169 78.7
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 3.5e-59 231.9 169 78.7
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 1.3e-58 229.9 163 76.1
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 3.7e-45 185.3 158 64.6
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 7.0e-44 181.0 151 69.5
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 1.0e-42 177.2 178 59.6
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 3.0e-39 165.6 107 85.0
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 5.7e-38 161.4 170 58.2
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 9.8e-38 160.6 168 58.3
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 2.8e-37 159.1 161 60.2
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.4e-36 156.8 162 58.6
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 1.0e-34 150.6 162 57.4
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 1.1e-33 147.1 160 54.4
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 1.5e-33 146.7 162 53.7
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 2.5e-33 146.0 153 59.5
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 4.3e-33 145.2 160 53.8
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 5.6e-33 144.8 160 53.8
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 7.3e-33 144.4 160 53.8
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 7.3e-33 144.4 161 51.6
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 1.6e-32 143.3 149 55.7
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 2.1e-32 142.9 161 52.8
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 2.8e-32 142.5 162 54.3
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 4.7e-32 141.7 162 51.2
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 8.0e-32 141.0 159 52.8
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 3.0e-31 139.0 159 51.6
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 6.8e-31 137.9 151 53.6
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 8.9e-31 137.5 162 50.0
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 1.5e-30 136.7 148 53.4
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 2.0e-30 136.3 163 52.8
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 2.6e-30 136.0 152 50.7
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 4.4e-30 135.2 161 50.9
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 5.7e-30 134.8 156 54.5
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 5.7e-30 134.8 157 50.3
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 5.7e-30 134.8 141 56.0
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 7.5e-30 134.4 164 49.4
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 9.8e-30 134.0 160 49.4
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 1.7e-29 133.3 163 51.5
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 2.9e-29 132.5 155 51.0
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 3.7e-29 132.1 148 52.0
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 3.7e-29 132.1 137 54.0
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 6.4e-29 131.3 162 51.9
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 6.4e-29 131.3 151 53.6
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 8.3e-29 131.0 163 48.5
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 8.3e-29 131.0 163 49.7
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 1.1e-28 130.6 156 50.0
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 1.4e-28 130.2 150 50.7
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 3.2e-28 129.0 156 48.7
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 4.1e-28 128.6 155 49.7
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 4.1e-28 128.6 142 54.2
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 4.1e-28 128.6 144 53.5
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 5.4e-28 128.3 149 53.0
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 5.4e-28 128.3 164 47.0
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 9.2e-28 127.5 165 46.1
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.6e-27 126.7 144 52.8
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 2.0e-27 126.3 154 47.4
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 2.0e-27 126.3 147 51.0
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 2.7e-27 125.9 148 54.7
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 2.7e-27 125.9 147 50.3
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 4.6e-27 125.2 163 49.7
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 5.9e-27 124.8 154 50.0
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 7.8e-27 124.4 161 50.9
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.0e-26 124.0 147 49.0
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 1.3e-26 123.6 155 47.1
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 1.3e-26 123.6 153 51.0
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 1.7e-26 123.2 135 47.4
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 3.0e-26 122.5 144 49.3
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 3.0e-26 122.5 156 50.0
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 3.0e-26 122.5 153 47.1
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 3.0e-26 122.5 144 46.5
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 5.0e-26 121.7 162 46.3
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 5.0e-26 121.7 158 50.0
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 6.6e-26 121.3 138 53.6
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 8.6e-26 120.9 138 45.7
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 1.9e-25 119.8 142 46.5
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 3.3e-25 119.0 133 51.1
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 3.3e-25 119.0 172 48.8
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 3.3e-25 119.0 144 49.3
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 3.3e-25 119.0 143 53.1
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 5.6e-25 118.2 148 46.6
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 7.3e-25 117.9 157 45.9
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 9.5e-25 117.5 134 45.5
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.2e-24 117.1 147 44.2
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 1.6e-24 116.7 185 45.9
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 3.6e-24 115.5 140 49.3
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 6.2e-24 114.8 143 49.0
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 8.0e-24 114.4 137 50.4
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 8.0e-24 114.4 184 41.8
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 8.0e-24 114.4 155 47.7
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 1.8e-23 113.2 155 45.8
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 3.1e-23 112.5 148 47.3
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 4.0e-23 112.1 167 42.5
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 4.0e-23 112.1 165 43.0
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 8.9e-23 110.9 142 45.8
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 1.2e-22 110.5 142 45.8
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 2.0e-22 109.8 138 46.4
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 2.6e-22 109.4 138 48.6
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 3.4e-22 109.0 148 43.2
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 3.4e-22 109.0 148 43.9
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 5.8e-22 108.2 143 47.6
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 1.7e-21 106.7 143 44.8
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 2.2e-21 106.3 165 44.8
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 4.9e-21 105.1 120 50.8
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 1.9e-20 103.2 140 49.3
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 4.1e-20 102.1 146 46.6
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 4.1e-20 102.1 142 43.0
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 5.4e-20 101.7 145 45.5
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 7.0e-20 101.3 129 47.3
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 9.2e-20 100.9 147 39.5
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 9.2e-20 100.9 142 43.0
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 9.2e-20 100.9 136 43.4
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 1.6e-19 100.1 132 44.7
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.0e-19 99.8 142 45.1
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 4.6e-19 98.6 149 45.0
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 7.8e-19 97.8 126 42.1
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.0e-18 97.4 142 43.7
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 1.3e-18 97.1 144 42.4
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 5.0e-18 95.1 132 41.7
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 8.6e-18 94.4 169 38.5
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.1e-17 94.0 150 44.0
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 1.1e-17 94.0 144 41.7
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 1.5e-17 93.6 136 41.9
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 1.9e-17 93.2 123 45.5
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.9e-17 93.2 154 41.6
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 5.6e-17 91.7 136 44.1
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 6.2e-16 88.2 90 54.4
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 6.2e-16 88.2 90 54.4
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 1.1e-15 87.4 145 41.4
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 1.8e-15 86.7 121 44.6
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 2.6e-14 82.8 159 40.9
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 2.4e-12 76.3 161 37.9
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 4.6e-11 72.0 80 46.2
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 1.3e-10 70.5 131 38.9
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 1.7e-10 70.1 142 36.6
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.5e-09 66.2 158 38.6
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.5e-09 66.2 144 39.6
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 3.3e-09 65.9 101 45.5
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 5.6e-09 65.1 144 38.9
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 7.3e-09 64.7 87 49.4
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 9.5e-09 64.3 72 50.0
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.1e-08 63.2 144 38.9
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.1e-08 63.2 144 38.9
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 2.1e-08 63.2 77 45.5
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 2.8e-08 62.8 151 38.4
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 1.4e-07 60.5 77 49.4
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 3.4e-06 55.8 68 42.6
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 7.6e-06 54.7 78 41.0


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