Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17579 Brassica carinata HOM05D020862 ORTHO05D000393 2.2e-32 141.7 73 100.0
C01p32930 Brassica napus HOM05D020862 ORTHO05D027434 2.9e-21 104.8 56 94.6
C02p55590 Brassica napus HOM05D020862 ORTHO05D027434 2.9e-21 104.8 56 94.6
BolC2t11615H Brassica oleracea HOM05D020862 ORTHO05D027434 2.9e-21 104.8 56 94.6
BcaC09g49787 Brassica carinata HOM05D020862 ORTHO05D027434 8.6e-21 103.2 56 92.9
BcaC09g50226 Brassica carinata HOM05D020862 ORTHO05D092000 2.1e-19 98.6 56 89.3
BcaC08g46949 Brassica carinata HOM05D000095 ORTHO05D000393 7.5e-17 90.1 52 86.5
BcaC08g46906 Brassica carinata HOM05D000095 ORTHO05D000393 4.9e-16 87.4 53 86.8
BcaC08g46907 Brassica carinata HOM05D000095 ORTHO05D000393 4.9e-16 87.4 53 86.8
A07p40480 Brassica napus HOM05D000095 ORTHO05D000393 4.9e-16 87.4 53 86.8
C06p48850 Brassica napus HOM05D000095 ORTHO05D000393 4.9e-16 87.4 53 86.8
BolC6t39921H Brassica oleracea HOM05D000095 ORTHO05D000393 4.9e-16 87.4 53 86.8
BraA07t31591Z Brassica rapa HOM05D000095 ORTHO05D000393 4.9e-16 87.4 53 86.8
BcaC08g46913 Brassica carinata HOM05D000095 ORTHO05D000393 2.0e-14 82.0 53 83.0
Thhalv10018822m.g Eutrema salsugineum HOM05D000095 ORTHO05D000393 1.1e-12 76.3 59 72.9
CARHR068150 Cardamine hirsuta HOM05D000095 ORTHO05D000393 4.7e-11 70.9 55 67.3
A02p19580 Brassica napus HOM05D000095 ORTHO05D000393 8.0e-11 70.1 56 66.1
Sp5g29970 Schrenkiella parvula HOM05D000095 ORTHO05D000393 1.0e-10 69.7 59 67.8
BraA02t06995Z Brassica rapa HOM05D000095 ORTHO05D000393 1.4e-10 69.3 56 66.1
BcaB05g24873 Brassica carinata HOM05D000095 ORTHO05D000393 1.2e-09 66.2 56 60.7
BcaC03g15530 Brassica carinata HOM05D000095 ORTHO05D000393 4.4e-09 64.3 56 62.5
C02p32120 Brassica napus HOM05D000095 ORTHO05D000393 4.4e-09 64.3 56 62.5
BolC2t09248H Brassica oleracea HOM05D000095 ORTHO05D000393 4.4e-09 64.3 56 62.5
Carub.0002s2162 Capsella rubella HOM05D000095 ORTHO05D000393 1.3e-08 62.8 59 61.0
AL2G34720 Arabidopsis lyrata HOM05D000095 ORTHO05D000393 2.2e-08 62.0 59 61.0
AT1G74840 Arabidopsis thaliana HOM05D000095 ORTHO05D000393 4.1e-07 57.8 59 55.9
Psat4g055040 Pisum sativum HOM05D000095 ORTHO05D000393 1.2e-06 56.2 72 47.2
Aa31LG4G5050 Aethionema arabicum HOM05D000095 ORTHO05D000393 1.6e-06 55.8 78 50.0
THA.LOC104808319 Tarenaya hassleriana HOM05D000095 ORTHO05D000393 1.6e-06 55.8 77 46.8
Medtr4g107230 Medicago truncatula HOM05D000095 ORTHO05D000393 3.5e-06 54.7 72 47.2
TPR.G38375 Trifolium pratense HOM05D000095 ORTHO05D000393 3.5e-06 54.7 70 44.3
Ca_21872_v3 Cicer arietinum L. HOM05D000095 ORTHO05D000393 6.0e-06 53.9 71 46.5


User provided reference genes

Program Settings