Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17449 Brassica carinata HOM05D001735 ORTHO05D001640 2.6e-59 231.9 117 100.0
BolC2t11461H Brassica oleracea HOM05D001735 ORTHO05D001640 7.0e-49 197.2 97 100.0
BcaC03g17442 Brassica carinata HOM05D001735 ORTHO05D001640 5.9e-48 194.1 113 88.5
BolC2t11457H Brassica oleracea HOM05D001735 ORTHO05D001640 1.7e-47 192.6 113 87.6
BcaC03g17444 Brassica carinata HOM05D001735 ORTHO05D001640 1.5e-46 189.5 113 86.7
C02p53920 Brassica napus HOM05D001735 ORTHO05D001640 5.5e-46 187.6 113 85.8
C02p53910 Brassica napus HOM05D001735 ORTHO05D001640 2.0e-43 179.1 113 84.1
A02p35230 Brassica napus HOM05D001735 ORTHO05D001640 3.1e-41 171.8 114 80.7
BraA02t08528Z Brassica rapa HOM05D001735 ORTHO05D001640 3.1e-41 171.8 114 80.7
BcaB07g30172 Brassica carinata HOM05D001735 ORTHO05D001640 3.7e-34 148.3 114 72.8
BcaB07g30177 Brassica carinata HOM05D001735 ORTHO05D001640 1.6e-32 142.9 114 71.1
Sp2g16380 Schrenkiella parvula HOM05D001735 ORTHO05D001640 1.6e-32 142.9 118 66.9
Carub.0005s0550 Capsella rubella HOM05D001735 ORTHO05D001640 6.6e-31 137.5 120 64.2
AT3G27250 Arabidopsis thaliana HOM05D001735 ORTHO05D001640 3.3e-30 135.2 119 63.9
Thhalv10004746m.g Eutrema salsugineum HOM05D001735 ORTHO05D001640 2.1e-29 132.5 116 64.7
A06p41370 Brassica napus HOM05D001735 ORTHO05D001640 2.8e-29 132.1 116 63.8
BraA06t27062Z Brassica rapa HOM05D001735 ORTHO05D001640 2.8e-29 132.1 116 63.8
BcaC06g33839 Brassica carinata HOM05D001735 ORTHO05D001640 2.3e-28 129.0 116 62.9
BolC7t44143H Brassica oleracea HOM05D001735 ORTHO05D001640 2.3e-28 129.0 116 62.9
C07p36300 Brassica napus HOM05D001735 ORTHO05D001640 4.0e-28 128.3 116 62.1
AL5G16420 Arabidopsis lyrata HOM05D001735 ORTHO05D001640 5.2e-28 127.9 117 61.5
BcaC06g31000 Brassica carinata HOM05D001735 ORTHO05D001640 5.2e-28 127.9 115 63.5
CARHR148510 Cardamine hirsuta HOM05D001735 ORTHO05D001640 2.7e-24 115.5 118 59.3
Aa31LG2G5270 Aethionema arabicum HOM05D001735 ORTHO05D001640 1.7e-23 112.8 120 56.7
THA.LOC104825302 Tarenaya hassleriana HOM05D001735 ORTHO05D001640 8.3e-18 94.0 106 53.8
THA.LOC104823973 Tarenaya hassleriana HOM05D001735 ORTHO05D001640 2.3e-15 85.9 104 53.8
THA.LOC104805338 Tarenaya hassleriana HOM05D001735 ORTHO05D001640 6.6e-15 84.3 105 49.5
AT5G40800 Arabidopsis thaliana HOM05D001735 ORTHO05D001640 1.1e-12 77.0 117 47.0
BolC4t26362H Brassica oleracea HOM05D001735 ORTHO05D001640 3.4e-11 72.0 116 47.4
C04p47620 Brassica napus HOM05D001735 ORTHO05D001640 4.4e-11 71.6 116 47.4
BcaB06g27559 Brassica carinata HOM05D001735 ORTHO05D001640 7.5e-11 70.9 102 50.0
AL7G48920 Arabidopsis lyrata HOM05D001735 ORTHO05D001640 1.7e-10 69.7 110 45.5
Carub.0007s3469 Capsella rubella HOM05D001735 ORTHO05D001640 6.4e-10 67.8 119 44.5
Thhalv10028138m.g Eutrema salsugineum HOM05D001735 ORTHO05D001640 6.4e-10 67.8 113 46.9
CARHR213710 Cardamine hirsuta HOM05D001735 ORTHO05D001640 2.4e-09 65.9 116 46.6
A04p13850 Brassica napus HOM05D001735 ORTHO05D001640 3.2e-09 65.5 116 44.8
BraA04t17051Z Brassica rapa HOM05D001735 ORTHO05D001640 3.2e-09 65.5 116 44.8
Aa31LG9G850 Aethionema arabicum HOM05D001735 ORTHO05D001640 2.1e-08 62.8 113 41.6
MD17G1016100 Malus domestica HOM05D001735 ORTHO05D001640 5.6e-06 54.7 106 44.3


User provided reference genes

Program Settings