Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17347 Brassica carinata HOM05D009089 ORTHO05D091279 3.2e-92 341.7 165 100.0
BcaC01g05270 Brassica carinata HOM05D009089 ORTHO05D092645 1.5e-41 173.3 200 55.0
BcaC04g20768 Brassica carinata HOM05D009089 ORTHO05D013779 2.6e-41 172.6 165 60.6
BolC7t46148H Brassica oleracea HOM05D009089 ORTHO05D013779 2.5e-28 129.4 166 47.0
BcaC01g06699 Brassica carinata HOM05D009089 ORTHO05D013779 1.5e-20 103.6 75 70.7
BcaC09g50456 Brassica carinata HOM05D009089 ORTHO05D013779 1.5e-20 103.6 188 40.4
BcaNung02880 Brassica carinata HOM05D009089 ORTHO05D013779 3.3e-20 102.4 75 70.7
BolC8t47658H Brassica oleracea HOM05D009089 ORTHO05D013779 4.3e-20 102.1 164 42.1
BcaC06g35651 Brassica carinata HOM05D009089 ORTHO05D013779 9.6e-20 100.9 75 70.7
BcaC07g37524 Brassica carinata HOM05D009089 ORTHO05D093970 3.6e-19 99.0 186 37.1
BolC4t24273H Brassica oleracea HOM05D009089 ORTHO05D013779 4.8e-19 98.6 166 42.2
BolC3t16007H Brassica oleracea HOM05D009089 ORTHO05D105711 1.4e-18 97.1 52 88.5
BcaC09g50455 Brassica carinata HOM05D009089 ORTHO05D095703 1.8e-18 96.7 51 90.2
BcaC07g37359 Brassica carinata HOM05D009089 ORTHO05D013779 2.4e-18 96.3 54 83.3
BcaC02g10566 Brassica carinata HOM05D009089 ORTHO05D013779 1.5e-17 93.6 53 83.0
BcaC02g10830 Brassica carinata HOM05D009089 ORTHO05D092561 1.5e-17 93.6 51 88.2
BcaC04g20795 Brassica carinata HOM05D009089 ORTHO05D095814 9.9e-17 90.9 50 84.0
BcaC08g45638 Brassica carinata HOM05D009089 ORTHO05D013779 1.7e-16 90.1 53 81.1
BcaC02g10731 Brassica carinata HOM05D009089 ORTHO05D013779 4.9e-16 88.6 53 79.2
BcaC01g02266 Brassica carinata HOM05D009089 ORTHO05D013779 1.1e-15 87.4 56 75.0
BcaB04g17813 Brassica carinata HOM05D009089 ORTHO05D013779 5.5e-15 85.1 52 75.0
BcaB05g23797 Brassica carinata HOM05D009089 ORTHO05D095229 5.5e-15 85.1 52 75.0
BcaB01g01245 Brassica carinata HOM05D009089 ORTHO05D093534 1.2e-14 84.0 52 75.0
BcaB06g26230 Brassica carinata HOM05D009089 ORTHO05D013779 1.3e-13 80.5 64 60.9
BcaB04g19104 Brassica carinata HOM05D009089 ORTHO05D013779 1.1e-12 77.4 64 59.4
BolC4t24336H Brassica oleracea HOM05D009089 ORTHO05D104558 2.1e-11 73.2 105 42.9
BcaB02g06950 Brassica carinata HOM05D009089 ORTHO05D021666 3.1e-10 69.3 47 68.1
BcaB08g35413 Brassica carinata HOM05D009089 ORTHO05D093491 2.0e-09 66.6 43 72.1
BcaC04g20767 Brassica carinata HOM05D009089 ORTHO05D009795 2.6e-09 66.2 122 43.4
BolC4t24802H Brassica oleracea HOM05D031045 ORTHO05D027628 7.6e-09 64.7 40 75.0
BraSC262t45944Z Brassica rapa HOM05D031045 ORTHO05D027628 3.2e-07 59.3 40 67.5
BcaC06g36782 Brassica carinata HOM05D031045 ORTHO05D027628 9.3e-07 57.8 40 70.0
BraA09t38659Z Brassica rapa HOM05D031045 ORTHO05D027628 2.7e-06 56.2 40 65.0
BcaB03g11697 Brassica carinata HOM05D009089 ORTHO05D092475 4.6e-06 55.5 41 58.5


User provided reference genes

Program Settings