Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17341 Brassica carinata HOM05D003421 ORTHO05D003268 8.6e-30 132.9 62 100.0
BcaC02g09958 Brassica carinata HOM05D003421 ORTHO05D003268 4.9e-25 117.1 62 87.1
BolC9t56013H Brassica oleracea HOM05D003421 ORTHO05D003268 4.9e-25 117.1 60 90.0
BcaC04g20029 Brassica carinata HOM05D003421 ORTHO05D003268 1.1e-24 115.9 62 85.5
BcaC01g02215 Brassica carinata HOM05D003421 ORTHO05D003268 1.4e-24 115.5 62 87.1
BcaC02g11147 Brassica carinata HOM05D003421 ORTHO05D003268 1.4e-24 115.5 62 87.1
BcaC07g37712 Brassica carinata HOM05D003421 ORTHO05D003268 2.4e-24 114.8 60 88.3
BcaC09g49043 Brassica carinata HOM05D003421 ORTHO05D032341 3.2e-24 114.4 62 85.5
BraA01t02990Z Brassica rapa HOM05D003421 ORTHO05D003268 7.0e-24 113.2 60 86.7
BcaC07g37387 Brassica carinata HOM05D003421 ORTHO05D003268 2.0e-23 111.7 60 86.7
BcaC05g27016 Brassica carinata HOM05D003421 ORTHO05D003268 2.7e-23 111.3 61 82.0
BcaC07g37372 Brassica carinata HOM05D003421 ORTHO05D003268 2.7e-23 111.3 62 83.9
BolC1t03345H Brassica oleracea HOM05D003421 ORTHO05D003268 5.9e-23 110.2 60 85.0
BcaC06g35898 Brassica carinata HOM05D003421 ORTHO05D003268 7.8e-23 109.8 60 83.3
BolC8t48271H Brassica oleracea HOM05D003421 ORTHO05D003268 7.8e-23 109.8 60 85.0
BcaC02g10622 Brassica carinata HOM05D003421 ORTHO05D003268 1.3e-22 109.0 62 80.6
BcaC03g14472 Brassica carinata HOM05D003421 ORTHO05D003268 1.7e-22 108.6 62 80.6
BcaC03g15821 Brassica carinata HOM05D003421 ORTHO05D003268 1.7e-22 108.6 62 83.9
BcaC07g37580 Brassica carinata HOM05D003421 ORTHO05D003268 2.3e-22 108.2 60 83.3
BcaC03g16315 Brassica carinata HOM05D003421 ORTHO05D003268 3.9e-22 107.5 60 81.7
BcaC05g26484 Brassica carinata HOM05D003421 ORTHO05D003268 5.0e-22 107.1 60 80.0
BcaC07g37396 Brassica carinata HOM05D003421 ORTHO05D003268 8.6e-22 106.3 62 80.6
BolC8t47709H Brassica oleracea HOM05D003421 ORTHO05D003268 1.1e-21 105.9 61 80.3
BcaC07g37042 Brassica carinata HOM05D003421 ORTHO05D003268 1.5e-21 105.5 62 80.6
BcaC08g42803 Brassica carinata HOM05D003421 ORTHO05D003268 1.5e-21 105.5 62 80.6
BcaC06g36481 Brassica carinata HOM05D003421 ORTHO05D003268 2.5e-21 104.8 60 83.3
BcaC08g44321 Brassica carinata HOM05D003421 ORTHO05D003268 2.5e-21 104.8 62 82.3
BolC2t09439H Brassica oleracea HOM05D003421 ORTHO05D003268 2.5e-21 104.8 57 86.0
BcaC01g00163 Brassica carinata HOM05D003421 ORTHO05D003268 4.3e-21 104.0 62 80.6
BcaC04g21074 Brassica carinata HOM05D003421 ORTHO05D003268 4.3e-21 104.0 62 79.0
BcaC09g49665 Brassica carinata HOM05D003421 ORTHO05D003268 4.3e-21 104.0 62 80.6
BcaC06g36358 Brassica carinata HOM05D003421 ORTHO05D003268 1.2e-20 102.4 62 77.4
BraA09t38708Z Brassica rapa HOM05D003421 ORTHO05D027538 1.2e-20 102.4 60 78.3
BcaC09g49965 Brassica carinata HOM05D003421 ORTHO05D003268 2.1e-20 101.7 61 75.4
BcaB06g27295 Brassica carinata HOM05D003421 ORTHO05D003268 2.8e-20 101.3 61 78.7
BcaC02g09956 Brassica carinata HOM05D003421 ORTHO05D003268 2.8e-20 101.3 60 80.0
BcaC05g28706 Brassica carinata HOM05D003421 ORTHO05D003268 3.1e-19 97.8 60 73.3
BcaC03g14425 Brassica carinata HOM05D003421 ORTHO05D003268 6.8e-19 96.7 62 77.4
BcaC06g36669 Brassica carinata HOM05D003421 ORTHO05D003268 6.8e-19 96.7 61 70.5
BcaC04g19039 Brassica carinata HOM05D003421 ORTHO05D003268 1.2e-18 95.9 61 73.8
BcaC03g14509 Brassica carinata HOM05D003421 ORTHO05D003268 2.0e-18 95.1 61 68.9
BolC2t11874H Brassica oleracea HOM05D003421 ORTHO05D003268 2.0e-18 95.1 61 73.8
BolC9t56870H Brassica oleracea HOM05D003421 ORTHO05D003268 2.0e-18 95.1 60 70.0
BcaC07g37663 Brassica carinata HOM05D003421 ORTHO05D003268 2.6e-18 94.7 60 71.7
BcaC01g01906 Brassica carinata HOM05D003421 ORTHO05D003268 3.4e-18 94.4 57 78.9
BcaC05g27244 Brassica carinata HOM05D003421 ORTHO05D003268 3.4e-18 94.4 61 70.5
BcaC04g20094 Brassica carinata HOM05D003421 ORTHO05D003268 1.7e-17 92.0 61 68.9
BcaC09g49635 Brassica carinata HOM05D003421 ORTHO05D003268 1.7e-17 92.0 56 76.8
BcaC02g09957 Brassica carinata HOM05D003421 ORTHO05D003268 2.2e-17 91.7 60 68.3
BolC3t19358H Brassica oleracea HOM05D003421 ORTHO05D003268 2.2e-17 91.7 60 68.3
BcaC07g37601 Brassica carinata HOM05D003421 ORTHO05D003268 2.9e-17 91.3 61 67.2
BcaC03g16470 Brassica carinata HOM05D003421 ORTHO05D003268 3.7e-17 90.9 61 67.2
BcaC04g20964 Brassica carinata HOM05D003421 ORTHO05D003268 4.9e-17 90.5 60 71.7
BcaC07g37154 Brassica carinata HOM05D003421 ORTHO05D003268 4.9e-17 90.5 60 66.7
BcaC02g10494 Brassica carinata HOM05D003421 ORTHO05D003268 6.4e-17 90.1 60 66.7
BcaC05g26223 Brassica carinata HOM05D003421 ORTHO05D003268 6.4e-17 90.1 61 70.5
BcaC05g27698 Brassica carinata HOM05D003421 ORTHO05D003268 6.4e-17 90.1 60 66.7
BcaC06g33795 Brassica carinata HOM05D003421 ORTHO05D003268 6.4e-17 90.1 60 66.7
BcaC05g27768 Brassica carinata HOM05D003421 ORTHO05D003268 8.3e-17 89.7 50 84.0
BcaC02g10425 Brassica carinata HOM05D003421 ORTHO05D003268 1.4e-16 89.0 59 71.2
BcaC02g12085 Brassica carinata HOM05D003421 ORTHO05D003268 2.4e-16 88.2 61 68.9
BcaC02g10249 Brassica carinata HOM05D003421 ORTHO05D039416 3.2e-16 87.8 61 68.9
BcaC05g28228 Brassica carinata HOM05D003421 ORTHO05D003268 5.4e-16 87.0 60 66.7
BcaC08g43758 Brassica carinata HOM05D003421 ORTHO05D003268 5.4e-16 87.0 61 65.6
BcaC02g10760 Brassica carinata HOM05D003421 ORTHO05D003268 7.0e-16 86.7 60 66.7
BcaC09g48534 Brassica carinata HOM05D003421 ORTHO05D003268 9.2e-16 86.3 53 71.7
BolC5t33453H Brassica oleracea HOM05D003421 ORTHO05D003268 6.0e-15 83.6 59 66.1
BcaC04g21545 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-15 83.2 51 74.5
BcaC03g16396 Brassica carinata HOM05D003421 ORTHO05D003268 1.3e-14 82.4 60 65.0
BolC4t24629H Brassica oleracea HOM05D003421 ORTHO05D003268 1.3e-14 82.4 46 80.4
BcaC02g10663 Brassica carinata HOM05D003421 ORTHO05D003268 3.0e-14 81.3 50 76.0
BcaC09g49028 Brassica carinata HOM05D003421 ORTHO05D003268 3.9e-14 80.9 53 73.6
BolC3t19281H Brassica oleracea HOM05D003421 ORTHO05D003268 5.0e-14 80.5 60 63.3
BcaC07g37491 Brassica carinata HOM05D003421 ORTHO05D011880 1.1e-13 79.3 59 61.0
BolC2t09874H Brassica oleracea HOM05D003421 ORTHO05D003268 1.1e-13 79.3 59 62.7
BcaC03g15143 Brassica carinata HOM05D003421 ORTHO05D003268 1.9e-13 78.6 44 79.5
BcaC02g10561 Brassica carinata HOM05D003421 ORTHO05D003268 2.5e-13 78.2 62 61.3
BcaC09g49669 Brassica carinata HOM05D003421 ORTHO05D003268 3.3e-13 77.8 44 81.8
BcaC06g36330 Brassica carinata HOM05D003421 ORTHO05D003268 7.3e-13 76.6 62 62.9
BolC4t25137H Brassica oleracea HOM05D003421 ORTHO05D003268 1.6e-12 75.5 62 56.5
BcaB01g01106 Brassica carinata HOM05D003421 ORTHO05D003268 2.8e-12 74.7 60 53.3
BolC7t42082H Brassica oleracea HOM05D003421 ORTHO05D003268 1.4e-11 72.4 47 66.0
BcaC08g45220 Brassica carinata HOM05D003421 ORTHO05D003268 2.3e-11 71.6 40 77.5
BcaB05g23443 Brassica carinata HOM05D003421 ORTHO05D003268 5.2e-11 70.5 56 55.4
BcaC08g44083 Brassica carinata HOM05D003421 ORTHO05D003268 5.2e-11 70.5 39 82.1
BcaC03g17358 Brassica carinata HOM05D003421 ORTHO05D003268 6.8e-11 70.1 42 73.8
BraA01t02722Z Brassica rapa HOM05D003421 ORTHO05D003268 3.4e-10 67.8 57 54.4
BolC5t31957H Brassica oleracea HOM05D003421 ORTHO05D003268 1.7e-09 65.5 60 55.0
BolC8t47514H Brassica oleracea HOM05D003421 ORTHO05D003268 6.4e-09 63.5 56 55.4
BcaC05g27243 Brassica carinata HOM05D003421 ORTHO05D003268 1.1e-08 62.8 46 58.7
BcaB03g16173 Brassica carinata HOM05D003421 ORTHO05D003268 1.9e-08 62.0 45 57.8
BcaC07g37414 Brassica carinata HOM05D003421 ORTHO05D003268 4.1e-08 60.8 37 67.6
BcaC01g02175 Brassica carinata HOM05D003421 ORTHO05D003268 1.2e-07 59.3 42 66.7
BcaC02g10603 Brassica carinata HOM05D003421 ORTHO05D003268 2.1e-07 58.5 29 86.2
BcaC05g28621 Brassica carinata HOM05D003421 ORTHO05D003268 4.6e-07 57.4 59 50.8
BcaC07g37055 Brassica carinata HOM05D003421 ORTHO05D009086 6.0e-07 57.0 60 58.3
BcaC07g37583 Brassica carinata HOM05D008969 ORTHO05D012202 6.0e-07 57.0 60 51.7
BcaC01g01929 Brassica carinata HOM05D008969 ORTHO05D012202 5.1e-06 53.9 58 50.0
BcaC04g20754 Brassica carinata HOM05D008969 ORTHO05D012202 5.1e-06 53.9 58 50.0
BcaNung05737 Brassica carinata HOM05D008969 ORTHO05D012202 5.1e-06 53.9 58 51.7
BcaC06g35213 Brassica carinata HOM05D008969 ORTHO05D012202 8.6e-06 53.1 58 50.0


User provided reference genes

Program Settings