Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17196 Brassica carinata HOM05D065767 ORTHO05D039192 9.9e-52 206.5 101 100.0
C02p51230 Brassica napus HOM05D065767 ORTHO05D039192 9.9e-52 206.5 101 100.0
Sp2g29600 Schrenkiella parvula HOM05D000083 ORTHO05D000196 6.5e-27 124.0 86 72.1
BcaB02g09959 Brassica carinata HOM05D000083 ORTHO05D000196 9.4e-26 120.2 86 73.3
A02p36860 Brassica napus HOM05D000083 ORTHO05D000196 2.1e-25 119.0 87 72.4
BraA02t08678Z Brassica rapa HOM05D000083 ORTHO05D000196 2.1e-25 119.0 87 72.4
BcaC03g17598 Brassica carinata HOM05D000083 ORTHO05D000196 4.6e-25 117.9 87 71.3
A07p16870 Brassica napus HOM05D000083 ORTHO05D000196 1.5e-23 112.8 86 68.6
BraA07t29412Z Brassica rapa HOM05D000083 ORTHO05D000196 1.5e-23 112.8 86 68.6
BcaB02g09960 Brassica carinata HOM05D000083 ORTHO05D000196 6.3e-22 107.5 86 65.1
BcaC06g34787 Brassica carinata HOM05D000083 ORTHO05D000196 6.3e-22 107.5 86 65.1
C07p24680 Brassica napus HOM05D000083 ORTHO05D000196 6.3e-22 107.5 86 65.1
BolC7t42988H Brassica oleracea HOM05D000083 ORTHO05D000196 6.3e-22 107.5 86 65.1
CARHR280570 Cardamine hirsuta HOM05D000083 ORTHO05D000196 2.4e-21 105.5 87 64.4
AT5G67080 Arabidopsis thaliana HOM05D000083 ORTHO05D000196 1.0e-19 100.1 83 62.7
Thhalv10004510m.g Eutrema salsugineum HOM05D000083 ORTHO05D000196 2.9e-19 98.6 84 67.9
AL8G44290 Arabidopsis lyrata HOM05D000083 ORTHO05D000196 3.8e-19 98.2 83 62.7
Carub.0008s2743 Capsella rubella HOM05D000083 ORTHO05D000196 2.5e-18 95.5 83 60.2
THA.LOC104827185 Tarenaya hassleriana HOM05D000083 ORTHO05D000196 2.1e-17 92.4 87 59.8
THA.LOC104819238 Tarenaya hassleriana HOM05D000083 ORTHO05D000196 3.0e-16 88.6 87 55.2
THA.LOC104821254 Tarenaya hassleriana HOM05D000083 ORTHO05D000196 3.9e-16 88.2 89 58.4
Aa31LG1G15600 Aethionema arabicum HOM05D000083 ORTHO05D000196 9.7e-15 83.6 85 52.9
BolC2t11648H Brassica oleracea HOM05D000083 ORTHO05D000196 2.8e-14 82.0 54 75.9
BcaB05g23205 Brassica carinata HOM05D000083 ORTHO05D000196 3.7e-14 81.6 87 52.9
BcaB01g00627 Brassica carinata HOM05D000083 ORTHO05D000196 1.8e-13 79.3 87 51.7
BcaC07g39488 Brassica carinata HOM05D000083 ORTHO05D000196 3.1e-13 78.6 87 50.6
C08p25320 Brassica napus HOM05D000083 ORTHO05D000196 4.1e-13 78.2 87 50.6
BolC8t50154H Brassica oleracea HOM05D000083 ORTHO05D000196 4.1e-13 78.2 87 50.6
Sp5g11870 Schrenkiella parvula HOM05D000083 ORTHO05D000196 3.5e-12 75.1 88 53.4
A09p43320 Brassica napus HOM05D000083 ORTHO05D000196 7.7e-12 73.9 87 50.6
BraA09t39802Z Brassica rapa HOM05D000083 ORTHO05D000196 7.7e-12 73.9 87 50.6
Thhalv10010509m.g Eutrema salsugineum HOM05D000083 ORTHO05D000196 7.7e-12 73.9 87 49.4
A01p24210 Brassica napus HOM05D000083 ORTHO05D000196 1.7e-11 72.8 87 48.3
Carub.0005s1663 Capsella rubella HOM05D000083 ORTHO05D000196 2.9e-11 72.0 87 43.7
Aa31LG4G18550 Aethionema arabicum HOM05D000083 ORTHO05D000196 6.5e-11 70.9 87 49.4
CARHR159780 Cardamine hirsuta HOM05D000083 ORTHO05D000196 6.5e-11 70.9 83 55.4
AT3G50310 Arabidopsis thaliana HOM05D000083 ORTHO05D000196 1.2e-09 66.6 85 47.1
AL5G30440 Arabidopsis lyrata HOM05D000083 ORTHO05D000196 1.6e-09 66.2 84 48.8
Gohir.D11G199800 Gossypium hirsutum HOM05D000083 ORTHO05D000196 1.0e-08 63.5 104 35.6
Gorai.007G213900 Gossypium raimondii HOM05D000083 ORTHO05D000196 1.0e-08 63.5 104 35.6
MSTRG.15385 Avicennia marina HOM05D000083 ORTHO05D000196 2.3e-08 62.4 99 35.4
Gohir.A11G192940 Gossypium hirsutum HOM05D000083 ORTHO05D000196 2.3e-08 62.4 104 35.6
Gohir.D03G023900 Gossypium hirsutum HOM05D000083 ORTHO05D000196 4.4e-07 58.2 84 35.7
Thecc.01G057700 Theobroma cacao HOM05D000083 ORTHO05D000196 7.5e-07 57.4 100 38.0
Thecc.05G201900 Theobroma cacao HOM05D000083 ORTHO05D000196 7.5e-07 57.4 102 35.3
Gorai.003G025400 Gossypium raimondii HOM05D000083 ORTHO05D000196 1.3e-06 56.6 84 35.7
Gohir.A02G156800 Gossypium hirsutum HOM05D000083 ORTHO05D000196 1.7e-06 56.2 84 36.9
Duzib264G0941 Durio zibethinus HOM05D000083 ORTHO05D000196 2.2e-06 55.8 104 33.7
Cpa.g.sc55.140 Carica papaya HOM05D000083 ORTHO05D000196 2.8e-06 55.5 107 35.5
Haze_15387 Corylus avellana HOM05D000083 ORTHO05D000196 6.3e-06 54.3 109 36.7


User provided reference genes

Program Settings