Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17183 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-44 182.6 81 100.0
BolC2t11199H Brassica oleracea HOM05D000589 ORTHO05D001885 2.5e-37 158.3 77 89.6
BcaC02g12212 Brassica carinata HOM05D000589 ORTHO05D001885 9.5e-37 156.4 77 89.6
BcaC09g48351 Brassica carinata HOM05D000209 ORTHO05D001885 9.5e-37 156.4 77 89.6
BcaC05g25277 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-35 152.5 77 88.3
BcaC03g18139 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-30 135.6 73 89.0
BcaC05g24704 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-26 122.1 77 71.4
BolC8t49444H Brassica oleracea HOM05D000589 ORTHO05D001885 9.8e-26 119.8 58 87.9
BcaC07g42449 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-23 110.9 63 71.4
BcaB07g32763 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-22 109.4 60 73.3
BolC3t21112H Brassica oleracea HOM05D000589 ORTHO05D001885 6.6e-22 107.1 63 68.3
BolC5t30704H Brassica oleracea HOM05D000589 ORTHO05D000401 8.6e-22 106.7 63 68.3
BcaC04g20325 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-21 105.1 63 66.7
BcaC08g43983 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-21 105.1 63 65.1
BolC6t36567H Brassica oleracea HOM05D000589 ORTHO05D001885 2.5e-21 105.1 63 65.1
BolC3t14145H Brassica oleracea HOM05D000589 ORTHO05D001885 4.3e-21 104.4 52 78.8
BolC7t46298H Brassica oleracea HOM05D000589 ORTHO05D001885 4.3e-21 104.4 63 66.7
BolC7t43381H Brassica oleracea HOM05D000589 ORTHO05D001885 9.5e-21 103.2 63 65.1
BolC8t49094H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-20 102.8 63 66.7
BcaC05g25220 Brassica carinata HOM05D000589 ORTHO05D001885 3.6e-20 101.3 56 71.4
BolC6t37831H Brassica oleracea HOM05D000589 ORTHO05D001885 4.7e-20 100.9 52 76.9
BolC8t47336H Brassica oleracea HOM05D000589 ORTHO05D000401 4.7e-20 100.9 64 60.9
BcaB05g22170 Brassica carinata HOM05D000589 ORTHO05D001885 8.0e-20 100.1 66 60.6
C07p49130 Brassica napus HOM05D000589 ORTHO05D001885 8.0e-20 100.1 63 63.5
BcaC05g29515 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-19 99.4 60 71.7
BcaC05g28515 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-19 99.0 56 67.9
BcaC08g45778 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-19 99.0 63 65.1
BolC9t59088H Brassica oleracea HOM05D000589 ORTHO05D001885 1.8e-19 99.0 63 63.5
BcaC04g23550 Brassica carinata HOM05D000589 ORTHO05D001885 5.2e-19 97.4 63 61.9
BolC6t38683H Brassica oleracea HOM05D000589 ORTHO05D000401 8.9e-19 96.7 55 69.1
BolC9t57367H Brassica oleracea HOM05D000589 ORTHO05D001885 8.9e-19 96.7 51 74.5
BcaB01g04274 Brassica carinata HOM05D002676 ORTHO05D001885 2.0e-18 95.5 56 66.1
BcaC01g05715 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-18 95.5 55 74.5
BolC6t35247H Brassica oleracea HOM05D000589 ORTHO05D001885 2.6e-18 95.1 56 66.1
BolC9t58427H Brassica oleracea HOM05D000589 ORTHO05D000401 2.6e-18 95.1 56 66.1
BolC4t24673H Brassica oleracea HOM05D000589 ORTHO05D001885 3.4e-18 94.7 55 69.1
BolC1t01662H Brassica oleracea HOM05D000589 ORTHO05D001885 4.4e-18 94.4 59 61.0
BolC3t14691H Brassica oleracea HOM05D000589 ORTHO05D000401 4.4e-18 94.4 55 72.7
BcaC04g21855 Brassica carinata HOM05D000589 ORTHO05D001885 5.8e-18 94.0 63 61.9
BcaC08g45938 Brassica carinata HOM05D000589 ORTHO05D001885 5.8e-18 94.0 60 63.3
BraA09t40543Z Brassica rapa HOM05D000589 ORTHO05D001885 5.8e-18 94.0 55 69.1
A09p69380 Brassica napus HOM05D000696 ORTHO05D001068 7.5e-18 93.6 63 58.7
BolC2t08273H Brassica oleracea HOM05D000589 ORTHO05D000401 7.5e-18 93.6 63 60.3
BolC6t36507H Brassica oleracea HOM05D000589 ORTHO05D001885 7.5e-18 93.6 63 60.3
BolC8t52930H Brassica oleracea HOM05D000696 ORTHO05D001068 7.5e-18 93.6 63 58.7
BolC8t49853H Brassica oleracea HOM05D000589 ORTHO05D001885 9.8e-18 93.2 56 64.3
BcaB06g28622 Brassica carinata HOM05D000888 ORTHO05D000740 1.3e-17 92.8 63 60.3
BolC4t22259H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-17 92.8 52 69.2
BcaB03g15647 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-17 92.4 59 57.6
BcaC04g23115 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-17 92.4 62 62.9
BolC2t12526H Brassica oleracea HOM05D000589 ORTHO05D001885 1.7e-17 92.4 63 60.3
BcaC08g45440 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-17 92.0 70 52.9
BolC3t19562H Brassica oleracea HOM05D000589 ORTHO05D001885 2.2e-17 92.0 65 64.6
BcaB03g12711 Brassica carinata HOM05D000589 ORTHO05D001885 2.9e-17 91.7 63 57.1
BolC1t02802H Brassica oleracea HOM05D000589 ORTHO05D000401 2.9e-17 91.7 64 56.2
BcaC05g28348 Brassica carinata HOM05D000589 ORTHO05D001885 3.7e-17 91.3 56 62.5
C08p03150 Brassica napus HOM05D000930 ORTHO05D000748 3.7e-17 91.3 56 64.3
BolC1t00773H Brassica oleracea HOM05D000589 ORTHO05D001885 4.9e-17 90.9 70 52.9
BcaC02g11017 Brassica carinata HOM05D000589 ORTHO05D001885 8.3e-17 90.1 79 46.8
BolC4t23737H Brassica oleracea HOM05D000589 ORTHO05D001885 8.3e-17 90.1 79 46.8
BcaB02g11384 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-16 89.7 56 66.1
BcaC07g39835 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-16 89.7 59 57.6
BolC7t43826H Brassica oleracea HOM05D000589 ORTHO05D001885 1.1e-16 89.7 59 55.9
BolC7t41896H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-16 89.4 63 57.1
BraA09t38531Z Brassica rapa HOM05D000589 ORTHO05D001885 1.4e-16 89.4 57 59.6
BraA09t39932Z Brassica rapa HOM05D000589 ORTHO05D001885 1.4e-16 89.4 63 55.6
BolC7t44689H Brassica oleracea HOM05D000589 ORTHO05D001885 1.9e-16 89.0 56 60.7
BraA06t25708Z Brassica rapa HOM05D000589 ORTHO05D001885 1.9e-16 89.0 63 58.7
BolC8t48273H Brassica oleracea HOM05D000589 ORTHO05D001885 2.4e-16 88.6 59 55.9
BcaC08g45577 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-16 88.2 59 57.6
BolC9t59154H Brassica oleracea HOM05D000214 ORTHO05D000131 3.2e-16 88.2 59 55.9
BcaB04g19137 Brassica carinata HOM05D000589 ORTHO05D001885 4.1e-16 87.8 61 59.0
BolC4t26960H Brassica oleracea HOM05D000589 ORTHO05D001885 4.1e-16 87.8 56 60.7
BolC5t33392H Brassica oleracea HOM05D000589 ORTHO05D001885 5.4e-16 87.4 63 55.6
BolC9t53328H Brassica oleracea HOM05D000589 ORTHO05D001885 7.0e-16 87.0 56 62.5
CARHR059960 Cardamine hirsuta HOM05D000589 ORTHO05D001885 7.0e-16 87.0 61 57.4
BcaC04g22605 Brassica carinata HOM05D000589 ORTHO05D001885 9.2e-16 86.7 56 60.7
BcaC05g25861 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-15 86.3 56 58.9
BcaB03g14716 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-15 85.5 56 64.3
BcaC01g05146 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-15 85.5 59 55.9
BolC4t25876H Brassica oleracea HOM05D000589 ORTHO05D001885 2.0e-15 85.5 57 56.1
BraA02t07620Z Brassica rapa HOM05D000589 ORTHO05D001885 2.0e-15 85.5 56 60.7
Carub.0007s3075 Capsella rubella HOM05D000589 ORTHO05D001885 3.5e-15 84.7 56 60.7
BolC1t02335H Brassica oleracea HOM05D000589 ORTHO05D001885 4.6e-15 84.3 56 58.9
BolC8t47924H Brassica oleracea HOM05D000589 ORTHO05D000401 4.6e-15 84.3 56 57.1
BraA01t03046Z Brassica rapa HOM05D000589 ORTHO05D001885 4.6e-15 84.3 67 56.7
BcaC09g51508 Brassica carinata HOM05D000589 ORTHO05D001885 7.8e-15 83.6 56 58.9
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 1.0e-14 83.2 67 56.7
BolC2t10463H Brassica oleracea HOM05D000589 ORTHO05D000401 1.0e-14 83.2 57 54.4
Carub.0011s0002 Capsella rubella HOM05D000589 ORTHO05D001885 1.0e-14 83.2 61 54.1
CARHR284490 Cardamine hirsuta HOM05D000589 ORTHO05D001885 1.0e-14 83.2 61 55.7
Carub.0001s4113 Capsella rubella HOM05D000589 ORTHO05D001885 1.3e-14 82.8 57 57.9
Carub.0003s0398 Capsella rubella HOM05D000589 ORTHO05D001885 1.3e-14 82.8 57 57.9
Carub.0007s3079 Capsella rubella HOM05D000589 ORTHO05D001885 1.7e-14 82.4 57 61.4
BcaC04g19067 Brassica carinata HOM05D000589 ORTHO05D001885 2.3e-14 82.0 50 60.0
Carub.0005s0910 Capsella rubella HOM05D000589 ORTHO05D001885 2.3e-14 82.0 56 58.9
BcaB04g18869 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-14 81.6 63 55.6
BcaB08g35560 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-14 81.6 55 56.4
BcaC04g22408 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-14 81.6 55 60.0
C01p30550 Brassica napus HOM05D000589 ORTHO05D001885 3.0e-14 81.6 67 55.2
Carub.0004s0663 Capsella rubella HOM05D000589 ORTHO05D001885 3.0e-14 81.6 56 57.1
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 3.9e-14 81.3 67 55.2
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 3.9e-14 81.3 67 55.2
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 3.9e-14 81.3 67 55.2
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 3.9e-14 81.3 67 55.2
BolC4t25125H Brassica oleracea HOM05D000589 ORTHO05D001885 3.9e-14 81.3 67 55.2
BolC6t38706H Brassica oleracea HOM05D000589 ORTHO05D001885 3.9e-14 81.3 67 55.2
BolC8t49419H Brassica oleracea HOM05D000589 ORTHO05D001885 3.9e-14 81.3 67 55.2
BolC9t57315H Brassica oleracea HOM05D000589 ORTHO05D001885 3.9e-14 81.3 67 55.2
BraA08t32950Z Brassica rapa HOM05D000589 ORTHO05D001885 3.9e-14 81.3 67 55.2
BraA07t28350Z Brassica rapa HOM05D000589 ORTHO05D001885 6.6e-14 80.5 67 55.2
BolC3t12574H Brassica oleracea HOM05D000589 ORTHO05D001885 2.5e-13 78.6 56 57.1
BraA02t07685Z Brassica rapa HOM05D000589 ORTHO05D001885 2.5e-13 78.6 56 57.1
BraA03t14502Z Brassica rapa HOM05D000589 ORTHO05D001885 2.5e-13 78.6 67 53.7
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 3.3e-13 78.2 56 58.9
Carub.0001s3710 Capsella rubella HOM05D000589 ORTHO05D001885 3.3e-13 78.2 56 57.1
C03p80460 Brassica napus HOM05D000589 ORTHO05D001885 4.3e-13 77.8 67 53.7
BolC9t54652H Brassica oleracea HOM05D000589 ORTHO05D001885 4.3e-13 77.8 67 53.7
Carub.0007s3086 Capsella rubella HOM05D000589 ORTHO05D001885 4.3e-13 77.8 56 57.1
BolC3t16945H Brassica oleracea HOM05D000589 ORTHO05D001885 7.3e-13 77.0 57 57.9
BolC3t19856H Brassica oleracea HOM05D000589 ORTHO05D000401 9.5e-13 76.6 56 55.4
BolC3t17893H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-12 76.3 56 55.4
BcaC01g00334 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-12 75.9 56 55.4
BolC9t54041H Brassica oleracea HOM05D000589 ORTHO05D000401 1.6e-12 75.9 56 55.4
BcaB02g07028 Brassica carinata HOM05D000589 ORTHO05D001885 2.8e-12 75.1 69 46.4
BraA03t15289Z Brassica rapa HOM05D000589 ORTHO05D001885 2.8e-12 75.1 67 53.7
BcaB04g20296 Brassica carinata HOM05D000589 ORTHO05D001885 3.6e-12 74.7 59 50.8
BcaB06g25993 Brassica carinata HOM05D000589 ORTHO05D001885 4.7e-12 74.3 56 53.6
BolC1t04845H Brassica oleracea HOM05D000589 ORTHO05D001885 6.2e-12 73.9 56 53.6
BolC4t28438H Brassica oleracea HOM05D000589 ORTHO05D001885 6.2e-12 73.9 46 60.9
BolC1t05118H Brassica oleracea HOM05D000589 ORTHO05D000401 8.1e-12 73.6 56 53.6
BcaC04g22612 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-11 72.8 56 53.6
BcaC04g21787 Brassica carinata HOM05D000589 ORTHO05D001885 3.1e-11 71.6 56 53.6
BolC9t55626H Brassica oleracea HOM05D000589 ORTHO05D001885 3.1e-11 71.6 56 53.6
BraA04t17042Z Brassica rapa HOM05D000589 ORTHO05D001885 4.0e-11 71.2 56 50.0
BcaC05g28077 Brassica carinata HOM05D000589 ORTHO05D001885 5.2e-11 70.9 46 63.0
Carub.0006s2645 Capsella rubella HOM05D000589 ORTHO05D001885 5.2e-11 70.9 77 44.2
BcaC06g33599 Brassica carinata HOM05D000589 ORTHO05D001885 6.8e-11 70.5 56 50.0
BolC7t42526H Brassica oleracea HOM05D000589 ORTHO05D001885 6.8e-11 70.5 52 53.8
Carub.0002s1040 Capsella rubella HOM05D000589 ORTHO05D001885 8.9e-11 70.1 60 50.0
BolC7t42427H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-10 69.7 56 46.4
BraA09t40146Z Brassica rapa HOM05D000589 ORTHO05D001885 2.6e-10 68.6 47 59.6
BolC4t25855H Brassica oleracea HOM05D000589 ORTHO05D001885 7.5e-10 67.0 57 50.9
Carub.0003s1040 Capsella rubella HOM05D000589 ORTHO05D001885 7.5e-10 67.0 56 46.4
AL2G19110 Arabidopsis lyrata HOM05D000589 ORTHO05D001885 1.3e-09 66.2 64 42.2
BcaC05g27662 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-09 66.2 44 63.6
BcaB05g22145 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-09 65.9 63 44.4
BcaC02g11767 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-09 65.9 44 59.1
BcaC03g15169 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-09 65.9 43 58.1
BcaNung00166 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-09 65.9 63 44.4
SpUn1120_0010 Schrenkiella parvula HOM05D017451 ORTHO05D019359 1.7e-09 65.9 59 47.5
BcaC04g22249 Brassica carinata HOM05D000589 ORTHO05D001885 4.9e-09 64.3 65 44.6
Carub.0007s3076 Capsella rubella HOM05D000589 ORTHO05D001885 4.9e-09 64.3 57 45.6
Sp7g08580 Schrenkiella parvula HOM05D017451 ORTHO05D019359 8.3e-09 63.5 59 47.5
SpUn0135_0020 Schrenkiella parvula HOM05D017451 ORTHO05D019359 8.3e-09 63.5 59 47.5
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 1.9e-08 62.4 57 45.6
BcaC05g24705 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-08 62.4 33 75.8
BolC5t29856H Brassica oleracea HOM05D000589 ORTHO05D001885 2.4e-08 62.0 55 54.5
Carub.0008s2840 Capsella rubella HOM05D000589 ORTHO05D001885 2.4e-08 62.0 59 42.4
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 4.1e-08 61.2 67 41.8
SpUn0001_0520 Schrenkiella parvula HOM05D017451 ORTHO05D019359 4.1e-08 61.2 59 44.1
THA.LOC104818502 Tarenaya hassleriana HOM05D007693 ORTHO05D002086 1.6e-07 59.3 56 41.1
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 3.5e-07 58.2 61 42.6
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 3.5e-07 58.2 61 42.6
BcaB06g28252 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-07 57.8 37 62.2
BcaC06g34269 Brassica carinata HOM05D007462 ORTHO05D002086 4.6e-07 57.8 60 43.3
BcaC05g24982 Brassica carinata HOM05D000589 ORTHO05D001885 7.8e-07 57.0 65 47.7
BraA05t22114Z Brassica rapa HOM05D007693 ORTHO05D002086 1.0e-06 56.6 61 42.6
BolC6t36239H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-06 56.2 39 61.5
Carub.0006s3065 Capsella rubella HOM05D023218 ORTHO05D023690 1.3e-06 56.2 60 38.3
BcaC05g29003 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-06 55.8 44 50.0
Carub.0006s2648 Capsella rubella HOM05D000589 ORTHO05D001885 1.7e-06 55.8 50 42.0
BcaC01g04079 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-06 55.1 29 79.3
BcaC04g20658 Brassica carinata HOM05D007462 ORTHO05D002086 3.0e-06 55.1 60 41.7
AL1G59920 Arabidopsis lyrata HOM05D025401 ORTHO05D026774 3.9e-06 54.7 58 41.4
BcaB06g27481 Brassica carinata HOM05D007693 ORTHO05D002086 3.9e-06 54.7 60 40.0
BcaC01g03361 Brassica carinata HOM05D000589 ORTHO05D001885 3.9e-06 54.7 39 64.1
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 5.1e-06 54.3 56 42.9
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 5.1e-06 54.3 56 42.9
BraA05t21229Z Brassica rapa HOM05D007462 ORTHO05D002086 5.1e-06 54.3 59 44.1
Carub.0001s0650 Capsella rubella HOM05D023218 ORTHO05D023690 5.1e-06 54.3 60 36.7
BcaC02g08266 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-06 53.9 37 67.6
BcaC02g10987 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-06 53.9 29 75.9
BcaC09g49265 Brassica carinata HOM05D007462 ORTHO05D002086 8.6e-06 53.5 55 43.6
Thhalv10017745m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 8.6e-06 53.5 57 43.9


User provided reference genes

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