Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17166 Brassica carinata HOM05D029734 ORTHO05D027661 1.0e-30 136.0 63 100.0
C02p50890 Brassica napus HOM05D029734 ORTHO05D027661 1.5e-13 79.0 36 100.0
BolC2t11179H Brassica oleracea HOM05D029734 ORTHO05D027661 1.5e-13 79.0 36 100.0
BraA02t08332Z Brassica rapa HOM05D029734 ORTHO05D027661 1.6e-12 75.5 36 94.4
Sp2g13880 Schrenkiella parvula HOM05D000940 ORTHO05D000782 8.5e-09 63.2 46 67.4
BcaC06g31217 Brassica carinata HOM05D000940 ORTHO05D000782 1.9e-08 62.0 36 75.0
AL5G11990 Arabidopsis lyrata HOM05D000940 ORTHO05D000782 2.5e-08 61.6 36 77.8
AT2G02780 Arabidopsis thaliana HOM05D000940 ORTHO05D000782 2.5e-08 61.6 36 77.8
Carub.0005s0169 Capsella rubella HOM05D000940 ORTHO05D000782 2.5e-08 61.6 36 77.8
Thhalv10003702m.g Eutrema salsugineum HOM05D000940 ORTHO05D000782 3.2e-08 61.2 36 75.0
Aa31LG2G7490 Aethionema arabicum HOM05D000940 ORTHO05D000782 4.2e-08 60.8 36 77.8
BcaC06g34041 Brassica carinata HOM05D000940 ORTHO05D000782 1.6e-07 58.9 36 72.2
A06p43490 Brassica napus HOM05D000940 ORTHO05D000782 1.6e-07 58.9 36 72.2
C07p33380 Brassica napus HOM05D000940 ORTHO05D000782 1.6e-07 58.9 36 72.2
BolC7t43847H Brassica oleracea HOM05D000940 ORTHO05D000782 1.6e-07 58.9 36 72.2
BraA06t27234Z Brassica rapa HOM05D000940 ORTHO05D000782 1.6e-07 58.9 36 72.2
CARHR145220 Cardamine hirsuta HOM05D000940 ORTHO05D000782 1.8e-06 55.5 36 69.4


User provided reference genes

Program Settings