Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17162 Brassica carinata HOM05D010352 ORTHO05D031768 1.0e-34 149.4 70 100.0
BolC2t11170H Brassica oleracea HOM05D010352 ORTHO05D031768 1.0e-34 149.4 70 100.0
BraA09t40823Z Brassica rapa HOM05D010352 ORTHO05D012062 3.3e-22 107.8 64 70.3
BraA02t08327Z Brassica rapa HOM05D010352 ORTHO05D012062 5.3e-20 100.5 64 70.3
BcaC03g17158 Brassica carinata HOM05D010352 ORTHO05D031768 6.9e-20 100.1 63 71.4
BcaC07g42627 Brassica carinata HOM05D010352 ORTHO05D012062 6.9e-20 100.1 59 71.2
BolC4t24609H Brassica oleracea HOM05D001456 ORTHO05D012062 1.7e-18 95.5 64 65.6
BcaC02g10275 Brassica carinata HOM05D001456 ORTHO05D012062 5.0e-18 94.0 64 64.1
C04p30870 Brassica napus HOM05D001456 ORTHO05D012062 5.0e-18 94.0 64 64.1
A09p54100 Brassica napus HOM05D010352 ORTHO05D012062 6.5e-18 93.6 57 71.9
Carub.0005s2878 Capsella rubella HOM05D001456 ORTHO05D012062 5.5e-17 90.5 62 61.3
A02p33060 Brassica napus HOM05D010352 ORTHO05D012062 7.2e-17 90.1 57 70.2
C02p50830 Brassica napus HOM05D010352 ORTHO05D012062 1.2e-16 89.4 55 72.7
BolC2t11165H Brassica oleracea HOM05D010352 ORTHO05D012062 3.6e-16 87.8 64 65.6
AL5G44650 Arabidopsis lyrata HOM05D001456 ORTHO05D012062 4.4e-14 80.9 63 54.0
A09p54110 Brassica napus HOM05D010352 ORTHO05D012062 4.4e-14 80.9 65 53.8
BraA09t40825Z Brassica rapa HOM05D010352 ORTHO05D012062 4.4e-14 80.9 65 53.8
AT3G62050 Arabidopsis thaliana HOM05D001456 ORTHO05D012062 1.3e-13 79.3 62 51.6
BcaC03g17159 Brassica carinata HOM05D010352 ORTHO05D012062 1.7e-13 79.0 59 64.4
BcaC07g42628 Brassica carinata HOM05D010352 ORTHO05D012062 1.8e-12 75.5 62 53.2
C08p36990 Brassica napus HOM05D010352 ORTHO05D012062 5.3e-12 73.9 65 49.2
BolC2t11166H Brassica oleracea HOM05D010352 ORTHO05D012062 7.0e-12 73.6 62 61.3
BcaNung02251 Brassica carinata HOM05D001456 ORTHO05D012062 1.0e-10 69.7 64 50.0
BcaC02g08726 Brassica carinata HOM05D001456 ORTHO05D031976 2.9e-10 68.2 55 54.5
C04p51270 Brassica napus HOM05D001456 ORTHO05D031976 2.9e-10 68.2 55 54.5
BolC4t26717H Brassica oleracea HOM05D001456 ORTHO05D031976 2.9e-10 68.2 55 54.5
CARHR150720 Cardamine hirsuta HOM05D001456 ORTHO05D012062 1.0e-07 59.7 65 38.5
BcaB02g09846 Brassica carinata HOM05D001165 ORTHO05D001347 2.3e-07 58.5 69 37.7
C02p17550 Brassica napus HOM05D001636 ORTHO05D009134 4.0e-07 57.8 58 43.1
BcaC03g14332 Brassica carinata HOM05D001636 ORTHO05D009134 5.2e-07 57.4 58 43.1
C02p17520 Brassica napus HOM05D001636 ORTHO05D009134 5.2e-07 57.4 58 43.1
BolC2t07887H Brassica oleracea HOM05D001636 ORTHO05D009134 5.2e-07 57.4 58 43.1
BolC8t51127H Brassica oleracea HOM05D001456 ORTHO05D011781 5.2e-07 57.4 53 45.3
BcaC03g14330 Brassica carinata HOM05D001636 ORTHO05D009134 6.7e-07 57.0 58 43.1
BcaB02g09721 Brassica carinata HOM05D001636 ORTHO05D009134 1.2e-06 56.2 69 36.2
A09p52590 Brassica napus HOM05D001456 ORTHO05D011781 3.3e-06 54.7 50 46.0
C08p35340 Brassica napus HOM05D001456 ORTHO05D011781 3.3e-06 54.7 50 46.0
PGSC0003DMG400001457 Solanum tuberosum HOM05D001456 ORTHO05D002799 4.4e-06 54.3 55 36.4
BcaB03g15112 Brassica carinata HOM05D001636 ORTHO05D009134 5.7e-06 53.9 58 39.7
A09p52620 Brassica napus HOM05D001456 ORTHO05D011781 7.5e-06 53.5 47 44.7
BraA09t40689Z Brassica rapa HOM05D001456 ORTHO05D011781 7.5e-06 53.5 50 44.0
Thhalv10027969m.g Eutrema salsugineum HOM05D001456 ORTHO05D011781 7.5e-06 53.5 55 41.8
BcaC03g15053 Brassica carinata HOM05D001636 ORTHO05D009134 9.7e-06 53.1 50 46.0
BcaC06g31371 Brassica carinata HOM05D001636 ORTHO05D009134 9.7e-06 53.1 50 46.0
C02p25960 Brassica napus HOM05D001636 ORTHO05D009134 9.7e-06 53.1 50 46.0
BolC2t08674H Brassica oleracea HOM05D001636 ORTHO05D009134 9.7e-06 53.1 50 46.0
CARHR172550 Cardamine hirsuta HOM05D001456 ORTHO05D002799 9.7e-06 53.1 56 35.7


User provided reference genes

Program Settings