Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17084 Brassica carinata HOM05D007462 ORTHO05D011074 5.6e-66 254.2 137 100.0
BcaC04g22963 Brassica carinata HOM05D007462 ORTHO05D011074 3.0e-59 231.9 137 91.2
BolC9t54236H Brassica oleracea HOM05D007462 ORTHO05D011074 3.0e-59 231.9 137 91.2
BcaC06g33699 Brassica carinata HOM05D007462 ORTHO05D011074 1.1e-58 229.9 137 91.2
BcaC08g44148 Brassica carinata HOM05D007462 ORTHO05D011074 1.5e-58 229.6 137 90.5
BcaC01g04891 Brassica carinata HOM05D007462 ORTHO05D011074 1.4e-56 223.0 137 89.8
BcaC04g23556 Brassica carinata HOM05D007462 ORTHO05D011074 3.0e-51 205.3 137 85.4
BcaNung00058 Brassica carinata HOM05D007462 ORTHO05D011074 3.2e-37 158.7 134 62.7
BcaB03g16439 Brassica carinata HOM05D007462 ORTHO05D011074 1.2e-31 140.2 131 59.5
BcaC05g26662 Brassica carinata HOM05D007462 ORTHO05D011074 1.3e-25 120.2 133 51.1
BcaC01g05867 Brassica carinata HOM05D007462 ORTHO05D011074 2.8e-25 119.0 132 48.5
BcaC04g22910 Brassica carinata HOM05D007462 ORTHO05D011074 2.8e-25 119.0 132 48.5
BcaC07g38352 Brassica carinata HOM05D007462 ORTHO05D011074 2.8e-25 119.0 132 48.5
BcaC03g14143 Brassica carinata HOM05D007462 ORTHO05D011074 6.3e-25 117.9 129 48.1
BcaC08g42872 Brassica carinata HOM05D007462 ORTHO05D011074 1.1e-24 117.1 132 50.0
BolC1t02623H Brassica oleracea HOM05D007462 ORTHO05D011074 1.4e-24 116.7 132 47.0
BcaC03g14861 Brassica carinata HOM05D007462 ORTHO05D011074 2.4e-24 115.9 132 49.2
BcaC08g45815 Brassica carinata HOM05D007462 ORTHO05D011074 2.4e-24 115.9 132 48.5
BcaC05g28653 Brassica carinata HOM05D007462 ORTHO05D011074 4.1e-24 115.2 132 47.0
BcaC07g38572 Brassica carinata HOM05D007462 ORTHO05D011074 1.2e-23 113.6 124 48.4
BcaC01g01799 Brassica carinata HOM05D007462 ORTHO05D011074 1.3e-22 110.2 132 47.7
BcaB04g17468 Brassica carinata HOM05D007462 ORTHO05D011074 1.7e-22 109.8 137 47.4
AT1G48285 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 1.1e-21 107.1 143 44.8
AT2G37125 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 1.9e-21 106.3 128 47.7
BcaC02g11566 Brassica carinata HOM05D007462 ORTHO05D011074 2.5e-21 105.9 132 46.2
CARHR258030 Cardamine hirsuta HOM05D007462 ORTHO05D011074 4.7e-20 101.7 132 43.9
BolC6t36730H Brassica oleracea HOM05D007462 ORTHO05D011074 8.0e-20 100.9 53 90.6
BolC3t21233H Brassica oleracea HOM05D007462 ORTHO05D011074 6.8e-19 97.8 132 43.9
BcaC09g50767 Brassica carinata HOM05D007462 ORTHO05D011074 1.2e-18 97.1 117 45.3
CARHR264280 Cardamine hirsuta HOM05D007462 ORTHO05D011074 2.0e-18 96.3 136 41.2
AT3G30165 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 2.6e-18 95.9 74 55.4
BcaB07g32457 Brassica carinata HOM05D007462 ORTHO05D002086 4.4e-18 95.1 112 45.5
Carub.0012s0017 Capsella rubella HOM05D007462 ORTHO05D011074 6.3e-17 91.3 108 45.4
CARHR217030 Cardamine hirsuta HOM05D007462 ORTHO05D011074 1.8e-16 89.7 90 44.4
BcaB04g19811 Brassica carinata HOM05D007462 ORTHO05D002086 5.3e-16 88.2 114 46.5
BcaB05g21840 Brassica carinata HOM05D004402 ORTHO05D005314 1.6e-15 86.7 112 36.6
BcaC04g20023 Brassica carinata HOM05D007462 ORTHO05D011074 6.5e-14 81.3 112 43.8
BcaC02g08626 Brassica carinata HOM05D007462 ORTHO05D011074 9.4e-13 77.4 129 40.3
BolC7t44542H Brassica oleracea HOM05D007462 ORTHO05D011074 6.8e-11 71.2 56 58.9
BcaB04g17689 Brassica carinata HOM05D007462 ORTHO05D002086 1.5e-10 70.1 93 37.6
C04p58390 Brassica napus HOM05D007462 ORTHO05D002086 2.0e-10 69.7 95 35.8
BcaB02g10757 Brassica carinata HOM05D007462 ORTHO05D002086 3.4e-10 68.9 96 35.4
BolC4t27363H Brassica oleracea HOM05D007462 ORTHO05D002086 5.7e-10 68.2 95 33.7
BcaB06g26738 Brassica carinata HOM05D007462 ORTHO05D002086 7.5e-10 67.8 95 36.8
BcaC04g20658 Brassica carinata HOM05D007462 ORTHO05D002086 7.5e-10 67.8 86 40.7
BcaC09g49265 Brassica carinata HOM05D007462 ORTHO05D002086 7.5e-10 67.8 95 38.9
BraA02t08314Z Brassica rapa HOM05D007462 ORTHO05D002086 7.5e-10 67.8 85 40.0
BraA05t21229Z Brassica rapa HOM05D007462 ORTHO05D002086 1.7e-09 66.6 83 38.6
BraA01t02729Z Brassica rapa HOM05D007462 ORTHO05D002086 2.2e-09 66.2 84 39.3
BolC6t36760H Brassica oleracea HOM05D007462 ORTHO05D002086 3.7e-09 65.5 82 39.0
BcaC05g25404 Brassica carinata HOM05D007462 ORTHO05D011074 4.8e-09 65.1 132 36.4
BcaC01g03692 Brassica carinata HOM05D007462 ORTHO05D002086 6.3e-09 64.7 94 38.3
BcaC03g15594 Brassica carinata HOM05D000675 ORTHO05D002086 6.3e-09 64.7 91 39.6
BcaC06g34269 Brassica carinata HOM05D007462 ORTHO05D002086 6.3e-09 64.7 94 38.3
BcaC08g44171 Brassica carinata HOM05D007462 ORTHO05D002086 6.3e-09 64.7 82 39.0
BolC4t26247H Brassica oleracea HOM05D007462 ORTHO05D002086 6.3e-09 64.7 86 38.4
BcaC04g21573 Brassica carinata HOM05D007462 ORTHO05D002086 8.3e-09 64.3 93 37.6
BcaC05g25361 Brassica carinata HOM05D000675 ORTHO05D002086 1.4e-08 63.5 82 41.5
BcaC05g27596 Brassica carinata HOM05D000675 ORTHO05D002086 1.4e-08 63.5 91 39.6
BcaC05g25703 Brassica carinata HOM05D000675 ORTHO05D002086 1.8e-08 63.2 91 38.5
BcaC08g42855 Brassica carinata HOM05D000675 ORTHO05D002086 1.8e-08 63.2 91 38.5
BcaB05g24191 Brassica carinata HOM05D000675 ORTHO05D002086 2.4e-08 62.8 92 39.1
C02p52100 Brassica napus HOM05D007462 ORTHO05D002086 2.4e-08 62.8 86 38.4
BolC6t38866H Brassica oleracea HOM05D000675 ORTHO05D002086 2.4e-08 62.8 83 34.9
BolC8t46873H Brassica oleracea HOM05D000675 ORTHO05D002086 2.4e-08 62.8 102 31.4
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 3.1e-08 62.4 80 43.8
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 3.1e-08 62.4 86 38.4
AT2G06265 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 4.1e-08 62.0 128 33.6
BcaC03g13628 Brassica carinata HOM05D007462 ORTHO05D011074 4.1e-08 62.0 132 34.8
C06p32590 Brassica napus HOM05D000675 ORTHO05D039852 4.1e-08 62.0 92 40.2
BcaC04g22824 Brassica carinata HOM05D000675 ORTHO05D002086 5.4e-08 61.6 89 38.2
Thhalv10029337m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 5.4e-08 61.6 73 46.6
BraA03t15123Z Brassica rapa HOM05D000675 ORTHO05D002086 7.0e-08 61.2 110 29.1
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 9.1e-08 60.8 99 41.4
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 9.1e-08 60.8 99 41.4
BcaC05g28128 Brassica carinata HOM05D007462 ORTHO05D002086 9.1e-08 60.8 90 36.7
BolC3t19061H Brassica oleracea HOM05D007462 ORTHO05D002086 9.1e-08 60.8 73 42.5
BraA01t02125Z Brassica rapa HOM05D007462 ORTHO05D002086 9.1e-08 60.8 93 34.4
BcaB07g32446 Brassica carinata HOM05D007462 ORTHO05D092196 1.2e-07 60.5 113 36.3
BcaC02g11404 Brassica carinata HOM05D000675 ORTHO05D002086 1.2e-07 60.5 90 37.8
BcaC02g11886 Brassica carinata HOM05D007462 ORTHO05D002086 1.2e-07 60.5 83 37.3
BcaC08g44362 Brassica carinata HOM05D000675 ORTHO05D002086 1.2e-07 60.5 91 42.9
BcaC09g48980 Brassica carinata HOM05D000675 ORTHO05D002086 1.2e-07 60.5 91 37.4
BcaC09g48982 Brassica carinata HOM05D000675 ORTHO05D002086 1.2e-07 60.5 91 37.4
BcaC03g16749 Brassica carinata HOM05D000675 ORTHO05D002086 1.6e-07 60.1 91 37.4
BolC2t08565H Brassica oleracea HOM05D007462 ORTHO05D002086 1.6e-07 60.1 73 41.1
THA.LOC104817596 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 2.0e-07 59.7 95 37.9
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 2.7e-07 59.3 104 33.7
C04p27870 Brassica napus HOM05D000675 ORTHO05D032657 2.7e-07 59.3 103 29.1
BolC4t24330H Brassica oleracea HOM05D000675 ORTHO05D032657 2.7e-07 59.3 103 29.1
BraA05t20011Z Brassica rapa HOM05D007462 ORTHO05D002086 2.7e-07 59.3 83 36.1
Thhalv10003330m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.7e-07 59.3 65 44.6
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 3.5e-07 58.9 108 33.3
BcaC05g29029 Brassica carinata HOM05D000675 ORTHO05D002086 3.5e-07 58.9 90 36.7
BcaC09g51679 Brassica carinata HOM05D000675 ORTHO05D002086 3.5e-07 58.9 102 30.4
BcaC03g17117 Brassica carinata HOM05D007462 ORTHO05D091051 4.5e-07 58.5 112 36.6
BcaC05g28481 Brassica carinata HOM05D000675 ORTHO05D002086 4.5e-07 58.5 91 36.3
BolC4t23751H Brassica oleracea HOM05D007462 ORTHO05D105210 4.5e-07 58.5 73 37.0
BcaB01g01312 Brassica carinata HOM05D000675 ORTHO05D003044 5.9e-07 58.2 124 34.7
BcaB03g14368 Brassica carinata HOM05D000675 ORTHO05D002086 5.9e-07 58.2 90 34.4
BcaB04g17832 Brassica carinata HOM05D007693 ORTHO05D002086 5.9e-07 58.2 75 45.3
BcaB04g18535 Brassica carinata HOM05D000675 ORTHO05D002086 5.9e-07 58.2 109 36.7
BcaC01g02140 Brassica carinata HOM05D007462 ORTHO05D002086 5.9e-07 58.2 66 43.9
BcaC03g14558 Brassica carinata HOM05D000675 ORTHO05D002086 5.9e-07 58.2 91 39.6
BcaC09g49807 Brassica carinata HOM05D000675 ORTHO05D002086 5.9e-07 58.2 90 34.4
Aa31LG2G13790 Aethionema arabicum HOM05D007462 ORTHO05D002086 1.0e-06 57.4 131 32.8
BcaB04g17253 Brassica carinata HOM05D000977 ORTHO05D001094 1.0e-06 57.4 88 38.6
BcaC07g37477 Brassica carinata HOM05D007462 ORTHO05D002086 1.0e-06 57.4 74 40.5
BolC8t47797H Brassica oleracea HOM05D007462 ORTHO05D002086 1.0e-06 57.4 74 40.5
BcaB01g03291 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-06 57.0 109 34.9
BcaB04g16996 Brassica carinata HOM05D000675 ORTHO05D002086 1.3e-06 57.0 105 31.4
CARHR159730 Cardamine hirsuta HOM05D000675 ORTHO05D002086 1.3e-06 57.0 93 32.3
THA.LOC104804713 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 1.3e-06 57.0 94 37.2
BcaC03g14636 Brassica carinata HOM05D007693 ORTHO05D002086 1.7e-06 56.6 57 49.1
BcaC03g14955 Brassica carinata HOM05D007462 ORTHO05D002086 1.7e-06 56.6 66 42.4
BcaC08g45574 Brassica carinata HOM05D000675 ORTHO05D039852 1.7e-06 56.6 92 39.1
BcaC09g51285 Brassica carinata HOM05D000675 ORTHO05D002086 1.7e-06 56.6 129 31.8
C01p14800 Brassica napus HOM05D000675 ORTHO05D002086 1.7e-06 56.6 129 31.8
BraA10t42989Z Brassica rapa HOM05D007693 ORTHO05D002086 1.7e-06 56.6 125 32.8
CARHR148640 Cardamine hirsuta HOM05D000675 ORTHO05D002086 1.7e-06 56.6 88 37.5
BcaB02g11355 Brassica carinata HOM05D007462 ORTHO05D002086 2.3e-06 56.2 93 36.6
BcaB05g24177 Brassica carinata HOM05D000675 ORTHO05D000395 2.3e-06 56.2 104 31.7
BcaB06g26026 Brassica carinata HOM05D007693 ORTHO05D002086 2.3e-06 56.2 75 45.3
BcaB08g35730 Brassica carinata HOM05D000675 ORTHO05D002086 2.3e-06 56.2 109 35.8
BcaC02g07772 Brassica carinata HOM05D007462 ORTHO05D002086 2.3e-06 56.2 66 42.4
BcaC03g15871 Brassica carinata HOM05D007462 ORTHO05D011074 2.3e-06 56.2 46 58.7
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 2.3e-06 56.2 58 48.3
BolC1t01191H Brassica oleracea HOM05D007462 ORTHO05D002086 2.3e-06 56.2 73 39.7
CARHR263710 Cardamine hirsuta HOM05D000675 ORTHO05D002086 2.3e-06 56.2 93 34.4
BcaB04g19206 Brassica carinata HOM05D000675 ORTHO05D003044 2.9e-06 55.8 91 35.2
BcaB07g31602 Brassica carinata HOM05D000675 ORTHO05D000395 2.9e-06 55.8 103 35.0
BcaB08g34442 Brassica carinata HOM05D007693 ORTHO05D002086 2.9e-06 55.8 57 50.9
BcaC05g27351 Brassica carinata HOM05D000675 ORTHO05D002086 2.9e-06 55.8 109 34.9
BcaC05g28311 Brassica carinata HOM05D007693 ORTHO05D002086 2.9e-06 55.8 57 50.9
BcaC05g29744 Brassica carinata HOM05D007693 ORTHO05D002086 2.9e-06 55.8 57 49.1
BcaC06g32504 Brassica carinata HOM05D007693 ORTHO05D002086 2.9e-06 55.8 57 49.1
BcaB08g34481 Brassica carinata HOM05D000675 ORTHO05D002086 3.8e-06 55.5 81 37.0
BcaC03g16220 Brassica carinata HOM05D000675 ORTHO05D002086 3.8e-06 55.5 96 37.5
BcaC03g18180 Brassica carinata HOM05D000675 ORTHO05D002086 3.8e-06 55.5 105 31.4
BcaC06g34450 Brassica carinata HOM05D000675 ORTHO05D002086 3.8e-06 55.5 90 36.7
A05p23380 Brassica napus HOM05D000675 ORTHO05D002086 3.8e-06 55.5 128 30.5
CARHR117010 Cardamine hirsuta HOM05D007462 ORTHO05D011074 3.8e-06 55.5 48 54.2
BcaC01g02056 Brassica carinata HOM05D007462 ORTHO05D002086 5.0e-06 55.1 93 35.5
BcaC04g21270 Brassica carinata HOM05D007462 ORTHO05D002086 5.0e-06 55.1 76 38.2
BcaC06g36027 Brassica carinata HOM05D007462 ORTHO05D002086 5.0e-06 55.1 66 40.9
C07p06000 Brassica napus HOM05D007693 ORTHO05D002086 5.0e-06 55.1 89 38.2
BolC4t25850H Brassica oleracea HOM05D000675 ORTHO05D002086 5.0e-06 55.1 91 35.2
BolC7t41011H Brassica oleracea HOM05D007693 ORTHO05D002086 5.0e-06 55.1 89 38.2
Thhalv10012038m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 5.0e-06 55.1 86 40.7
BcaB04g20521 Brassica carinata HOM05D007693 ORTHO05D002086 6.6e-06 54.7 98 33.7
BcaC01g00337 Brassica carinata HOM05D000977 ORTHO05D001094 6.6e-06 54.7 103 34.0
BolC4t25141H Brassica oleracea HOM05D000675 ORTHO05D000395 6.6e-06 54.7 90 34.4
BolC6t35504H Brassica oleracea HOM05D000675 ORTHO05D002086 6.6e-06 54.7 86 31.4
Sp5g15320 Schrenkiella parvula HOM05D007693 ORTHO05D002086 6.6e-06 54.7 102 37.3
BcaB02g10221 Brassica carinata HOM05D007693 ORTHO05D002086 8.6e-06 54.3 57 49.1
BcaB03g15657 Brassica carinata HOM05D000675 ORTHO05D002086 8.6e-06 54.3 82 39.0
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 8.6e-06 54.3 91 34.1
A05p09860 Brassica napus HOM05D000675 ORTHO05D002086 8.6e-06 54.3 105 32.4
BolC4t23471H Brassica oleracea HOM05D007462 ORTHO05D002086 8.6e-06 54.3 65 44.6
BolC5t31613H Brassica oleracea HOM05D000675 ORTHO05D002086 8.6e-06 54.3 61 44.3
BraA05t21202Z Brassica rapa HOM05D000675 ORTHO05D000395 8.6e-06 54.3 124 28.2
BraA07t28690Z Brassica rapa HOM05D007462 ORTHO05D002086 8.6e-06 54.3 80 36.2


User provided reference genes

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