Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17066 Brassica carinata HOM05D000496 ORTHO05D032289 3.8e-44 181.0 85 100.0
BcaC09g48800 Brassica carinata HOM05D000496 ORTHO05D000411 9.9e-37 156.4 87 88.5
BcaC09g49480 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-25 119.0 69 75.4
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-25 118.2 69 75.4
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-25 117.9 69 72.5
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-24 115.9 69 73.9
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-24 115.9 70 75.7
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-24 115.9 69 76.8
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-24 114.8 69 72.5
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 4.3e-24 114.4 69 73.9
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-24 114.4 69 73.9
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 4.3e-24 114.4 69 73.9
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 4.3e-24 114.4 69 73.9
BcaC05g28639 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-23 112.1 67 73.1
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-23 111.3 70 72.9
BcaC06g34564 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-23 111.3 69 73.9
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-23 111.3 69 72.5
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 4.8e-23 110.9 75 66.7
BolC2t10251H Brassica oleracea HOM05D000496 ORTHO05D000411 8.2e-23 110.2 69 73.9
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-22 109.8 69 71.0
BcaC04g21194 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-22 108.6 64 75.0
BcaC08g43453 Brassica carinata HOM05D000496 ORTHO05D031880 2.4e-22 108.6 69 68.1
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 2.4e-22 108.6 69 68.1
BcaC01g03438 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-22 108.2 69 73.9
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-22 108.2 69 69.6
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-22 107.1 69 72.5
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 9.0e-22 106.7 68 70.6
C09p62330 Brassica napus HOM05D058036 ORTHO05D032289 9.0e-22 106.7 68 70.6
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-21 105.9 69 69.6
C09p21780 Brassica napus HOM05D000496 ORTHO05D000411 2.6e-21 105.1 70 67.1
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-21 104.8 59 78.0
BcaC06g35070 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-21 104.8 69 69.6
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 5.8e-21 104.0 69 72.5
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-21 103.6 69 72.5
BolC3t17901H Brassica oleracea HOM05D000496 ORTHO05D000411 7.6e-21 103.6 69 72.5
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-20 102.4 70 65.7
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-20 102.1 69 65.2
BolC7t44304H Brassica oleracea HOM05D000496 ORTHO05D027466 4.9e-20 100.9 65 69.2
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-19 98.6 84 60.7
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 5.5e-19 97.4 69 63.8
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-18 95.1 52 76.9
BolC9t55777H Brassica oleracea HOM05D000496 ORTHO05D000411 4.6e-18 94.4 69 69.6
BcaB01g02810 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-17 93.2 66 60.6
BcaC01g02150 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-17 91.3 48 77.1
C05p49720 Brassica napus HOM05D000496 ORTHO05D000411 1.9e-16 89.0 66 66.7
BolC6t39184H Brassica oleracea HOM05D000496 ORTHO05D000411 1.9e-16 89.0 50 72.0
BraA09t39002Z Brassica rapa HOM05D000496 ORTHO05D000411 1.9e-16 89.0 69 62.3
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-16 88.6 62 69.4
BcaC06g36471 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-16 88.6 70 58.6
BcaC09g48334 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-16 88.2 67 56.7
BolC1t05084H Brassica oleracea HOM05D000496 ORTHO05D000411 4.3e-16 87.8 78 56.4
BolSC21t60240H Brassica oleracea HOM05D000496 ORTHO05D000411 4.3e-16 87.8 64 60.9
BcaB04g17732 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-16 87.4 66 56.1
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-16 87.4 68 57.4
BcaC02g10789 Brassica carinata HOM05D000496 ORTHO05D000411 9.7e-16 86.7 67 58.2
BcaC06g36711 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-15 86.3 67 61.2
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-15 85.9 68 55.9
BcaNung02816 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-15 85.5 78 55.1
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-15 85.1 83 53.0
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-15 84.7 67 62.7
C06p14200 Brassica napus HOM05D000496 ORTHO05D000411 4.8e-15 84.3 78 55.1
BcaC01g00534 Brassica carinata HOM05D000020 ORTHO05D000543 6.3e-15 84.0 66 56.1
BcaC05g26989 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-15 84.0 66 56.1
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-14 82.0 84 47.6
BcaC09g49110 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-14 82.0 67 59.7
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-14 81.6 68 55.9
BcaB04g17691 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-14 81.6 63 57.1
BcaC03g15569 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-14 81.3 67 56.7
BcaB06g26352 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-14 80.9 68 55.9
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-14 80.5 65 60.0
BcaC02g08910 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-14 80.5 66 57.6
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-13 79.7 69 59.4
A05p19890 Brassica napus HOM05D000496 ORTHO05D000411 1.2e-13 79.7 65 58.5
BraA01t02446Z Brassica rapa HOM05D000496 ORTHO05D000411 1.2e-13 79.7 65 58.5
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-13 79.3 83 48.2
BcaC07g38016 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-13 79.3 65 56.9
BcaNung04301 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-13 79.3 75 52.0
BolC8t48398H Brassica oleracea HOM05D000496 ORTHO05D000411 1.5e-13 79.3 65 56.9
BcaC05g27417 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-13 79.0 66 57.6
BcaC05g28121 Brassica carinata HOM05D000496 ORTHO05D039070 2.0e-13 79.0 71 56.3
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-13 78.6 69 56.5
BcaC05g27815 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-13 78.2 66 57.6
BcaB01g03110 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-13 77.8 66 60.6
BcaC01g00867 Brassica carinata HOM05D010392 ORTHO05D040019 4.5e-13 77.8 64 54.7
BcaC04g23033 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-13 77.4 48 64.6
BcaB07g32484 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-12 75.5 59 57.6
BcaC06g35766 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-12 75.5 56 58.9
BcaC05g30568 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-12 75.1 65 53.8
BcaB01g02232 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-11 72.4 65 53.8
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-11 71.2 65 52.3
BcaC03g14957 Brassica carinata HOM05D000496 ORTHO05D000411 5.5e-11 70.9 50 66.0
BcaC07g39538 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-11 70.5 71 50.7
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-11 70.1 50 68.0
BcaB05g23273 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-10 69.7 67 52.2
BcaC03g14601 Brassica carinata HOM05D000496 ORTHO05D027466 1.2e-10 69.7 48 66.7
BolC2t08174H Brassica oleracea HOM05D000496 ORTHO05D027466 1.2e-10 69.7 48 66.7
BcaC04g20576 Brassica carinata HOM05D000496 ORTHO05D039987 2.1e-10 68.9 44 68.2
Thhalv10005260m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.4e-09 66.2 71 49.3
Thhalv10017779m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.3e-09 65.5 47 61.7
Sp7g09260 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.3e-09 65.5 56 53.6
BcaB04g17268 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-09 63.5 36 72.2
BcaNung03852 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-08 61.2 56 57.1
Thhalv10002297m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.7e-08 60.1 68 45.6
Thhalv10012321m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.7e-08 60.1 68 44.1
Thhalv10015762m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.7e-08 60.1 68 45.6
Thhalv10019512m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.7e-08 60.1 58 48.3
Sp1g16530 Schrenkiella parvula HOM05D000496 ORTHO05D000411 9.7e-08 60.1 48 50.0
Thhalv10011992m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.3e-07 59.7 58 46.6
Thhalv10015514m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.3e-07 59.7 68 44.1
BcaC06g36146 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-07 59.3 55 50.9
Thhalv10002827m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.7e-07 59.3 68 44.1
Carub.0003s2772 Capsella rubella HOM05D000496 ORTHO05D000411 2.2e-07 58.9 70 42.9
Thhalv10001142m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.7e-07 58.2 47 57.4
Thhalv10019737m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.7e-07 58.2 73 42.5
BcaC01g01817 Brassica carinata HOM05D000496 ORTHO05D000411 4.8e-07 57.8 63 50.8
Thhalv10011945m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.8e-07 57.8 73 42.5
Sp1g33990 Schrenkiella parvula HOM05D000496 ORTHO05D000411 6.3e-07 57.4 40 57.5
Sp1g32360 Schrenkiella parvula HOM05D000496 ORTHO05D000411 8.2e-07 57.0 35 62.9
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 1.1e-06 56.6 45 57.8
AL6G45480 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 1.4e-06 56.2 42 54.8
Thhalv10015686m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.4e-06 56.2 55 47.3
Sp6g04550 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.8e-06 55.8 66 40.9
Sp2g05200 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.4e-06 55.5 55 45.5
CARHR180340 Cardamine hirsuta HOM05D000496 ORTHO05D000411 3.1e-06 55.1 48 52.1
CARHR261370 Cardamine hirsuta HOM05D000496 ORTHO05D000411 3.1e-06 55.1 47 48.9
Sp4g08700 Schrenkiella parvula HOM05D000496 ORTHO05D000411 6.9e-06 53.9 47 55.3
Sp6g04730 Schrenkiella parvula HOM05D000496 ORTHO05D000411 6.9e-06 53.9 54 42.6
Sp7g08130 Schrenkiella parvula HOM05D000496 ORTHO05D000411 6.9e-06 53.9 34 61.8
Carub.0001s1088 Capsella rubella HOM05D000496 ORTHO05D000411 9.1e-06 53.5 46 43.5


User provided reference genes

Program Settings