Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g17044 Brassica carinata HOM05D005341 ORTHO05D006712 2.2e-165 585.5 283 100.0
C02p49590 Brassica napus HOM05D005341 ORTHO05D006712 2.2e-165 585.5 283 100.0
BolC2t11038H Brassica oleracea HOM05D005341 ORTHO05D006712 2.4e-164 582.0 283 98.9
A02p32060 Brassica napus HOM05D005341 ORTHO05D006712 1.6e-163 579.3 283 98.2
BraA02t08217Z Brassica rapa HOM05D005341 ORTHO05D006712 1.6e-163 579.3 283 98.2
BcaB07g30394 Brassica carinata HOM05D005341 ORTHO05D006712 1.5e-158 562.8 283 96.1
Sp2g12940 Schrenkiella parvula HOM05D005341 ORTHO05D006712 9.6e-153 543.5 283 91.5
Thhalv10000985m.g Eutrema salsugineum HOM05D005341 ORTHO05D006712 2.1e-152 542.3 283 91.2
CARHR144010 Cardamine hirsuta HOM05D005341 ORTHO05D006712 5.3e-151 537.7 281 92.5
Carub.0005s0045 Capsella rubella HOM05D005341 ORTHO05D006712 9.9e-150 533.5 280 91.4
AL5G10480 Arabidopsis lyrata HOM05D005341 ORTHO05D006712 8.4e-149 530.4 281 91.1
AT2G01490 Arabidopsis thaliana HOM05D005341 ORTHO05D006712 3.2e-148 528.5 280 90.4
Aa31LG2G8430 Aethionema arabicum HOM05D005341 ORTHO05D006712 1.5e-145 519.6 291 85.9
THA.LOC104823806 Tarenaya hassleriana HOM05D005341 ORTHO05D006712 4.6e-139 498.0 280 83.6
RcHm_v2.0_Chr4g0441521 Rosa chinensis HOM05D005341 ORTHO05D006712 4.2e-132 474.9 281 77.9
Prupe.1G326800 Prunus persica HOM05D005341 ORTHO05D006712 9.3e-132 473.8 281 78.6
MD16G1026600 Malus domestica HOM05D005341 ORTHO05D006712 1.0e-130 470.3 281 76.9
Nn4g24210 Nelumbo nucifera HOM05D005341 ORTHO05D006712 8.7e-130 467.2 280 77.5
FAN07G0561 Fragaria x ananassa HOM05D005341 ORTHO05D006712 2.5e-129 465.7 281 76.2
Cpa.g.sc65.157 Carica papaya HOM05D005341 ORTHO05D006712 5.7e-129 464.5 280 76.4
Ciclev10016178m.g Citrus clementina HOM05D005341 ORTHO05D006712 9.7e-129 463.8 281 75.4
QL01p001313 Quercus lobata HOM05D005341 ORTHO05D006712 1.3e-128 463.4 280 75.4
FvH4_4g32640 Fragaria vesca HOM05D005341 ORTHO05D006712 1.7e-128 463.0 281 75.8
FAN12G2540 Fragaria x ananassa HOM05D005341 ORTHO05D006712 1.7e-128 463.0 281 75.8
FAN22G2374 Fragaria x ananassa HOM05D005341 ORTHO05D006712 1.7e-128 463.0 281 75.8
arahy.Tifrunner.gnm1.ann1.LQU7YY Arachis hypogaea HOM05D005341 ORTHO05D006712 6.3e-128 461.1 281 75.4
Peaxi162Scf00159g01021 Petunia axillaris HOM05D005341 ORTHO05D006712 4.1e-127 458.4 282 74.8
Atru.chr11.477 Acer truncatum HOM05D005341 ORTHO05D006712 5.3e-127 458.0 282 74.8
PGR044G1964 Punica granatum HOM05D005341 ORTHO05D006712 6.9e-127 457.6 281 74.7
TPR.G38361 Trifolium pratense HOM05D005341 ORTHO05D006712 9.1e-127 457.2 277 76.2
C09p30150 Brassica napus HOM05D005341 ORTHO05D006712 1.5e-126 456.4 262 84.7
CiPaw.05G196000 Carya illinoinensis HOM05D005341 ORTHO05D006712 1.5e-126 456.4 280 73.9
Potri.006G222800 Populus trichocarpa HOM05D005341 ORTHO05D006712 2.0e-126 456.1 281 74.0
Thecc.02G283300 Theobroma cacao HOM05D005341 ORTHO05D006712 2.0e-126 456.1 282 77.0
MD13G1023900 Malus domestica HOM05D005341 ORTHO05D006712 3.4e-126 455.3 281 75.8
BolC9t55880H Brassica oleracea HOM05D005341 ORTHO05D006712 4.5e-126 454.9 262 84.0
Dinv14419 Davidia involucrata HOM05D005341 ORTHO05D006712 5.9e-126 454.5 282 74.1
Manes.15G129000 Manihot esculenta HOM05D005341 ORTHO05D006712 7.7e-126 454.1 281 76.5
TWI31G1197 Tripterygium wilfordii HOM05D005341 ORTHO05D006712 7.7e-126 454.1 280 75.7
Eucgr.B00057 Eucalyptus grandis HOM05D005341 ORTHO05D006712 1.3e-125 453.4 280 73.2
Duzib268G0076 Durio zibethinus HOM05D005341 ORTHO05D006712 1.7e-125 453.0 282 76.2
Lj4g0007741 Lotus japonicus HOM05D005341 ORTHO05D006712 5.0e-125 451.4 277 75.1
HanXRQChr17g0567271 Helianthus annuus HOM05D005341 ORTHO05D006712 8.5e-125 450.7 281 75.1
Ah.02g127780 Amaranthus hybridus HOM05D005341 ORTHO05D006712 1.4e-124 449.9 280 73.9
Lalb_Chr16g0385061 Lupinus albus HOM05D005341 ORTHO05D006712 1.4e-124 449.9 281 73.0
COL.COLO4_13155 Corchorus olitorius HOM05D005341 ORTHO05D006712 2.5e-124 449.1 282 75.9
Glyma.07G219300 Glycine max HOM05D005341 ORTHO05D006712 2.5e-124 449.1 277 74.7
Lsat_1_v5_gn_4_13500 Lactuca sativa HOM05D005341 ORTHO05D006712 2.5e-124 449.1 281 73.7
CSS0010642 Camellia sinensis var. sinensis HOM05D005341 ORTHO05D006712 3.2e-124 448.7 281 73.0
Sed0016642 Sechium edule HOM05D005341 ORTHO05D006712 3.2e-124 448.7 282 73.4
Actinidia36662 Actinidia chinensis HOM05D005341 ORTHO05D006712 4.2e-124 448.4 281 72.6
Glyma.20G017500 Glycine max HOM05D005341 ORTHO05D006712 5.5e-124 448.0 277 74.7
Hund24969 Selenicereus undatus HOM05D005341 ORTHO05D006712 5.5e-124 448.0 280 73.6
GSVIVG01011739001 Vitis vinifera HOM05D005341 ORTHO05D006712 5.5e-124 448.0 281 73.3
MSTRG.2162 Avicennia marina HOM05D005341 ORTHO05D006712 1.6e-123 446.4 282 74.8
PSO478G3305 Papaver somniferum HOM05D005341 ORTHO05D006712 2.1e-123 446.0 280 74.3
Psat7g129280 Pisum sativum HOM05D005341 ORTHO05D006712 1.0e-122 443.7 277 73.3
Gohir.D01G144400 Gossypium hirsutum HOM05D005341 ORTHO05D006712 1.8e-122 443.0 282 74.1
Cc11_g08490 Coffea canephora HOM05D005341 ORTHO05D006712 2.3e-122 442.6 281 73.3
DCAR_007306 Daucus carota HOM05D005341 ORTHO05D006712 2.3e-122 442.6 281 72.2
Lj6A744T53 Lonicera japonica HOM05D005341 ORTHO05D006712 3.0e-122 442.2 286 72.4
CsaV3_5G013260 Cucumis sativus L. HOM05D005341 ORTHO05D006712 3.9e-122 441.8 280 72.5
CAN.G1298.33 Capsicum annuum HOM05D005341 ORTHO05D006712 5.1e-122 441.4 282 72.3
Gorai.002G178300 Gossypium raimondii HOM05D005341 ORTHO05D006712 5.1e-122 441.4 282 73.8
unitig_27.g25178 Utricularia gibba HOM05D005341 ORTHO05D006712 5.1e-122 441.4 282 72.7
ClCG11G001200 Citrullus lanatus HOM05D005341 ORTHO05D006712 1.1e-121 440.3 283 72.1
VMungo0251G3738 Vigna mungo HOM05D005341 ORTHO05D006712 2.0e-121 439.5 275 73.5
TAR622G0920 Trochodendron aralioides HOM05D005341 ORTHO05D006712 5.7e-121 438.0 275 73.5
CDE05G0416 Ceratophyllum demersum HOM05D005341 ORTHO05D006712 9.7e-121 437.2 280 70.7
PSO017G2475 Papaver somniferum HOM05D005341 ORTHO05D006712 9.7e-121 437.2 280 73.6
Sopen05g003820 Solanum pennellii HOM05D005341 ORTHO05D006712 9.7e-121 437.2 280 71.8
Solyc05g007970.4 Solanum lycopersicum HOM05D005341 ORTHO05D006712 1.3e-120 436.8 280 71.4
PGSC0003DMG400018423 Solanum tuberosum HOM05D005341 ORTHO05D006712 3.7e-120 435.3 280 71.1
MELO3C026795.2 Cucumis melo HOM05D005341 ORTHO05D006712 4.8e-120 434.9 280 71.8
Duzib251G0346 Durio zibethinus HOM05D005341 ORTHO05D006712 8.2e-120 434.1 282 74.1
Gohir.A01G151200 Gossypium hirsutum HOM05D005341 ORTHO05D006712 1.1e-119 433.7 282 72.7
Medtr4g084560 Medicago truncatula HOM05D005341 ORTHO05D006712 1.1e-119 433.7 285 72.6
ATR0564G155 Amborella trichopoda HOM05D005341 ORTHO05D006712 2.4e-119 432.6 280 70.7
Sc04g0005370 Simmondsia chinensis HOM05D005341 ORTHO05D006712 4.1e-119 431.8 280 70.7
AUR62039516 Chenopodium quinoa HOM05D005341 ORTHO05D006712 4.5e-118 428.3 270 74.8
Nitab4.5_0000688g0150 Nicotiana tabacum HOM05D005341 ORTHO05D006712 8.5e-117 424.1 274 72.6
HPP92_005883 Vanilla planifolia HOM05D005341 ORTHO05D006712 1.1e-116 423.7 281 71.9
Aqoxy3G00085 Aquilegia oxysepala HOM05D005341 ORTHO05D006712 1.9e-116 422.9 307 64.8
EL10Ac3g06547 Beta vulgaris HOM05D005341 ORTHO05D006712 4.2e-116 421.8 268 73.5
Ca_18745_v3 Cicer arietinum L. HOM05D005341 ORTHO05D006712 2.1e-115 419.5 275 72.7
Oeu062657.1 Olea europaea HOM05D005341 ORTHO05D006712 2.1e-115 419.5 270 72.6
SEGI_27003 Sequoiadendron giganteum HOM05D005341 ORTHO05D006712 8.0e-115 417.5 278 68.0
BcaC04g21581 Brassica carinata HOM05D005341 ORTHO05D006712 5.2e-114 414.8 248 81.9
Sabra06G0172200 Salix brachista HOM05D005341 ORTHO05D006712 2.0e-113 412.9 311 64.0
SHI36659 Sapria himalayana HOM05D005341 ORTHO05D006712 2.6e-113 412.5 269 71.0
Migut.E00437 Erythranthe guttata HOM05D005341 ORTHO05D006712 3.3e-113 412.1 282 69.9
ECA234G4311 Erigeron canadensis HOM05D005341 ORTHO05D006712 5.7e-113 411.4 281 70.5
Phvul.002G095700 Phaseolus vulgaris HOM05D005341 ORTHO05D006712 5.7e-113 411.4 247 75.7
SalBow8G3124 Salvia bowleyana HOM05D005341 ORTHO05D006712 1.1e-111 407.1 282 68.4
SalBow8G3488 Salvia bowleyana HOM05D005341 ORTHO05D006712 1.1e-111 407.1 282 68.4
Os03g0708100 Oryza sativa ssp. japonica HOM05D005341 ORTHO05D006712 2.6e-110 402.5 277 66.8
AUR62014184 Chenopodium quinoa HOM05D005341 ORTHO05D006712 7.7e-110 401.0 250 74.8
Ca_29576_v3 Cicer arietinum L. HOM05D005341 ORTHO05D006712 1.7e-109 399.8 263 73.0
Os05g0473900 Oryza sativa ssp. japonica HOM05D005341 ORTHO05D006712 2.2e-109 399.4 277 66.1
Rhsim09G0096600 Rhododendron simsii HOM05D005341 ORTHO05D006712 3.6e-107 392.1 295 62.7
CANSAT25G0384 Cannabis sativa HOM05D005341 ORTHO05D006712 4.7e-107 391.7 240 77.5
SMO358G0398 Selaginella moellendorffii HOM05D005341 ORTHO05D006712 1.2e-105 387.1 261 66.7
Zm00001eb054520 Zea mays HOM05D005341 ORTHO05D006712 5.9e-102 374.8 262 66.0
SGA_v2.0_scaffold39G15193 Striga asiatica HOM05D005341 ORTHO05D006712 2.9e-101 372.5 236 74.2
Mapoly0012s0126 Marchantia polymorpha HOM05D005341 ORTHO05D006712 1.1e-95 354.0 279 60.2
Pp3c7_14500 Physcomitrium patens HOM05D005341 ORTHO05D006712 7.7e-94 347.8 282 58.5
MBI12_g12675_MAGBIO Magnolia biondii HOM05D005341 ORTHO05D006712 2.3e-90 336.3 190 77.9
Cre16.g673281 Chlamydomonas reinhardtii HOM05D005341 ORTHO05D006712 3.4e-89 332.4 280 57.5
vmacro10652 Vaccinium macrocarpon HOM05D005341 ORTHO05D006712 5.7e-89 331.6 420 44.5
Zm00001eb216580 Zea mays HOM05D005341 ORTHO05D006712 6.6e-85 318.2 265 58.5
vmacro10649 Vaccinium macrocarpon HOM05D005341 ORTHO05D006712 2.1e-83 313.2 420 43.3
CBR_g31524 Chara braunii HOM05D005341 ORTHO05D006712 3.7e-80 302.4 264 56.8
Zm00001eb409650 Zea mays HOM05D005341 ORTHO05D006712 1.2e-75 287.3 167 73.7
Zm00001eb142690 Zea mays HOM05D005341 ORTHO05D006712 8.0e-75 284.6 167 73.1
AagrBONN_evm.TU.Sc2ySwM_228.566 Anthoceros agrestis HOM05D005341 ORTHO05D006712 6.8e-74 281.6 176 68.8
Zm00001eb341930 Zea mays HOM05D005341 ORTHO05D006712 8.9e-74 281.2 176 69.3
MCO03G480 Micromonas commoda HOM05D005341 ORTHO05D006712 2.0e-73 280.0 280 47.5
A09p23410 Brassica napus HOM05D005341 ORTHO05D006712 9.8e-73 277.7 249 61.8
Oeu018602.1 Olea europaea HOM05D005341 ORTHO05D006712 3.5e-70 269.2 143 81.8
unitig_29.g31871 Utricularia gibba HOM05D005341 ORTHO05D006712 3.5e-70 269.2 307 46.6
PRCOL_00000921 Prasinoderma coloniale HOM05D005341 ORTHO05D006712 9.5e-68 261.2 296 45.9
BraA09t37941Z Brassica rapa HOM05D005341 ORTHO05D006712 6.8e-66 255.0 248 59.3
Zm00001eb184170 Zea mays HOM05D005341 ORTHO05D006712 7.8e-62 241.5 159 68.6
Cfa022618 Carpinus fangiana HOM05D005341 ORTHO05D006712 8.1e-59 231.5 295 42.4
AagrBONN_evm.TU.Sc2ySwM_117.3795 Anthoceros agrestis HOM05D005341 ORTHO05D006712 4.6e-54 215.7 146 63.0
FAN17G2406 Fragaria x ananassa HOM05D005341 ORTHO05D006712 6.6e-53 211.8 135 74.1
Haze_10984 Corylus avellana HOM05D005341 ORTHO05D006712 5.6e-52 208.8 142 69.0
Haze_10982 Corylus avellana HOM05D005341 ORTHO05D006712 5.6e-44 182.2 98 81.6
Haze_27483 Corylus avellana HOM05D005341 ORTHO05D006712 1.7e-40 170.6 227 39.6
BcaB07g30743 Brassica carinata HOM05D005341 ORTHO05D006712 2.2e-40 170.2 113 71.7
CAN.G651.12 Capsicum annuum HOM05D005428 ORTHO05D006876 4.6e-30 136.0 77 75.3
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 5.6e-28 129.0 70 78.6
Zm00001eb025440 Zea mays HOM05D005341 ORTHO05D006712 3.7e-27 126.3 72 70.8
Zm00001eb049700 Zea mays HOM05D005341 ORTHO05D006712 3.7e-27 126.3 72 70.8
FAN18G3043 Fragaria x ananassa HOM05D005341 ORTHO05D006712 2.2e-24 117.1 75 73.3
FAN24G2017 Fragaria x ananassa HOM05D005341 ORTHO05D006712 2.9e-24 116.7 76 72.4
FAN01G1793 Fragaria x ananassa HOM05D000061 ORTHO05D003487 4.9e-24 115.9 92 62.0
FvH4_3g28840 Fragaria vesca HOM05D005341 ORTHO05D006712 1.1e-23 114.8 80 66.2
MBI12_g12674_MAGBIO Magnolia biondii HOM05D005341 ORTHO05D006712 4.1e-18 96.3 80 60.0
Actinidia14980 Actinidia chinensis HOM05D005341 ORTHO05D006712 1.0e-13 81.6 52 71.2
CDE11G1102 Ceratophyllum demersum HOM05D005341 ORTHO05D006712 1.5e-12 77.8 85 49.4
GSVIVG01029848001 Vitis vinifera HOM05D000172 ORTHO05D000273 2.2e-11 73.9 55 69.1
FAN21G0384 Fragaria x ananassa HOM05D005341 ORTHO05D006712 9.1e-10 68.6 88 48.9
CBR_g37149 Chara braunii HOM05D005341 ORTHO05D017343 1.5e-09 67.8 169 29.0
unitig_699.g19475 Utricularia gibba HOM05D005341 ORTHO05D416497 2.1e-06 57.4 50 60.0


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