Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g16953 Brassica carinata HOM05D008604 ORTHO05D027525 3.2e-53 211.5 106 100.0
C02p48590 Brassica napus HOM05D008604 ORTHO05D027525 3.2e-53 211.5 106 100.0
BolC2t10893H Brassica oleracea HOM05D008604 ORTHO05D027525 2.8e-49 198.4 106 94.3
BolC2t10905H Brassica oleracea HOM05D008604 ORTHO05D027525 2.8e-49 198.4 106 94.3
BolC2t10902H Brassica oleracea HOM05D008604 ORTHO05D104474 2.9e-46 188.3 101 92.1
A02p31020 Brassica napus HOM05D008604 ORTHO05D103593 1.4e-40 169.5 93 93.5
BolC2t10952H Brassica oleracea HOM05D008604 ORTHO05D019861 3.7e-33 144.8 78 94.9
A02p31250 Brassica napus HOM05D008604 ORTHO05D019861 8.6e-30 133.7 77 88.3
BcaC03g16955 Brassica carinata HOM05D008604 ORTHO05D019861 4.3e-29 131.3 103 68.9
C02p48610 Brassica napus HOM05D008604 ORTHO05D019861 4.3e-29 131.3 103 68.9
BolC2t10908H Brassica oleracea HOM05D008604 ORTHO05D019861 8.0e-28 127.1 77 83.1
BraA02t08128Z Brassica rapa HOM05D008604 ORTHO05D019861 1.3e-25 119.8 71 84.5
BolC2t10949H Brassica oleracea HOM05D008604 ORTHO05D024521 1.5e-18 96.3 66 71.2
BraA02t08120Z Brassica rapa HOM05D008604 ORTHO05D024521 4.4e-18 94.7 78 65.4
BraA02t08127Z Brassica rapa HOM05D008604 ORTHO05D024521 4.4e-18 94.7 78 65.4
C02p47950 Brassica napus HOM05D008604 ORTHO05D018753 3.2e-16 88.6 77 62.3
BolC2t10826H Brassica oleracea HOM05D008604 ORTHO05D018753 3.2e-16 88.6 77 62.3
A02p30410 Brassica napus HOM05D008604 ORTHO05D018753 7.1e-16 87.4 77 61.0
A02p31140 Brassica napus HOM05D008604 ORTHO05D018787 7.1e-16 87.4 76 60.5
BraA02t08059Z Brassica rapa HOM05D008604 ORTHO05D018753 7.1e-16 87.4 77 61.0
BraA02t08119Z Brassica rapa HOM05D008604 ORTHO05D018787 9.2e-16 87.0 91 54.9
BraA02t08126Z Brassica rapa HOM05D008604 ORTHO05D018787 9.2e-16 87.0 76 60.5
A02p30430 Brassica napus HOM05D008604 ORTHO05D018753 1.3e-14 83.2 77 62.3
A02p31240 Brassica napus HOM05D008604 ORTHO05D024521 1.1e-13 80.1 71 63.4
BolC2t10931H Brassica oleracea HOM05D008604 ORTHO05D018787 4.3e-13 78.2 69 60.9
A02p31160 Brassica napus HOM05D008604 ORTHO05D024521 6.2e-12 74.3 60 66.7
A02p30460 Brassica napus HOM05D008604 ORTHO05D018753 8.1e-12 73.9 66 62.1
BraA02t08116Z Brassica rapa HOM05D008604 ORTHO05D018787 1.1e-11 73.6 59 67.8
BraA02t08123Z Brassica rapa HOM05D008604 ORTHO05D018787 1.1e-11 73.6 59 67.8
A06p45140 Brassica napus HOM05D001766 ORTHO05D001875 4.0e-11 71.6 74 52.7
C07p31000 Brassica napus HOM05D001766 ORTHO05D001875 4.0e-11 71.6 74 50.0
BraA06t27384Z Brassica rapa HOM05D001766 ORTHO05D001875 2.0e-10 69.3 74 51.4
BraA02t08117Z Brassica rapa HOM05D008604 ORTHO05D033176 5.8e-10 67.8 70 54.3
A02p31110 Brassica napus HOM05D008604 ORTHO05D033176 4.9e-09 64.7 105 40.0
BolC2t10928H Brassica oleracea HOM05D008604 ORTHO05D042987 4.1e-08 61.6 76 47.4
BolC2t10919H Brassica oleracea HOM05D008604 ORTHO05D106138 9.2e-08 60.5 68 50.0
BraA02t08124Z Brassica rapa HOM05D008604 ORTHO05D042987 2.7e-07 58.9 76 47.4
BcaC06g31396 Brassica carinata HOM05D008604 ORTHO05D039716 6.0e-07 57.8 45 57.8
BolC2t10920H Brassica oleracea HOM05D008604 ORTHO05D018787 3.9e-06 55.1 42 71.4


User provided reference genes

Program Settings