Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g16816 Brassica carinata HOM05D008872 ORTHO05D011322 3.8e-224 781.2 395 100.0
BolC3t19826H Brassica oleracea HOM05D008872 ORTHO05D032322 2.6e-180 635.6 438 79.9
C02p46890 Brassica napus HOM05D008872 ORTHO05D032322 6.4e-179 630.9 438 79.7
BcaC08g45935 Brassica carinata HOM05D008872 ORTHO05D039599 2.9e-147 525.8 307 88.3
C06p37330 Brassica napus HOM05D008872 ORTHO05D039599 2.9e-147 525.8 307 88.3
BcaC01g00092 Brassica carinata HOM05D008872 ORTHO05D032322 2.1e-145 519.6 394 74.9
C07p42690 Brassica napus HOM05D008872 ORTHO05D011322 1.7e-131 473.4 396 68.7
C05p17110 Brassica napus HOM05D008872 ORTHO05D011322 3.8e-99 365.9 303 71.0
BcaC04g22210 Brassica carinata HOM05D008872 ORTHO05D011322 2.5e-82 310.1 438 49.1
BcaC08g44779 Brassica carinata HOM05D008872 ORTHO05D032631 9.5e-74 281.6 410 47.6
BcaNung02292 Brassica carinata HOM05D000025 ORTHO05D000040 7.5e-71 271.9 242 69.0
BolC7t44799H Brassica oleracea HOM05D008872 ORTHO05D011322 7.5e-71 271.9 139 93.5
BolC3t20471H Brassica oleracea HOM05D008872 ORTHO05D011322 1.4e-69 267.7 139 92.8
C06p02220 Brassica napus HOM05D008872 ORTHO05D011322 2.3e-64 250.4 217 71.0
C06p23490 Brassica napus HOM05D008872 ORTHO05D032631 1.5e-63 247.7 307 51.5
BolC2t10737H Brassica oleracea HOM05D008872 ORTHO05D105753 2.9e-46 190.3 90 100.0
BcaC02g07321 Brassica carinata HOM05D008872 ORTHO05D011322 3.2e-45 186.8 446 38.8
BolC6t37523H Brassica oleracea HOM05D008872 ORTHO05D032631 2.3e-43 180.6 289 46.4
C09p62250 Brassica napus HOM05D008872 ORTHO05D011322 4.8e-41 172.9 165 65.5
C09p54500 Brassica napus HOM05D008872 ORTHO05D097415 4.8e-33 146.4 132 56.8
BcaB04g20432 Brassica carinata HOM05D008872 ORTHO05D011322 9.6e-26 122.1 345 35.4
A05p10860 Brassica napus HOM05D021045 ORTHO05D027803 2.2e-22 110.9 354 33.3
BraA05t20031Z Brassica rapa HOM05D021045 ORTHO05D027803 4.9e-22 109.8 354 33.3
A07p34770 Brassica napus HOM05D008872 ORTHO05D011322 9.3e-21 105.5 377 31.6
BcaC01g05406 Brassica carinata HOM05D008872 ORTHO05D011322 1.0e-19 102.1 145 49.0
BcaC06g34166 Brassica carinata HOM05D008872 ORTHO05D039385 7.4e-18 95.9 162 47.5
C08p22310 Brassica napus HOM05D009579 ORTHO05D019922 9.7e-18 95.5 208 37.5
C05p17100 Brassica napus HOM05D008872 ORTHO05D103501 1.8e-16 91.3 48 93.8
C05p01530 Brassica napus HOM05D008872 ORTHO05D011322 6.9e-16 89.4 76 67.1
A04p33690 Brassica napus HOM05D015039 ORTHO05D011322 8.5e-14 82.4 156 39.7
C08p52410 Brassica napus HOM05D008872 ORTHO05D011322 1.9e-13 81.3 151 44.4
BolC7t43612H Brassica oleracea HOM05D008872 ORTHO05D011322 3.2e-13 80.5 151 43.7
C06p48220 Brassica napus HOM05D063514 ORTHO05D103609 4.2e-13 80.1 220 32.7
C09p48550 Brassica napus HOM05D009579 ORTHO05D019922 5.5e-13 79.7 196 36.7
BNapus_Darmor_BZH_scaffold_38p02020 Brassica napus HOM05D008872 ORTHO05D011322 7.2e-13 79.3 146 40.4
BolC2t06990H Brassica oleracea HOM05D008872 ORTHO05D011322 7.2e-13 79.3 146 40.4
C03p17890 Brassica napus HOM05D008872 ORTHO05D011322 9.4e-13 79.0 90 53.3
BolC5t28809H Brassica oleracea HOM05D015039 ORTHO05D011322 6.1e-12 76.3 156 39.1
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 7.9e-12 75.9 186 34.9
C03p83110 Brassica napus HOM05D015039 ORTHO05D011322 1.8e-11 74.7 150 41.3
C03p18040 Brassica napus HOM05D008872 ORTHO05D011322 3.0e-11 73.9 60 68.3
A04p33340 Brassica napus HOM05D000073 ORTHO05D000033 1.1e-10 72.0 191 33.5
C04p02470 Brassica napus HOM05D008872 ORTHO05D011322 3.3e-10 70.5 56 64.3
C02p56950 Brassica napus HOM05D008872 ORTHO05D011322 4.3e-10 70.1 56 66.1
BNapus_Darmor_BZH_scaffold_229p00090 Brassica napus HOM05D008872 ORTHO05D011322 1.4e-08 65.1 343 28.9
C06p03870 Brassica napus HOM05D015039 ORTHO05D000276 6.9e-08 62.8 144 38.9
C07p53080 Brassica napus HOM05D013189 ORTHO05D032411 2.6e-07 60.8 173 32.9
BcaNung03192 Brassica carinata HOM05D013189 ORTHO05D032411 7.7e-07 59.3 306 26.5
BcaC08g43114 Brassica carinata HOM05D015039 ORTHO05D011322 1.0e-06 58.9 142 37.3
C09p54490 Brassica napus HOM05D008872 ORTHO05D011322 2.2e-06 57.8 148 41.9
BcaC05g30090 Brassica carinata HOM05D015039 ORTHO05D011322 5.0e-06 56.6 139 37.4


User provided reference genes

Program Settings