Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g16772 Brassica carinata HOM05D000213 ORTHO05D032906 6.8e-53 210.3 100 100.0
BolC2t10700H Brassica oleracea HOM05D012494 ORTHO05D032906 2.7e-33 145.2 82 89.0
BcaB06g28939 Brassica carinata HOM05D000213 ORTHO05D032906 6.0e-25 117.5 89 68.5
BraA01t01496Z Brassica rapa HOM05D000213 ORTHO05D000985 2.1e-22 109.0 103 57.3
BolC7t45841H Brassica oleracea HOM05D000213 ORTHO05D000985 2.8e-22 108.6 100 59.0
BcaC06g32897 Brassica carinata HOM05D000213 ORTHO05D000985 3.6e-22 108.2 100 59.0
A03p55140 Brassica napus HOM05D000213 ORTHO05D000985 3.6e-22 108.2 100 59.0
BraA03t14574Z Brassica rapa HOM05D000213 ORTHO05D000985 3.6e-22 108.2 100 59.0
BcaNung01130 Brassica carinata HOM05D000213 ORTHO05D000985 8.1e-22 107.1 100 59.0
Sp7g22220 Schrenkiella parvula HOM05D000213 ORTHO05D000985 1.1e-21 106.7 100 59.0
A01p15570 Brassica napus HOM05D000213 ORTHO05D000985 1.8e-21 105.9 100 58.0
C07p53480 Brassica napus HOM05D000213 ORTHO05D000985 2.4e-21 105.5 100 58.0
BolC1t01879H Brassica oleracea HOM05D000213 ORTHO05D000985 9.0e-21 103.6 100 57.0
BcaC09g50892 Brassica carinata HOM05D000213 ORTHO05D000985 4.5e-20 101.3 100 56.0
C01p19520 Brassica napus HOM05D000213 ORTHO05D000985 4.5e-20 101.3 100 56.0
Thhalv10025630m.g Eutrema salsugineum HOM05D000213 ORTHO05D000985 1.3e-19 99.8 101 57.4
CARHR231660 Cardamine hirsuta HOM05D000213 ORTHO05D000985 8.4e-19 97.1 100 56.0
AL7G29030 Arabidopsis lyrata HOM05D000213 ORTHO05D000985 1.1e-18 96.7 100 55.0
AT4G24240 Arabidopsis thaliana HOM05D000213 ORTHO05D000985 3.2e-18 95.1 100 54.0
Carub.0007s1682 Capsella rubella HOM05D000213 ORTHO05D000985 1.9e-15 85.9 99 51.5
Nitab4.5_0001603g0110 Nicotiana tabacum HOM05D000213 ORTHO05D000985 8.4e-11 70.5 91 47.3
Nitab4.5_0000929g0030 Nicotiana tabacum HOM05D000213 ORTHO05D000985 3.2e-10 68.6 103 43.7
CiPaw.15G052500 Carya illinoinensis HOM05D000213 ORTHO05D000985 5.5e-10 67.8 88 50.0
Peaxi162Scf00549g00222 Petunia axillaris HOM05D000213 ORTHO05D000985 5.5e-10 67.8 102 42.2
Sed0023573 Sechium edule HOM05D000213 ORTHO05D000985 1.6e-09 66.2 100 44.0
CAN.G370.27 Capsicum annuum HOM05D000213 ORTHO05D000985 2.7e-09 65.5 106 42.5
CsaV3_4G034570 Cucumis sativus L. HOM05D000213 ORTHO05D000985 2.7e-09 65.5 98 45.9
FvH4_1g16480 Fragaria vesca HOM05D000213 ORTHO05D000985 2.7e-09 65.5 100 44.0
FAN25G0194 Fragaria x ananassa HOM05D000213 ORTHO05D000985 2.7e-09 65.5 100 44.0
Solyc02g093050.3 Solanum lycopersicum HOM05D000213 ORTHO05D000985 2.7e-09 65.5 106 42.5
PGSC0003DMG400024961 Solanum tuberosum HOM05D000213 ORTHO05D000985 2.7e-09 65.5 106 42.5
THA.LOC104825748 Tarenaya hassleriana HOM05D000213 ORTHO05D000985 2.7e-09 65.5 96 45.8
RcHm_v2.0_Chr2g0106361 Rosa chinensis HOM05D000213 ORTHO05D000985 4.6e-09 64.7 103 42.7
Ah.08g220580 Amaranthus hybridus HOM05D000213 ORTHO05D000985 6.0e-09 64.3 83 54.2
Cfa009961 Carpinus fangiana HOM05D000213 ORTHO05D000985 6.0e-09 64.3 98 46.9
ClCG05G020160 Citrullus lanatus HOM05D000213 ORTHO05D000985 6.0e-09 64.3 97 45.4
FAN19G1846 Fragaria x ananassa HOM05D000213 ORTHO05D000985 6.0e-09 64.3 97 44.3
FAN24G1396 Fragaria x ananassa HOM05D000213 ORTHO05D000985 6.0e-09 64.3 97 44.3
FAN26G1331 Fragaria x ananassa HOM05D000213 ORTHO05D000985 6.0e-09 64.3 97 44.3
FAN28G0251 Fragaria x ananassa HOM05D000213 ORTHO05D000985 6.0e-09 64.3 97 44.3
FAN28G1055 Fragaria x ananassa HOM05D000213 ORTHO05D000985 6.0e-09 64.3 97 44.3
Sc15g0005900 Simmondsia chinensis HOM05D000213 ORTHO05D000985 6.0e-09 64.3 96 49.0
Sopen02g037620 Solanum pennellii HOM05D000213 ORTHO05D000985 6.0e-09 64.3 106 42.5
Cpa.g.sc55.104 Carica papaya HOM05D000213 ORTHO05D000985 7.9e-09 63.9 100 43.0
Gohir.A11G196100 Gossypium hirsutum HOM05D000213 ORTHO05D000985 7.9e-09 63.9 97 44.3
HanXRQChr04g0103501 Helianthus annuus HOM05D000213 ORTHO05D000985 7.9e-09 63.9 99 48.5
Medtr5g016610 Medicago truncatula HOM05D000213 ORTHO05D000985 7.9e-09 63.9 89 44.9
EL10As7g23779 Beta vulgaris HOM05D000213 ORTHO05D000985 1.0e-08 63.5 96 46.9
Prupe.1G431100 Prunus persica HOM05D000213 ORTHO05D000985 1.0e-08 63.5 100 45.0
CANSAT25G0302 Cannabis sativa HOM05D000213 ORTHO05D000985 1.3e-08 63.2 97 44.3
ECA247G2166 Erigeron canadensis HOM05D000033 ORTHO05D003265 1.3e-08 63.2 97 47.4
Gohir.D11G202100 Gossypium hirsutum HOM05D000213 ORTHO05D000985 1.3e-08 63.2 113 43.4
AUR62038804 Chenopodium quinoa HOM05D000213 ORTHO05D000985 1.8e-08 62.8 95 47.4
AUR62043687 Chenopodium quinoa HOM05D000213 ORTHO05D000985 1.8e-08 62.8 95 47.4
Haze_15363 Corylus avellana HOM05D000213 ORTHO05D000985 1.8e-08 62.8 111 44.1
Gorai.007G216700 Gossypium raimondii HOM05D000213 ORTHO05D000985 1.8e-08 62.8 113 43.4
MELO3C007576.2 Cucumis melo HOM05D000213 ORTHO05D000985 2.3e-08 62.4 104 41.3
FAN07G2938 Fragaria x ananassa HOM05D000213 ORTHO05D000985 2.3e-08 62.4 97 43.3
FAN15G2819 Fragaria x ananassa HOM05D000213 ORTHO05D000985 2.3e-08 62.4 103 40.8
Glyma.11G053100 Glycine max HOM05D000213 ORTHO05D000985 2.3e-08 62.4 101 43.6
HanXRQChr16g0508961 Helianthus annuus HOM05D000213 ORTHO05D000985 2.3e-08 62.4 99 44.4
MD02G1177500 Malus domestica HOM05D000213 ORTHO05D000985 2.3e-08 62.4 102 43.1
MD15G1287300 Malus domestica HOM05D000213 ORTHO05D000985 2.3e-08 62.4 103 42.7
Cfa004048 Carpinus fangiana HOM05D000213 ORTHO05D000985 3.0e-08 62.0 110 43.6
ClCG01G016980 Citrullus lanatus HOM05D000213 ORTHO05D000985 3.0e-08 62.0 98 43.9
Haze_18062 Corylus avellana HOM05D000213 ORTHO05D000985 3.0e-08 62.0 98 45.9
Haze_18068 Corylus avellana HOM05D000213 ORTHO05D000985 3.0e-08 62.0 98 45.9
FvH4_2g33920 Fragaria vesca HOM05D000213 ORTHO05D000985 3.0e-08 62.0 103 40.8
FAN23G0780 Fragaria x ananassa HOM05D000213 ORTHO05D000985 3.0e-08 62.0 97 43.3
FAN24G2110 Fragaria x ananassa HOM05D000213 ORTHO05D000985 3.0e-08 62.0 103 40.8
Manes.13G119700 Manihot esculenta HOM05D000213 ORTHO05D000985 3.0e-08 62.0 104 43.3
THA.LOC104800324 Tarenaya hassleriana HOM05D000213 ORTHO05D000985 3.0e-08 62.0 106 43.4
VMungo1215G0378 Vigna mungo HOM05D000213 ORTHO05D000985 3.0e-08 62.0 102 43.1
Duzib147G1551 Durio zibethinus HOM05D000213 ORTHO05D000985 3.9e-08 61.6 110 42.7
Lsat_1_v5_gn_1_22221 Lactuca sativa HOM05D000213 ORTHO05D000985 3.9e-08 61.6 97 45.4
Phvul.002G016100 Phaseolus vulgaris HOM05D000213 ORTHO05D000985 3.9e-08 61.6 94 44.7
Prupe.6G230600 Prunus persica HOM05D000213 ORTHO05D000985 3.9e-08 61.6 103 42.7
Potri.007G047400 Populus trichocarpa HOM05D000213 ORTHO05D000985 5.1e-08 61.2 103 41.7
Sc02g0007490 Simmondsia chinensis HOM05D000213 ORTHO05D000985 5.1e-08 61.2 88 46.6
MSTRG.23722 Avicennia marina HOM05D000213 ORTHO05D000985 6.7e-08 60.8 98 42.9
Glyma.01G189100 Glycine max HOM05D000213 ORTHO05D000985 6.7e-08 60.8 103 41.7
MD08G1094900 Malus domestica HOM05D000213 ORTHO05D000985 6.7e-08 60.8 98 43.9
Thecc.01G061900 Theobroma cacao HOM05D000213 ORTHO05D000985 6.7e-08 60.8 110 42.7
Lj4C766T4 Lonicera japonica HOM05D000213 ORTHO05D000985 8.7e-08 60.5 111 46.8
Nitab4.5_0004730g0010 Nicotiana tabacum HOM05D000213 ORTHO05D000985 8.7e-08 60.5 99 47.5
Nitab4.5_0005992g0010 Nicotiana tabacum HOM05D000213 ORTHO05D000985 8.7e-08 60.5 99 47.5
Peaxi162Scf00800g00054 Petunia axillaris HOM05D000213 ORTHO05D000985 8.7e-08 60.5 104 40.4
PGR004G1084 Punica granatum HOM05D000213 ORTHO05D000985 8.7e-08 60.5 100 43.0
arahy.Tifrunner.gnm1.ann1.S25UJZ Arachis hypogaea HOM05D000213 ORTHO05D000985 1.1e-07 60.1 94 44.7
CiPaw.01G014300 Carya illinoinensis HOM05D000213 ORTHO05D000985 1.1e-07 60.1 110 42.7
Manes.12G107400 Manihot esculenta HOM05D000213 ORTHO05D000985 1.1e-07 60.1 102 43.1
Hund11142 Selenicereus undatus HOM05D000213 ORTHO05D000985 1.1e-07 60.1 98 43.9
TPR.G14579 Trifolium pratense HOM05D000213 ORTHO05D000985 1.1e-07 60.1 101 42.6
Cc07_g06340 Coffea canephora HOM05D000213 ORTHO05D000985 1.5e-07 59.7 106 43.4
HanXRQChr10g0286841 Helianthus annuus HOM05D000213 ORTHO05D000985 1.5e-07 59.7 97 45.4
MD15G1078200 Malus domestica HOM05D000213 ORTHO05D000985 1.5e-07 59.7 98 43.9
Nn5g30385 Nelumbo nucifera HOM05D000213 ORTHO05D000985 1.5e-07 59.7 107 43.0
RcHm_v2.0_Chr6g0308491 Rosa chinensis HOM05D000213 ORTHO05D000985 1.5e-07 59.7 103 39.8
vmacro21490 Vaccinium macrocarpon HOM05D000213 ORTHO05D000985 1.5e-07 59.7 97 43.3
arahy.Tifrunner.gnm1.ann1.EDW718 Arachis hypogaea HOM05D000213 ORTHO05D000985 1.9e-07 59.3 107 40.2
Eucgr.F00187 Eucalyptus grandis HOM05D000213 ORTHO05D000985 1.9e-07 59.3 96 40.6
Lj5g0021227 Lotus japonicus HOM05D000213 ORTHO05D000985 1.9e-07 59.3 96 41.7
Manes.05G176800 Manihot esculenta HOM05D000213 ORTHO05D000985 1.9e-07 59.3 97 44.3
QL06p040302 Quercus lobata HOM05D000213 ORTHO05D000985 1.9e-07 59.3 112 42.9
SalBow6G2562 Salvia bowleyana HOM05D000213 ORTHO05D000985 1.9e-07 59.3 100 44.0
Duzib187G1286 Durio zibethinus HOM05D000213 ORTHO05D000985 2.5e-07 58.9 109 38.5
Oeu044199.1 Olea europaea HOM05D000213 ORTHO05D000985 2.5e-07 58.9 113 44.2
MSTRG.22245 Avicennia marina HOM05D000213 ORTHO05D000985 3.3e-07 58.5 99 43.4
Cc10_g04810 Coffea canephora HOM05D000213 ORTHO05D000985 3.3e-07 58.5 114 42.1
Duzib264G0290 Durio zibethinus HOM05D000213 ORTHO05D000985 3.3e-07 58.5 104 41.3
FAN05G3897 Fragaria x ananassa HOM05D000213 ORTHO05D000985 3.3e-07 58.5 97 43.3
FAN20G0329 Fragaria x ananassa HOM05D000213 ORTHO05D000985 3.3e-07 58.5 103 40.8
Glyma.17G239200 Glycine max HOM05D000213 ORTHO05D000985 3.3e-07 58.5 98 41.8
Nn1g04751 Nelumbo nucifera HOM05D000213 ORTHO05D000985 3.3e-07 58.5 110 42.7
Sabra14G0016400 Salix brachista HOM05D000213 ORTHO05D000985 3.3e-07 58.5 97 42.3
SalBow7G2066 Salvia bowleyana HOM05D000213 ORTHO05D000985 3.3e-07 58.5 99 43.4
TWI56G1195 Tripterygium wilfordii HOM05D000213 ORTHO05D000985 3.3e-07 58.5 97 41.2
TAR628G0967 Trochodendron aralioides HOM05D000213 ORTHO05D000985 3.3e-07 58.5 110 41.8
MSTRG.2862 Avicennia marina HOM05D000213 ORTHO05D000985 4.3e-07 58.2 106 41.5
CsaV3_6G043450 Cucumis sativus L. HOM05D000213 ORTHO05D000985 4.3e-07 58.2 104 39.4
Lalb_Chr05g0226261 Lupinus albus HOM05D000213 ORTHO05D000985 4.3e-07 58.2 94 43.6
Psat4g085000 Pisum sativum HOM05D000213 ORTHO05D000985 4.3e-07 58.2 101 41.6
Sabra07G0042300 Salix brachista HOM05D000213 ORTHO05D000985 4.3e-07 58.2 102 40.2
Cpa.g.sc21.159 Carica papaya HOM05D000213 ORTHO05D000985 5.7e-07 57.8 111 43.2
CiPaw.02G007000 Carya illinoinensis HOM05D000213 ORTHO05D000985 5.7e-07 57.8 102 39.2
Dinv39275 Davidia involucrata HOM05D000213 ORTHO05D000985 5.7e-07 57.8 97 41.2
FAN27G0246 Fragaria x ananassa HOM05D000213 ORTHO05D000985 5.7e-07 57.8 103 39.8
GSVIVG01009441001 Vitis vinifera HOM05D000213 ORTHO05D000985 5.7e-07 57.8 97 43.3
Atru.chr3.267 Acer truncatum HOM05D000213 ORTHO05D000985 7.4e-07 57.4 106 44.3
Medtr4g094908 Medicago truncatula HOM05D000213 ORTHO05D000985 7.4e-07 57.4 105 42.9
QL02p004033 Quercus lobata HOM05D000213 ORTHO05D000985 7.4e-07 57.4 97 45.4
THA.LOC104807597 Tarenaya hassleriana HOM05D000213 ORTHO05D000985 7.4e-07 57.4 86 41.9
TWI09G0426 Tripterygium wilfordii HOM05D000213 ORTHO05D000985 7.4e-07 57.4 103 41.7
TWI36G1423 Tripterygium wilfordii HOM05D000213 ORTHO05D000985 7.4e-07 57.4 102 39.2
TWI73G0677 Tripterygium wilfordii HOM05D000213 ORTHO05D000985 7.4e-07 57.4 103 42.7
Manes.18G041000 Manihot esculenta HOM05D000213 ORTHO05D000985 9.6e-07 57.0 97 44.3
Oeu013239.1 Olea europaea HOM05D000213 ORTHO05D000985 9.6e-07 57.0 103 39.8
Sabra02G0096700 Salix brachista HOM05D000213 ORTHO05D000985 9.6e-07 57.0 111 42.3
Solyc04g078550.3 Solanum lycopersicum HOM05D000213 ORTHO05D000985 9.6e-07 57.0 114 42.1
Sopen04g032150 Solanum pennellii HOM05D000213 ORTHO05D000985 9.6e-07 57.0 114 42.1
PGSC0003DMG400007947 Solanum tuberosum HOM05D000213 ORTHO05D000985 9.6e-07 57.0 114 42.1
SGA_v2.0_scaffold28G11803 Striga asiatica HOM05D000213 ORTHO05D000985 9.6e-07 57.0 98 43.9
TAR625G0234 Trochodendron aralioides HOM05D000213 ORTHO05D000985 9.6e-07 57.0 110 40.9
Migut.N02732 Erythranthe guttata HOM05D000213 ORTHO05D000985 1.3e-06 56.6 96 43.8
Glyma.17G168900 Glycine max HOM05D000213 ORTHO05D000985 1.3e-06 56.6 96 42.7
Psat0s1867g0040 Pisum sativum HOM05D000213 ORTHO05D000985 1.3e-06 56.6 83 42.2
Ciclev10001636m.g Citrus clementina HOM05D000213 ORTHO05D000985 1.6e-06 56.2 96 40.6
Gohir.D05G264300 Gossypium hirsutum HOM05D000213 ORTHO05D000985 1.6e-06 56.2 93 41.9
Gorai.009G276100 Gossypium raimondii HOM05D000213 ORTHO05D000985 1.6e-06 56.2 93 41.9
PSO170G6233 Papaver somniferum HOM05D000213 ORTHO05D000985 1.6e-06 56.2 101 37.6
PSO210G7279 Papaver somniferum HOM05D000213 ORTHO05D000985 1.6e-06 56.2 101 37.6
Potri.014G024200 Populus trichocarpa HOM05D000213 ORTHO05D000985 1.6e-06 56.2 97 41.2
Ciclev10025925m.g Citrus clementina HOM05D000213 ORTHO05D000985 2.1e-06 55.8 103 39.8
Gohir.A05G262000 Gossypium hirsutum HOM05D000213 ORTHO05D000985 2.1e-06 55.8 93 41.9
Lsat_1_v5_gn_4_127960 Lactuca sativa HOM05D000213 ORTHO05D000985 2.1e-06 55.8 97 42.3
SGA_v2.0_scaffold14G06981 Striga asiatica HOM05D000213 ORTHO05D000985 2.1e-06 55.8 98 42.9
Ca_22130_v3 Cicer arietinum L. HOM05D000213 ORTHO05D000985 2.8e-06 55.5 101 42.6
Dinv26853 Davidia involucrata HOM05D000213 ORTHO05D000985 2.8e-06 55.5 114 41.2
Sed0023555 Sechium edule HOM05D000213 ORTHO05D000985 2.8e-06 55.5 102 39.2
Aqoxy5G01171 Aquilegia oxysepala HOM05D000213 ORTHO05D000985 3.7e-06 55.1 110 40.0
EL10Ac6g15704 Beta vulgaris HOM05D000213 ORTHO05D000985 3.7e-06 55.1 92 40.2
ECA232G4613 Erigeron canadensis HOM05D000213 ORTHO05D000985 3.7e-06 55.1 111 42.3
Glyma.05G096500 Glycine max HOM05D000213 ORTHO05D000985 3.7e-06 55.1 88 42.0
Peaxi162Scf00121g00018 Petunia axillaris HOM05D000213 ORTHO05D000985 3.7e-06 55.1 100 41.0
Atru.chr13.744 Acer truncatum HOM05D000213 ORTHO05D000985 4.8e-06 54.7 100 40.0
TAR376G0141 Trochodendron aralioides HOM05D000213 ORTHO05D000985 4.8e-06 54.7 110 39.1
GSVIVG01022067001 Vitis vinifera HOM05D000213 ORTHO05D000985 4.8e-06 54.7 111 41.4
Ah.03g145730 Amaranthus hybridus HOM05D000213 ORTHO05D000985 6.2e-06 54.3 94 38.3
Gohir.A05G205000 Gossypium hirsutum HOM05D000213 ORTHO05D000985 6.2e-06 54.3 99 40.4
Lj4g0004953 Lotus japonicus HOM05D000213 ORTHO05D000985 6.2e-06 54.3 80 41.2
BcaB07g33257 Brassica carinata HOM05D012494 ORTHO05D095169 8.2e-06 53.9 34 79.4
Dinv35930 Davidia involucrata HOM05D000213 ORTHO05D000985 8.2e-06 53.9 97 42.3
Gohir.D05G208300 Gossypium hirsutum HOM05D000213 ORTHO05D000985 8.2e-06 53.9 97 42.3
Gorai.009G214800 Gossypium raimondii HOM05D000213 ORTHO05D000985 8.2e-06 53.9 97 42.3
Potri.005G141400 Populus trichocarpa HOM05D000213 ORTHO05D000985 8.2e-06 53.9 104 38.5


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