Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g16751 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-121 438.7 215 100.0
BcaC03g16198 Brassica carinata HOM05D003835 ORTHO05D004930 4.4e-89 331.6 202 78.7
BolC2t11376H Brassica oleracea HOM05D003835 ORTHO05D004930 4.4e-73 278.5 173 83.2
BcaB06g26790 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-57 226.5 209 56.9
BolC3t19175H Brassica oleracea HOM05D003835 ORTHO05D004930 4.9e-56 221.9 208 58.2
BcaB08g35438 Brassica carinata HOM05D003835 ORTHO05D004930 7.8e-46 188.0 188 53.2
BcaB04g18230 Brassica carinata HOM05D003835 ORTHO05D004930 8.6e-45 184.5 171 54.4
BcaC04g20885 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-44 183.0 203 50.7
BcaC06g35835 Brassica carinata HOM05D003835 ORTHO05D004930 9.5e-44 181.0 116 75.0
BcaB08g35159 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-43 180.6 134 64.9
BcaC05g28049 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-41 173.3 191 51.8
BraA05t21178Z Brassica rapa HOM05D003835 ORTHO05D004930 2.6e-41 172.9 202 47.5
BcaC09g48541 Brassica carinata HOM05D003835 ORTHO05D004930 3.4e-41 172.6 154 55.8
BcaB02g11345 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-39 167.2 138 63.0
BcaC03g17352 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-39 167.2 129 68.2
BcaC06g35919 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-39 167.2 198 50.5
BcaC06g35162 Brassica carinata HOM05D003835 ORTHO05D004930 5.4e-39 165.2 152 56.6
BcaC03g16228 Brassica carinata HOM05D003835 ORTHO05D004930 6.0e-38 161.8 145 57.2
BcaB03g16212 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-36 157.5 173 49.1
BcaC08g44357 Brassica carinata HOM05D003835 ORTHO05D004930 3.3e-36 156.0 140 57.1
BcaC09g50045 Brassica carinata HOM05D003835 ORTHO05D004930 3.3e-36 156.0 177 51.4
BraA09t38710Z Brassica rapa HOM05D003835 ORTHO05D019916 1.4e-34 150.6 107 67.3
BcaC03g14834 Brassica carinata HOM05D003835 ORTHO05D004930 4.0e-34 149.1 140 53.6
BcaC09g49877 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-31 139.8 126 60.3
BcaB03g16388 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-29 133.7 139 53.2
BcaC03g16557 Brassica carinata HOM05D007458 ORTHO05D009533 3.0e-29 132.9 142 45.1
BcaC01g02049 Brassica carinata HOM05D003835 ORTHO05D004930 3.3e-28 129.4 140 52.1
Carub.0008s0643 Capsella rubella HOM05D003835 ORTHO05D004930 5.6e-28 128.6 171 39.8
A04p11820 Brassica napus HOM05D003835 ORTHO05D004930 3.1e-26 122.9 93 59.1
BcaB01g01339 Brassica carinata HOM05D003835 ORTHO05D004930 3.8e-24 115.9 163 40.5
BolC6t37001H Brassica oleracea HOM05D003835 ORTHO05D004930 1.1e-23 114.4 84 72.6
BolC8t47803H Brassica oleracea HOM05D003835 ORTHO05D004930 2.4e-23 113.2 111 55.0
BcaC05g27589 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-22 110.5 156 39.7
BolC8t47793H Brassica oleracea HOM05D003835 ORTHO05D004930 3.5e-22 109.4 174 36.2
BcaC08g43746 Brassica carinata HOM05D003835 ORTHO05D004930 6.0e-22 108.6 126 42.9
BcaC01g01952 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-21 107.1 145 40.7
BcaC04g20985 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-21 106.3 138 42.0
BcaC07g37476 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-20 104.4 157 38.9
AL4G20670 Arabidopsis lyrata HOM05D003835 ORTHO05D004930 1.5e-20 104.0 168 37.5
BcaB07g33106 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-20 104.0 158 38.0
BcaC04g20991 Brassica carinata HOM05D003835 ORTHO05D004930 3.3e-20 102.8 138 42.0
BcaC06g36461 Brassica carinata HOM05D003835 ORTHO05D004930 4.3e-20 102.4 141 39.0
BcaC02g10813 Brassica carinata HOM05D003835 ORTHO05D004930 7.3e-20 101.7 185 33.0
BcaC03g16677 Brassica carinata HOM05D003835 ORTHO05D004930 2.8e-19 99.8 130 40.0
BcaC03g16671 Brassica carinata HOM05D003835 ORTHO05D004930 6.2e-19 98.6 151 37.7
BcaC03g17353 Brassica carinata HOM05D003835 ORTHO05D004930 6.2e-19 98.6 143 38.5
BcaB06g26909 Brassica carinata HOM05D003835 ORTHO05D004930 8.1e-19 98.2 163 36.8
BolC5t32809H Brassica oleracea HOM05D007458 ORTHO05D009533 1.4e-18 97.4 108 43.5
BcaC05g27575 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-18 96.7 118 43.2
BcaC04g20889 Brassica carinata HOM05D003835 ORTHO05D004930 3.1e-18 96.3 127 41.7
BcaC05g27887 Brassica carinata HOM05D003835 ORTHO05D004930 4.0e-18 95.9 118 42.4
BcaC06g36790 Brassica carinata HOM05D003835 ORTHO05D004930 4.0e-18 95.9 121 42.1
BcaC09g49698 Brassica carinata HOM05D003835 ORTHO05D004930 4.0e-18 95.9 113 44.2
BcaC03g16196 Brassica carinata HOM05D003835 ORTHO05D004930 6.9e-18 95.1 137 39.4
BolC9t56675H Brassica oleracea HOM05D003835 ORTHO05D004930 1.5e-17 94.0 94 54.3
BcaC09g49552 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-17 93.6 114 41.2
BcaC09g49753 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-17 93.6 127 38.6
BcaC05g27891 Brassica carinata HOM05D003835 ORTHO05D004930 3.4e-17 92.8 113 42.5
BcaC04g20623 Brassica carinata HOM05D003835 ORTHO05D004930 5.8e-17 92.0 130 40.8
BolC4t24052H Brassica oleracea HOM05D003835 ORTHO05D004930 9.9e-17 91.3 130 40.0
BcaC01g02043 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-16 90.5 181 33.7
BcaC04g20891 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-16 90.5 138 38.4
BcaC05g28699 Brassica carinata HOM05D007458 ORTHO05D009533 2.9e-16 89.7 104 46.2
BcaB07g33499 Brassica carinata HOM05D003835 ORTHO05D004930 3.8e-16 89.4 69 63.8
BcaC09g49628 Brassica carinata HOM05D003835 ORTHO05D004930 3.8e-16 89.4 92 54.3
BcaC01g02153 Brassica carinata HOM05D003835 ORTHO05D004930 4.9e-16 89.0 107 44.9
BcaC04g20843 Brassica carinata HOM05D003835 ORTHO05D004930 8.4e-16 88.2 123 39.8
BcaNung05987 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-15 87.4 107 43.9
BcaC04g20805 Brassica carinata HOM05D003835 ORTHO05D004930 4.2e-15 85.9 109 42.2
BraA08t32789Z Brassica rapa HOM05D003835 ORTHO05D004930 4.2e-15 85.9 82 52.4
BraA08t32793Z Brassica rapa HOM05D007458 ORTHO05D009533 7.1e-15 85.1 86 43.0
BcaC09g49664 Brassica carinata HOM05D003835 ORTHO05D004930 4.6e-14 82.4 106 39.6
BcaB01g01376 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-13 80.1 105 41.0
BcaB06g26993 Brassica carinata HOM05D007458 ORTHO05D009533 8.7e-13 78.2 171 31.0
BcaC01g02168 Brassica carinata HOM05D003835 ORTHO05D004930 8.7e-13 78.2 89 43.8
CARHR257890 Cardamine hirsuta HOM05D003835 ORTHO05D004930 1.9e-12 77.0 107 38.3
BolC5t32563H Brassica oleracea HOM05D003835 ORTHO05D004930 2.5e-12 76.6 74 59.5
BolC8t50199H Brassica oleracea HOM05D003835 ORTHO05D004930 2.5e-12 76.6 107 40.2
BcaC05g28705 Brassica carinata HOM05D065486 ORTHO05D004930 7.4e-12 75.1 37 91.9
BcaC08g42800 Brassica carinata HOM05D003835 ORTHO05D004930 7.4e-12 75.1 82 51.2
BcaC04g20888 Brassica carinata HOM05D003835 ORTHO05D004930 9.6e-12 74.7 80 45.0
BcaC02g10560 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-11 74.3 165 29.7
BcaB01g01286 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-11 73.9 129 36.4
BcaC07g39533 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-11 72.8 105 39.0
BcaC03g16445 Brassica carinata HOM05D003835 ORTHO05D004930 4.8e-11 72.4 137 33.6
BcaC04g20857 Brassica carinata HOM05D003835 ORTHO05D004930 8.1e-11 71.6 138 34.1
BcaC06g35964 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-10 70.9 140 32.9
Thhalv10002744m.g Eutrema salsugineum HOM05D003835 ORTHO05D004930 1.8e-10 70.5 76 39.5
BcaC06g36022 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-10 70.1 118 36.4
BcaC02g10732 Brassica carinata HOM05D003835 ORTHO05D004930 3.1e-10 69.7 143 31.5
BraA08t32788Z Brassica rapa HOM05D003835 ORTHO05D004930 5.3e-10 68.9 86 47.7
SalBow5G1224 Salvia bowleyana HOM05D010617 ORTHO05D011805 5.3e-10 68.9 115 35.7
SalBow5G2537 Salvia bowleyana HOM05D010617 ORTHO05D011805 5.3e-10 68.9 115 35.7
Rhsim08G0029200 Rhododendron simsii HOM05D009413 ORTHO05D000116 9.0e-10 68.2 175 28.6
BraA05t21182Z Brassica rapa HOM05D003835 ORTHO05D004930 1.5e-09 67.4 95 36.8
CANSAT35G0823 Cannabis sativa HOM05D014149 ORTHO05D004930 1.5e-09 67.4 170 30.6
BcaC01g02336 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-09 67.0 93 38.7
BcaC03g16558 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-09 67.0 203 28.1
BcaC01g02254 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-09 66.6 74 51.4
BcaC07g37248 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-09 66.6 89 39.3
BcaC07g37517 Brassica carinata HOM05D003835 ORTHO05D004930 3.4e-09 66.2 64 43.8
SalBow5G1603 Salvia bowleyana HOM05D010617 ORTHO05D011805 7.6e-09 65.1 160 30.0
SalBow5G4492 Salvia bowleyana HOM05D010617 ORTHO05D011805 2.2e-08 63.5 102 34.3
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 6.4e-08 62.0 120 30.0
CSS0015805 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D012209 8.4e-08 61.6 134 29.1
SalBow5G3953 Salvia bowleyana HOM05D010617 ORTHO05D011805 1.4e-07 60.8 100 34.0
QL05p071009 Quercus lobata HOM05D013248 ORTHO05D000116 1.9e-07 60.5 160 28.8
Oeu021590.1 Olea europaea HOM05D002774 ORTHO05D000116 5.5e-07 58.9 124 29.0
Oeu022668.1 Olea europaea HOM05D002774 ORTHO05D000116 7.1e-07 58.5 83 34.9
Oeu022696.1 Olea europaea HOM05D002774 ORTHO05D000116 7.1e-07 58.5 85 35.3
Oeu037847.1 Olea europaea HOM05D002774 ORTHO05D000116 7.1e-07 58.5 130 29.2
Oeu063908.1 Olea europaea HOM05D002774 ORTHO05D000116 7.1e-07 58.5 150 27.3
SalBow8G4289 Salvia bowleyana HOM05D010617 ORTHO05D011805 7.1e-07 58.5 95 36.8
Oeu052961.1 Olea europaea HOM05D002774 ORTHO05D000116 9.3e-07 58.2 133 30.1
BcaB03g16145 Brassica carinata HOM05D007458 ORTHO05D009533 1.2e-06 57.8 78 38.5
CANSAT01G2276 Cannabis sativa HOM05D014149 ORTHO05D011451 1.2e-06 57.8 112 34.8
Ciclev10017562m.g Citrus clementina HOM05D009413 ORTHO05D000116 1.6e-06 57.4 75 36.0
Ciclev10019154m.g Citrus clementina HOM05D009413 ORTHO05D000116 1.6e-06 57.4 75 36.0
Oeu011294.1 Olea europaea HOM05D002774 ORTHO05D000116 1.6e-06 57.4 138 29.7
QL04p042823 Quercus lobata HOM05D009413 ORTHO05D000116 1.6e-06 57.4 154 29.2
QL05p031643 Quercus lobata HOM05D009413 ORTHO05D000116 1.6e-06 57.4 145 27.6
QL10p041460 Quercus lobata HOM05D009413 ORTHO05D000116 1.6e-06 57.4 145 27.6
QL11p005301 Quercus lobata HOM05D009413 ORTHO05D000116 1.6e-06 57.4 145 27.6
QL11p042019 Quercus lobata HOM05D003372 ORTHO05D000116 1.6e-06 57.4 183 26.2
Oeu051288.1 Olea europaea HOM05D002774 ORTHO05D000116 2.1e-06 57.0 151 27.2
QL02p091007 Quercus lobata HOM05D009413 ORTHO05D000116 2.1e-06 57.0 87 33.3
BcaB01g01100 Brassica carinata HOM05D003835 ORTHO05D004930 2.7e-06 56.6 73 42.5
Oeu048175.1 Olea europaea HOM05D002774 ORTHO05D000116 2.7e-06 56.6 132 28.0
BcaC09g48282 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-06 56.2 88 36.4
QL03p072853 Quercus lobata HOM05D009413 ORTHO05D000116 3.5e-06 56.2 145 28.3
QL03p072862 Quercus lobata HOM05D009413 ORTHO05D000116 3.5e-06 56.2 145 28.3
QL04p089085 Quercus lobata HOM05D009413 ORTHO05D000116 3.5e-06 56.2 145 28.3
QL10p025857 Quercus lobata HOM05D009413 ORTHO05D000116 3.5e-06 56.2 87 34.5
BcaB05g23456 Brassica carinata HOM05D003835 ORTHO05D004930 4.6e-06 55.8 77 40.3
CSS0043108 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D012209 6.0e-06 55.5 82 32.9
CSS0045382 Camellia sinensis var. sinensis HOM05D003552 ORTHO05D006018 6.0e-06 55.5 129 29.5
Oeu013952.1 Olea europaea HOM05D002774 ORTHO05D000116 6.0e-06 55.5 117 29.9
QL10p064222 Quercus lobata HOM05D000009 ORTHO05D000116 6.0e-06 55.5 145 27.6
Oeu028351.1 Olea europaea HOM05D002774 ORTHO05D000116 7.9e-06 55.1 85 34.1
QL10p046964 Quercus lobata HOM05D009413 ORTHO05D000116 7.9e-06 55.1 87 33.3


User provided reference genes

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