Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g16710 Brassica carinata HOM05D000117 ORTHO05D091402 3.1e-63 245.0 123 100.0
BolC6t38235H Brassica oleracea HOM05D000117 ORTHO05D000070 2.8e-16 89.0 71 67.6
BolC8t49713H Brassica oleracea HOM05D000117 ORTHO05D000070 3.7e-16 88.6 65 73.8
C02p34460 Brassica napus HOM05D000117 ORTHO05D000070 4.8e-16 88.2 45 93.3
BolC2t10741H Brassica oleracea HOM05D000117 ORTHO05D000070 4.1e-15 85.1 75 65.3
CARHR279630 Cardamine hirsuta HOM05D000117 ORTHO05D000070 7.7e-14 80.9 79 64.6
Sp2g28750 Schrenkiella parvula HOM05D000117 ORTHO05D000070 2.9e-13 79.0 77 64.9
Aa31LG1G16400 Aethionema arabicum HOM05D000117 ORTHO05D000070 5.0e-13 78.2 76 63.2
BcaC01g02805 Brassica carinata HOM05D000117 ORTHO05D000070 6.5e-13 77.8 70 65.7
C03p60090 Brassica napus HOM05D000117 ORTHO05D000070 6.5e-13 77.8 70 65.7
BolC3t18272H Brassica oleracea HOM05D000117 ORTHO05D000070 6.5e-13 77.8 70 65.7
Carub.0008s2654 Capsella rubella HOM05D000117 ORTHO05D000070 8.5e-13 77.4 78 62.8
AL735U10010 Arabidopsis lyrata HOM05D000117 ORTHO05D000070 1.4e-12 76.6 77 63.6
AL8G43260 Arabidopsis lyrata HOM05D000117 ORTHO05D000070 1.4e-12 76.6 77 63.6
AT5G65670 Arabidopsis thaliana HOM05D000117 ORTHO05D000070 2.5e-12 75.9 77 63.6
A06p32500 Brassica napus HOM05D000117 ORTHO05D000070 4.2e-12 75.1 70 64.3
BraA06t26174Z Brassica rapa HOM05D000117 ORTHO05D000070 4.2e-12 75.1 70 64.3
Thhalv10004532m.g Eutrema salsugineum HOM05D000117 ORTHO05D000070 4.2e-12 75.1 76 61.8
BcaC01g02847 Brassica carinata HOM05D000117 ORTHO05D000070 5.5e-12 74.7 70 62.9
BcaC03g16820 Brassica carinata HOM05D000117 ORTHO05D000070 1.6e-11 73.2 70 61.4
THA.LOC104819281 Tarenaya hassleriana HOM05D000117 ORTHO05D000070 6.1e-11 71.2 75 60.0
BcaB04g20024 Brassica carinata HOM05D000117 ORTHO05D000070 1.4e-10 70.1 73 61.6
THA.LOC104798476 Tarenaya hassleriana HOM05D000117 ORTHO05D000070 5.1e-10 68.2 71 59.2
C09p10630 Brassica napus HOM05D000117 ORTHO05D000070 6.7e-10 67.8 73 58.9
A09p09120 Brassica napus HOM05D000117 ORTHO05D000070 1.5e-09 66.6 78 53.8
BraA09t36563Z Brassica rapa HOM05D000117 ORTHO05D000070 7.4e-09 64.3 78 53.8
BcaC04g23253 Brassica carinata HOM05D000117 ORTHO05D000070 9.7e-09 63.9 73 58.9
BolC1t03942H Brassica oleracea HOM05D000117 ORTHO05D000070 3.1e-07 58.9 54 63.0
C02p46930 Brassica napus HOM05D000117 ORTHO05D000070 2.6e-06 55.8 54 57.4


User provided reference genes

Program Settings