Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g16705 Brassica carinata HOM05D009858 ORTHO05D011870 3.7e-63 244.6 114 100.0
BolC2t10569H Brassica oleracea HOM05D009858 ORTHO05D011870 5.2e-41 171.0 89 92.1
A02p28730 Brassica napus HOM05D009858 ORTHO05D011870 2.2e-39 165.6 89 89.9
BraA02t07908Z Brassica rapa HOM05D009858 ORTHO05D011870 3.7e-39 164.9 89 89.9
C02p45430 Brassica napus HOM05D009858 ORTHO05D011870 1.4e-38 162.9 89 88.8
Thhalv10001232m.g Eutrema salsugineum HOM05D009858 ORTHO05D011870 9.2e-30 133.7 109 65.1
BcaB07g30491 Brassica carinata HOM05D009858 ORTHO05D011870 7.8e-29 130.6 111 59.5
Carub.0008s0347 Capsella rubella HOM05D009858 ORTHO05D011870 9.3e-22 107.1 112 58.0
CARHR226780 Cardamine hirsuta HOM05D009858 ORTHO05D011870 3.0e-20 102.1 113 54.0
AT4G20000 Arabidopsis thaliana HOM05D009858 ORTHO05D011870 1.9e-19 99.4 108 52.8
AL7G33860 Arabidopsis lyrata HOM05D009858 ORTHO05D011870 7.3e-19 97.4 108 52.8
Thhalv10026244m.g Eutrema salsugineum HOM05D009858 ORTHO05D011870 2.1e-18 95.9 114 50.9
BcaB03g11653 Brassica carinata HOM05D009858 ORTHO05D011870 2.8e-18 95.5 113 51.3
C03p82680 Brassica napus HOM05D009858 ORTHO05D011870 3.6e-18 95.1 97 56.7
BolC3t20549H Brassica oleracea HOM05D009858 ORTHO05D011870 3.6e-18 95.1 97 56.7
Carub.0007s2113 Capsella rubella HOM05D009858 ORTHO05D011870 6.2e-18 94.4 109 52.3
BcaC01g00649 Brassica carinata HOM05D009858 ORTHO05D011870 1.1e-17 93.6 97 55.7
A01p11810 Brassica napus HOM05D009858 ORTHO05D011870 1.4e-17 93.2 125 48.0
BraA01t01123Z Brassica rapa HOM05D009858 ORTHO05D011870 1.4e-17 93.2 125 48.0
Aa31LG6G2430 Aethionema arabicum HOM05D004352 ORTHO05D000003 4.0e-17 91.7 110 50.0
C01p14010 Brassica napus HOM05D009858 ORTHO05D011870 2.6e-16 89.0 98 51.0
BolC1t01368H Brassica oleracea HOM05D009858 ORTHO05D011870 2.6e-16 89.0 98 51.0
BcaNung01737 Brassica carinata HOM05D009858 ORTHO05D011870 3.4e-16 88.6 124 43.5
BcaC09g51353 Brassica carinata HOM05D009858 ORTHO05D011870 4.5e-16 88.2 98 51.0
Sp7g18460 Schrenkiella parvula HOM05D009858 ORTHO05D011870 2.2e-15 85.9 80 60.0
THA.LOC104806220 Tarenaya hassleriana HOM05D009858 ORTHO05D011870 3.9e-12 75.1 69 56.5
THA.LOC104806977 Tarenaya hassleriana HOM05D009858 ORTHO05D011870 1.1e-06 57.0 115 40.9


User provided reference genes

Program Settings