Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 5.0e-139 498.0 304 100.0
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 3.3e-98 362.5 239 82.4
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 3.1e-96 355.9 250 80.4
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 3.1e-96 355.9 250 80.4
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 4.0e-96 355.5 250 79.6
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 7.0e-93 344.7 250 77.6
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 2.7e-92 342.8 250 77.6
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 2.7e-92 342.8 250 77.6
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 2.3e-91 339.7 250 76.8
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 7.3e-90 334.7 250 76.4
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 3.6e-89 332.4 250 77.2
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 3.6e-89 332.4 250 77.2
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 6.2e-89 331.6 219 82.6
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 1.8e-88 330.1 250 75.6
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 4.9e-86 322.0 250 74.4
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 6.0e-84 315.1 257 73.5
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 5.6e-82 308.5 253 73.5
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 5.6e-82 308.5 253 73.5
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 5.6e-82 308.5 253 73.5
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 7.3e-82 308.1 250 72.8
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 4.7e-81 305.4 257 72.0
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 1.1e-80 304.3 240 73.8
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 2.0e-79 300.1 257 71.2
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 1.3e-78 297.4 234 75.2
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-77 293.9 198 80.8
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 2.4e-77 293.1 256 69.9
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 3.2e-77 292.7 208 78.8
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 7.3e-74 281.6 187 84.0
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 8.1e-73 278.1 206 75.2
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-72 276.6 208 75.0
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 6.8e-72 275.0 257 67.3
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 1.5e-71 273.9 251 67.3
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 2.6e-71 273.1 235 71.1
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 1.3e-70 270.8 257 66.5
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 4.9e-70 268.9 251 66.1
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 3.2e-69 266.2 250 65.6
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 4.3e-66 255.8 244 63.9
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-64 250.4 181 79.0
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 9.0e-64 248.1 250 62.8
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 2.6e-63 246.5 217 67.7
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 5.8e-63 245.4 158 82.3
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 9.9e-63 244.6 208 68.8
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 1.7e-62 243.8 182 76.9
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 3.2e-61 239.6 160 82.5
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 3.0e-59 233.0 149 83.9
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 1.5e-58 230.7 250 58.8
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 5.6e-58 228.8 189 70.9
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-56 224.2 196 68.9
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 2.4e-56 223.4 135 88.1
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 2.0e-55 220.3 254 58.3
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 2.6e-55 219.9 222 62.2
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 7.6e-55 218.4 178 71.3
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-53 214.2 129 87.6
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 1.4e-53 214.2 251 57.0
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 1.9e-53 213.8 176 71.6
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 4.2e-53 212.6 254 57.9
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-51 207.6 143 80.4
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 3.9e-51 206.1 251 55.8
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 2.5e-50 203.4 220 59.5
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 2.5e-50 203.4 179 67.0
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 5.6e-50 202.2 237 57.8
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 4.8e-49 199.1 143 78.3
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 8.1e-49 198.4 179 66.5
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-48 198.0 178 66.3
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 1.8e-48 197.2 234 56.8
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 3.1e-48 196.4 248 55.2
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 5.3e-48 195.7 169 69.2
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 6.9e-48 195.3 254 54.3
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 2.9e-46 189.9 174 67.2
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 6.5e-46 188.7 143 74.8
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 9.3e-45 184.9 134 77.6
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 1.1e-42 177.9 258 49.2
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 3.7e-41 172.9 143 70.6
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-40 170.6 128 75.0
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 9.0e-40 168.3 121 73.6
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 2.0e-39 167.2 252 50.4
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 4.5e-39 166.0 239 51.5
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 5.8e-39 165.6 174 63.2
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 1.7e-38 164.1 125 76.0
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 4.2e-37 159.5 262 48.5
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-36 157.5 167 60.5
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 1.6e-36 157.5 138 68.1
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 2.1e-36 157.1 142 66.2
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 2.1e-36 157.1 116 76.7
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 2.7e-36 156.8 217 50.7
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 3.5e-36 156.4 157 60.5
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 3.5e-36 156.4 157 60.5
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 1.3e-35 154.5 248 47.2
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 3.9e-35 152.9 203 48.8
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 3.9e-35 152.9 92 91.3
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 5.1e-35 152.5 183 55.2
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 5.1e-35 152.5 233 48.1
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 8.7e-35 151.8 116 74.1
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 1.5e-34 151.0 244 47.1
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 3.3e-34 149.8 248 47.6
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 4.3e-34 149.4 251 47.8
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 4.3e-34 149.4 252 48.0
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 9.7e-34 148.3 182 56.0
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 1.3e-33 147.9 131 69.5
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 2.8e-33 146.7 114 72.8
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 2.8e-33 146.7 114 72.8
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 4.8e-33 146.0 142 64.8
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 8.2e-33 145.2 252 44.8
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 4.1e-32 142.9 108 75.0
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 1.2e-31 141.4 248 44.8
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 5.9e-31 139.0 133 64.7
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 1.0e-30 138.3 122 67.2
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 5.0e-30 136.0 136 62.5
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 2.5e-29 133.7 116 70.7
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 3.2e-29 133.3 153 54.9
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 6.1e-28 129.0 185 48.6
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 1.4e-27 127.9 202 46.5
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 2.0e-26 124.0 164 52.4
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 2.2e-25 120.6 244 41.4
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 2.2e-25 120.6 193 46.6
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 3.7e-25 119.8 249 43.8
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 4.8e-25 119.4 247 42.5
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 9.1e-24 115.2 238 42.9
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-23 114.4 97 66.0
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 1.1e-21 108.2 168 50.6
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-21 107.8 78 73.1
BcaC01g02601 Brassica carinata HOM05D004489 ORTHO05D093224 7.2e-21 105.5 78 78.2
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 1.6e-20 104.4 153 51.0
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 2.1e-20 104.0 185 44.3
BcaNung05365 Brassica carinata HOM05D004489 ORTHO05D094850 1.0e-19 101.7 85 65.9
BcaB02g06508 Brassica carinata HOM05D004489 ORTHO05D094292 1.8e-19 100.9 206 42.7
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 6.7e-19 99.0 74 73.0
BcaB03g16158 Brassica carinata HOM05D004489 ORTHO05D091594 1.2e-15 88.2 103 56.3
A05p21970 Brassica napus HOM05D010967 ORTHO05D028117 6.5e-14 82.4 148 45.3
BraA09t38594Z Brassica rapa HOM05D010967 ORTHO05D028117 2.5e-13 80.5 123 51.2
BraA01t03541Z Brassica rapa HOM05D010967 ORTHO05D028117 4.2e-13 79.7 123 50.4
C05p32350 Brassica napus HOM05D004489 ORTHO05D033093 2.7e-12 77.0 55 74.5
BcaB04g18048 Brassica carinata HOM05D004489 ORTHO05D091089 3.6e-12 76.6 87 56.3
A03p48290 Brassica napus HOM05D010967 ORTHO05D028117 3.6e-12 76.6 122 49.2
BolC1t03480H Brassica oleracea HOM05D004489 ORTHO05D033093 6.1e-12 75.9 53 77.4
BraA01t02558Z Brassica rapa HOM05D010967 ORTHO05D108345 2.6e-10 70.5 116 48.3
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 3.3e-10 70.1 153 39.9
BcaB04g17769 Brassica carinata HOM05D004489 ORTHO05D096269 4.4e-10 69.7 158 39.9
BolC6t37761H Brassica oleracea HOM05D004489 ORTHO05D104721 7.5e-10 68.9 147 38.8
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 2.8e-09 67.0 208 32.7
BolC3t17100H Brassica oleracea HOM05D004489 ORTHO05D042334 3.7e-09 66.6 69 59.4
BraA05t21163Z Brassica rapa HOM05D010967 ORTHO05D108496 3.7e-09 66.6 72 61.1
A05p23080 Brassica napus HOM05D010967 ORTHO05D017683 1.4e-08 64.7 93 50.5
A01p19980 Brassica napus HOM05D010967 ORTHO05D017683 1.8e-08 64.3 71 60.6
A06p28060 Brassica napus HOM05D010967 ORTHO05D017683 1.8e-08 64.3 89 51.7
A09p35600 Brassica napus HOM05D010967 ORTHO05D017683 1.8e-08 64.3 71 60.6
BraA01t02827Z Brassica rapa HOM05D010967 ORTHO05D017683 1.8e-08 64.3 71 60.6
BcaB08g35162 Brassica carinata HOM05D000888 ORTHO05D000740 3.1e-08 63.5 206 34.5
BraA02t08312Z Brassica rapa HOM05D010967 ORTHO05D108770 7.0e-08 62.4 71 59.2
A01p34440 Brassica napus HOM05D010967 ORTHO05D017683 9.1e-08 62.0 93 49.5
A05p17100 Brassica napus HOM05D010967 ORTHO05D017683 9.1e-08 62.0 93 49.5
A09p48280 Brassica napus HOM05D010967 ORTHO05D017683 9.1e-08 62.0 93 49.5
A04p09850 Brassica napus HOM05D004489 ORTHO05D042334 1.2e-07 61.6 69 56.5
BcaB08g35276 Brassica carinata HOM05D008277 ORTHO05D091063 1.7e-06 57.8 40 65.0
A03p58810 Brassica napus HOM05D010967 ORTHO05D017683 2.9e-06 57.0 66 57.6
BraA05t21091Z Brassica rapa HOM05D004489 ORTHO05D033093 3.8e-06 56.6 56 64.3


User provided reference genes

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