Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g16486 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-84 316.6 155 100.0
BcaC05g28468 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-70 270.0 155 87.1
BcaC08g42951 Brassica carinata HOM05D006121 ORTHO05D009559 4.4e-67 258.1 177 76.3
BcaC05g28043 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-65 253.1 155 83.2
BcaC05g27793 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-61 239.6 177 70.1
BcaC01g02132 Brassica carinata HOM05D006121 ORTHO05D009559 3.4e-59 231.9 177 66.7
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 2.2e-58 229.2 161 70.2
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 2.2e-58 229.2 162 69.8
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 4.6e-56 221.5 157 70.1
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 3.0e-55 218.8 177 62.7
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-52 209.9 177 62.7
BcaC04g20823 Brassica carinata HOM05D006121 ORTHO05D009559 9.9e-51 203.8 123 79.7
BcaC02g09767 Brassica carinata HOM05D006121 ORTHO05D009559 3.3e-46 188.7 105 87.6
BcaC03g15126 Brassica carinata HOM05D006121 ORTHO05D009559 4.3e-46 188.3 122 77.0
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 5.6e-46 188.0 162 61.7
BcaC09g49729 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-45 186.8 177 53.7
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-44 183.7 177 54.2
BcaC04g21502 Brassica carinata HOM05D006121 ORTHO05D009559 6.9e-44 181.0 177 52.0
BcaC06g36167 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-38 162.9 153 56.9
BcaC03g16521 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-37 159.5 177 49.2
BcaC08g42838 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-37 159.5 93 79.6
BcaC08g43580 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-36 157.1 153 55.6
BcaC01g00176 Brassica carinata HOM05D006121 ORTHO05D009559 4.2e-33 145.2 82 82.9
BcaC09g50206 Brassica carinata HOM05D006121 ORTHO05D009559 2.7e-32 142.5 85 76.5
BcaC03g15823 Brassica carinata HOM05D006121 ORTHO05D009559 3.0e-31 139.0 108 63.9
BcaC03g15130 Brassica carinata HOM05D006121 ORTHO05D009559 2.5e-30 136.0 167 40.1
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 5.6e-30 134.8 110 56.4
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 7.4e-30 134.4 109 56.0
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 9.6e-30 134.0 167 40.1
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 2.8e-29 132.5 161 42.2
BcaC07g37897 Brassica carinata HOM05D006121 ORTHO05D009559 2.8e-29 132.5 109 53.2
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 6.2e-29 131.3 109 54.1
BcaC04g20762 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-28 130.6 168 38.7
BolC3t20163H Brassica oleracea HOM05D006121 ORTHO05D009559 6.9e-28 127.9 115 64.3
BcaC07g37265 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-27 127.1 110 63.6
BcaC06g35841 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-26 124.0 110 64.5
BolC7t41498H Brassica oleracea HOM05D006121 ORTHO05D009559 7.1e-25 117.9 151 43.0
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-24 117.1 109 52.3
BraA06t25079Z Brassica rapa HOM05D006121 ORTHO05D009559 1.3e-23 113.6 100 47.0
BolC9t56759H Brassica oleracea HOM05D006121 ORTHO05D009559 3.0e-23 112.5 80 57.5
BcaC03g16227 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-22 110.5 144 41.0
BcaC04g20594 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-21 106.7 120 45.0
BcaC03g16668 Brassica carinata HOM05D006121 ORTHO05D009559 4.8e-21 105.1 60 80.0
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 6.2e-21 104.8 110 42.7
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 1.8e-20 103.2 111 44.1
BcaC01g05819 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-19 100.5 167 33.5
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 2.6e-19 99.4 87 50.6
BcaC07g37903 Brassica carinata HOM05D006121 ORTHO05D009559 6.1e-16 88.2 125 38.4
C05p29190 Brassica napus HOM05D006121 ORTHO05D009559 1.9e-14 83.2 50 74.0
BolC9t58013H Brassica oleracea HOM05D006121 ORTHO05D009559 4.3e-14 82.0 138 35.5
BcaC02g10718 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-13 80.1 93 49.5
BcaB04g17962 Brassica carinata HOM05D006121 ORTHO05D009559 6.3e-13 78.2 89 42.7
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 1.4e-12 77.0 95 37.9
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 2.0e-11 73.2 95 34.7
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 1.1e-09 67.4 94 35.1
BcaC03g16745 Brassica carinata HOM05D006121 ORTHO05D009559 2.5e-09 66.2 43 74.4
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 3.2e-09 65.9 94 36.2
BcaC08g43697 Brassica carinata HOM05D006121 ORTHO05D009559 7.2e-09 64.7 43 74.4
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-08 63.5 117 31.6
Carub.0006s2663 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-08 63.5 102 31.4
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 3.6e-08 62.4 112 30.4
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 4.6e-08 62.0 113 31.9
BcaC04g22048 Brassica carinata HOM05D006121 ORTHO05D009559 6.1e-08 61.6 81 46.9
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 6.1e-08 61.6 112 30.4
BolC3t19110H Brassica oleracea HOM05D006121 ORTHO05D043263 1.0e-07 60.8 46 63.0
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-07 60.5 112 30.4
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 2.3e-07 59.7 100 32.0
Carub.0003s2742 Capsella rubella HOM05D009492 ORTHO05D011693 6.7e-07 58.2 103 32.0
CARHR174650 Cardamine hirsuta HOM05D008458 ORTHO05D010628 8.8e-07 57.8 99 31.3
Carub.0002s0916 Capsella rubella HOM05D009492 ORTHO05D011693 1.5e-06 57.0 112 29.5
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 1.5e-06 57.0 100 31.0
BcaC09g51377 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-06 56.6 116 31.0
Carub.0001s3399 Capsella rubella HOM05D008386 ORTHO05D010572 2.0e-06 56.6 109 33.9
Carub.0002s1048 Capsella rubella HOM05D009492 ORTHO05D011693 2.5e-06 56.2 93 30.1
AL4G17450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.3e-06 55.8 110 30.0


User provided reference genes

Program Settings