Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g16478 Brassica carinata HOM05D022544 ORTHO05D027214 3.0e-51 204.9 105 100.0
BcaC03g15187 Brassica carinata HOM05D022544 ORTHO05D027214 1.5e-50 202.6 105 99.0
C02p42890 Brassica napus HOM05D022544 ORTHO05D027214 2.2e-38 162.2 102 85.3
C02p27680 Brassica napus HOM05D022544 ORTHO05D027214 2.1e-20 102.4 52 98.1
BolC4t21928H Brassica oleracea HOM05D000138 ORTHO05D007692 1.9e-13 79.3 76 59.2
BcaC02g12786 Brassica carinata HOM05D000138 ORTHO05D007692 3.2e-13 78.6 69 63.8
C04p02880 Brassica napus HOM05D000138 ORTHO05D007692 3.2e-13 78.6 69 63.8
Sp4g23960 Schrenkiella parvula HOM05D000138 ORTHO05D007692 6.1e-12 74.3 72 62.5
A03p23390 Brassica napus HOM05D000138 ORTHO05D007692 1.8e-11 72.8 65 61.5
BraA03t11556Z Brassica rapa HOM05D000138 ORTHO05D007692 5.2e-11 71.2 65 60.0
BolC3t15163H Brassica oleracea HOM05D000138 ORTHO05D007692 2.0e-10 69.3 69 59.4
C03p27910 Brassica napus HOM05D000138 ORTHO05D007692 2.6e-10 68.9 66 62.1
Thhalv10016812m.g Eutrema salsugineum HOM05D000138 ORTHO05D007692 2.6e-10 68.9 75 56.0
Aa31LG1G23730 Aethionema arabicum HOM05D000138 ORTHO05D007692 2.2e-09 65.9 74 56.8
THA.LOC104817716 Tarenaya hassleriana HOM05D000138 ORTHO05D007692 1.8e-08 62.8 69 53.6
Ciclev10005012m.g Citrus clementina HOM05D000138 ORTHO05D007692 1.6e-07 59.7 66 53.0
BcaC08g44771 Brassica carinata HOM05D002006 ORTHO05D002128 3.5e-07 58.5 43 65.1
C07p33560 Brassica napus HOM05D030553 ORTHO05D027181 5.9e-07 57.8 42 73.8
Cpa.g.sc224.4 Carica papaya HOM05D000138 ORTHO05D007692 5.9e-07 57.8 62 53.2
BcaC03g16810 Brassica carinata HOM05D030553 ORTHO05D027181 7.7e-07 57.4 42 71.4
C02p46830 Brassica napus HOM05D030553 ORTHO05D027181 7.7e-07 57.4 44 68.2
Duzib106G1979 Durio zibethinus HOM05D000138 ORTHO05D007692 7.7e-07 57.4 66 54.5
AT2G41710 Arabidopsis thaliana HOM05D000138 ORTHO05D007692 1.3e-06 56.6 83 48.2
BcaC03g17052 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-06 56.2 42 66.7
COL.COLO4_05666 Corchorus olitorius HOM05D000138 ORTHO05D007692 1.7e-06 56.2 66 53.0
Thecc.05G148300 Theobroma cacao HOM05D000138 ORTHO05D007692 1.7e-06 56.2 66 53.0
Duzib128G1290 Durio zibethinus HOM05D000138 ORTHO05D007692 2.3e-06 55.8 67 50.7
TAR633G1382 Trochodendron aralioides HOM05D000138 ORTHO05D007692 2.3e-06 55.8 66 53.0
CiPaw.10G034100 Carya illinoinensis HOM05D000138 ORTHO05D007692 2.9e-06 55.5 69 49.3
THA.LOC104824439 Tarenaya hassleriana HOM05D000138 ORTHO05D007692 2.9e-06 55.5 71 50.7
C06p23410 Brassica napus HOM05D030553 ORTHO05D027181 5.0e-06 54.7 44 65.9
TWI53G0031 Tripterygium wilfordii HOM05D000138 ORTHO05D007692 5.0e-06 54.7 62 51.6
MSTRG.7574 Avicennia marina HOM05D000138 ORTHO05D007692 8.6e-06 53.9 66 50.0


User provided reference genes

Program Settings