Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g16435 Brassica carinata HOM05D000084 ORTHO05D094833 3.6e-39 164.5 84 100.0
Sp6g07370 Schrenkiella parvula HOM05D000084 ORTHO05D000363 2.0e-29 132.1 82 81.7
Thhalv10028507m.g Eutrema salsugineum HOM05D000084 ORTHO05D000363 2.7e-26 121.7 82 78.0
Carub.0006s2856 Capsella rubella HOM05D000084 ORTHO05D000363 6.0e-26 120.6 81 75.3
AL6G43730 Arabidopsis lyrata HOM05D000084 ORTHO05D000363 3.0e-25 118.2 81 74.1
AT4G10010 Arabidopsis thaliana HOM05D000084 ORTHO05D000363 6.2e-23 110.5 83 73.5
BcaB05g23927 Brassica carinata HOM05D000084 ORTHO05D000363 6.8e-22 107.1 82 73.2
CARHR260970 Cardamine hirsuta HOM05D000084 ORTHO05D000363 2.0e-21 105.5 82 68.3
BolC2t10296H Brassica oleracea HOM05D000084 ORTHO05D000363 2.9e-20 101.7 87 69.0
Aa31LG9G11980 Aethionema arabicum HOM05D000084 ORTHO05D000363 4.9e-20 100.9 81 70.4
THA.LOC104815877 Tarenaya hassleriana HOM05D000084 ORTHO05D000363 3.1e-14 81.6 81 56.8
TWI75G0455 Tripterygium wilfordii HOM05D000084 ORTHO05D000363 1.5e-13 79.3 81 54.3
A09p28880 Brassica napus HOM05D000084 ORTHO05D000363 2.6e-13 78.6 82 54.9
BraA09t38449Z Brassica rapa HOM05D000084 ORTHO05D000363 2.6e-13 78.6 82 54.9
Cpa.g.sc21.61 Carica papaya HOM05D000084 ORTHO05D000363 2.2e-12 75.5 80 50.0
BcaC04g21007 Brassica carinata HOM05D000084 ORTHO05D000363 4.9e-12 74.3 82 52.4
C09p36710 Brassica napus HOM05D000084 ORTHO05D000363 4.9e-12 74.3 82 52.4
BolC9t56502H Brassica oleracea HOM05D000084 ORTHO05D000363 4.9e-12 74.3 82 52.4
BcaB01g01442 Brassica carinata HOM05D000084 ORTHO05D000363 1.1e-11 73.2 82 52.4
Thecc.08G173900 Theobroma cacao HOM05D000084 ORTHO05D000363 5.4e-11 70.9 80 51.2
Duzib268G0256 Durio zibethinus HOM05D000084 ORTHO05D000363 7.1e-11 70.5 80 55.0
Ciclev10023974m.g Citrus clementina HOM05D000084 ORTHO05D000363 1.3e-09 66.2 80 50.0
COL.COLO4_24593 Corchorus olitorius HOM05D000084 ORTHO05D000363 2.3e-09 65.5 81 49.4
Potri.013G100100 Populus trichocarpa HOM05D000084 ORTHO05D000363 5.1e-09 64.3 80 47.5
Eucgr.F02965 Eucalyptus grandis HOM05D000084 ORTHO05D000363 8.7e-09 63.5 88 47.7
CiPaw.03G016800 Carya illinoinensis HOM05D000084 ORTHO05D000363 3.3e-08 61.6 79 45.6
Aa31LG6G8100 Aethionema arabicum HOM05D000084 ORTHO05D000363 7.3e-08 60.5 82 46.3
PGR042G3995 Punica granatum HOM05D000084 ORTHO05D000363 1.2e-07 59.7 86 46.5
Prupe.1G546300 Prunus persica HOM05D000084 ORTHO05D000363 1.6e-07 59.3 87 46.0
QL09p002936 Quercus lobata HOM05D000084 ORTHO05D000363 2.1e-07 58.9 87 42.5
QL09p004004 Quercus lobata HOM05D000084 ORTHO05D000363 2.1e-07 58.9 87 42.5
Sp1g29110 Schrenkiella parvula HOM05D000084 ORTHO05D000363 2.1e-07 58.9 82 46.3
CARHR291160 Cardamine hirsuta HOM05D000084 ORTHO05D000363 4.7e-07 57.8 83 45.8
Atru.chr13.2426 Acer truncatum HOM05D000084 ORTHO05D000363 6.2e-07 57.4 81 44.4
Sabra13G0085800 Salix brachista HOM05D000084 ORTHO05D000363 8.1e-07 57.0 80 45.0
BcaB03g13689 Brassica carinata HOM05D000084 ORTHO05D000363 1.1e-06 56.6 82 45.1
Aa31LG7G6800 Aethionema arabicum HOM05D000084 ORTHO05D000363 1.4e-06 56.2 83 45.8
Dinv18883 Davidia involucrata HOM05D000084 ORTHO05D000363 1.4e-06 56.2 86 44.2
Aa31LG4G9070 Aethionema arabicum HOM05D000084 ORTHO05D000363 3.1e-06 55.1 78 43.6
BraA07t31342Z Brassica rapa HOM05D000084 ORTHO05D000363 3.1e-06 55.1 82 40.2
Carub.0002s1838 Capsella rubella HOM05D000084 ORTHO05D000363 3.1e-06 55.1 83 43.4
Dinv09405 Davidia involucrata HOM05D000084 ORTHO05D000363 3.1e-06 55.1 86 44.2
Potri.019G073100 Populus trichocarpa HOM05D000084 ORTHO05D000363 3.1e-06 55.1 80 42.5
BcaB05g24661 Brassica carinata HOM05D000084 ORTHO05D000363 4.0e-06 54.7 83 44.6
AL2G31180 Arabidopsis lyrata HOM05D000084 ORTHO05D000363 5.2e-06 54.3 82 40.2
BcaC08g46587 Brassica carinata HOM05D000084 ORTHO05D000363 6.9e-06 53.9 82 39.0
CARHR033170 Cardamine hirsuta HOM05D000084 ORTHO05D000363 9.0e-06 53.5 82 42.7
Sp5g26660 Schrenkiella parvula HOM05D000084 ORTHO05D000363 9.0e-06 53.5 82 43.9


User provided reference genes

Program Settings