Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g16152 Brassica carinata HOM05D011499 ORTHO05D011963 1.1e-53 213.0 104 100.0
BcaC03g14231 Brassica carinata HOM05D011499 ORTHO05D011963 3.9e-51 204.5 104 96.2
BcaB01g02453 Brassica carinata HOM05D011499 ORTHO05D011963 5.6e-42 174.1 104 83.7
BcaC08g43898 Brassica carinata HOM05D011499 ORTHO05D011963 5.6e-42 174.1 111 79.3
BcaB02g07232 Brassica carinata HOM05D011499 ORTHO05D011963 2.9e-38 161.8 104 80.8
BcaC04g22205 Brassica carinata HOM05D011499 ORTHO05D011963 1.1e-37 159.8 104 79.8
BcaB05g23057 Brassica carinata HOM05D011499 ORTHO05D011963 4.2e-37 157.9 104 78.8
BcaC09g49356 Brassica carinata HOM05D011499 ORTHO05D011963 8.7e-35 150.2 104 76.0
BcaB04g17658 Brassica carinata HOM05D011499 ORTHO05D011963 7.4e-34 147.1 112 70.5
BcaC08g45874 Brassica carinata HOM05D011499 ORTHO05D011963 1.9e-26 122.5 111 63.1
BcaB07g33626 Brassica carinata HOM05D011499 ORTHO05D011963 3.1e-24 115.2 110 57.3
BcaNung00856 Brassica carinata HOM05D011499 ORTHO05D011963 2.4e-16 89.0 118 46.6
Thhalv10002194m.g Eutrema salsugineum HOM05D006735 ORTHO05D011963 3.8e-14 81.6 89 47.2
BcaC07g38983 Brassica carinata HOM05D011499 ORTHO05D011963 2.3e-11 72.4 41 85.4
BcaB02g10963 Brassica carinata HOM05D006735 ORTHO05D011963 3.1e-08 62.0 102 36.3
BcaB04g18785 Brassica carinata HOM05D006735 ORTHO05D011963 3.1e-08 62.0 102 35.3
BcaC09g51566 Brassica carinata HOM05D006735 ORTHO05D009558 1.5e-07 59.7 54 40.7
C04p61000 Brassica napus HOM05D006735 ORTHO05D009558 1.5e-07 59.7 54 40.7
Carub.0003s1967 Capsella rubella HOM05D006735 ORTHO05D009558 1.5e-07 59.7 63 41.3
BcaC04g20691 Brassica carinata HOM05D006735 ORTHO05D009558 2.0e-07 59.3 54 40.7
C09p40570 Brassica napus HOM05D006735 ORTHO05D009558 2.0e-07 59.3 54 40.7
A09p42550 Brassica napus HOM05D006735 ORTHO05D009558 3.4e-07 58.5 54 38.9
C03p17760 Brassica napus HOM05D006735 ORTHO05D009558 3.4e-07 58.5 98 32.7
AT2G20625 Arabidopsis thaliana HOM05D006735 ORTHO05D011963 4.5e-07 58.2 55 50.9
A07p02010 Brassica napus HOM05D006735 ORTHO05D009558 5.9e-07 57.8 98 32.7
C09p53130 Brassica napus HOM05D006735 ORTHO05D009558 5.9e-07 57.8 98 32.7
BcaB02g10644 Brassica carinata HOM05D006735 ORTHO05D011963 7.7e-07 57.4 102 34.3
C03p60980 Brassica napus HOM05D006735 ORTHO05D009558 1.0e-06 57.0 98 31.6
C08p49000 Brassica napus HOM05D006735 ORTHO05D009558 1.0e-06 57.0 102 30.4
BolC9t58189H Brassica oleracea HOM05D006735 ORTHO05D009558 1.3e-06 56.6 94 33.0
BcaC03g15864 Brassica carinata HOM05D006735 ORTHO05D009558 2.2e-06 55.8 54 40.7
BcaC07g38146 Brassica carinata HOM05D006735 ORTHO05D009558 2.2e-06 55.8 54 40.7
BcaC08g45821 Brassica carinata HOM05D006735 ORTHO05D009558 2.2e-06 55.8 54 40.7
A08p25190 Brassica napus HOM05D006735 ORTHO05D009558 2.2e-06 55.8 54 40.7
C01p49010 Brassica napus HOM05D006735 ORTHO05D000586 2.2e-06 55.8 54 40.7
C07p37620 Brassica napus HOM05D006735 ORTHO05D010262 2.2e-06 55.8 105 35.2
C09p22370 Brassica napus HOM05D006735 ORTHO05D009558 2.2e-06 55.8 54 40.7
C09p55340 Brassica napus HOM05D006735 ORTHO05D009558 2.2e-06 55.8 105 35.2
C04p69030 Brassica napus HOM05D006735 ORTHO05D009558 3.8e-06 55.1 54 40.7
BraA06t25399Z Brassica rapa HOM05D006735 ORTHO05D009558 3.8e-06 55.1 110 33.6
BcaC09g48693 Brassica carinata HOM05D006735 ORTHO05D009558 5.0e-06 54.7 99 33.3
A01p26730 Brassica napus HOM05D006735 ORTHO05D009558 5.0e-06 54.7 50 42.0
A10p02300 Brassica napus HOM05D006735 ORTHO05D009558 5.0e-06 54.7 93 30.1
C01p27580 Brassica napus HOM05D006735 ORTHO05D009558 6.5e-06 54.3 90 31.1
C02p38090 Brassica napus HOM05D006735 ORTHO05D009558 6.5e-06 54.3 90 31.1
C03p71260 Brassica napus HOM05D006735 ORTHO05D009558 6.5e-06 54.3 90 31.1
BolC8t47857H Brassica oleracea HOM05D006735 ORTHO05D009558 6.5e-06 54.3 115 35.7
BcaC09g51945 Brassica carinata HOM05D006735 ORTHO05D009558 8.5e-06 53.9 54 40.7
C03p85420 Brassica napus HOM05D006735 ORTHO05D009558 8.5e-06 53.9 54 40.7


User provided reference genes

Program Settings