Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 1.7e-82 309.3 161 100.0
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 2.3e-50 202.6 104 97.1
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 5.1e-50 201.4 140 82.9
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 3.7e-48 195.3 140 79.3
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 8.1e-48 194.1 140 80.0
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 8.1e-48 194.1 140 80.0
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 8.1e-48 194.1 140 79.3
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 1.1e-47 193.7 140 79.3
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 1.4e-47 193.4 140 79.3
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 1.4e-47 193.4 140 79.3
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.4e-47 193.4 140 79.3
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 4.0e-47 191.8 140 78.6
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 9.9e-46 187.2 140 77.1
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 5.6e-41 171.4 146 69.9
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 1.6e-40 169.9 140 69.3
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 4.8e-40 168.3 140 66.4
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 4.8e-40 168.3 140 67.1
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 1.4e-39 166.8 115 81.7
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 1.8e-39 166.4 140 67.1
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 2.4e-39 166.0 115 80.9
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 1.2e-38 163.7 140 65.0
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.2e-38 163.7 140 65.7
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 4.5e-38 161.8 140 63.6
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 4.5e-38 161.8 140 63.6
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 4.5e-38 161.8 140 63.6
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 5.8e-38 161.4 140 64.3
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 5.8e-38 161.4 140 65.7
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 7.6e-38 161.0 140 64.3
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 1.0e-37 160.6 140 64.3
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 1.7e-37 159.8 140 63.6
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 2.2e-37 159.5 140 63.6
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 3.8e-37 158.7 140 62.9
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 3.8e-37 158.7 140 63.6
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 4.9e-37 158.3 140 63.6
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 4.9e-37 158.3 140 62.9
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 4.9e-37 158.3 140 63.6
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 4.9e-37 158.3 140 62.9
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 4.9e-37 158.3 140 63.6
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 6.5e-37 157.9 140 62.1
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 6.5e-37 157.9 140 63.6
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 6.5e-37 157.9 140 62.9
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 8.4e-37 157.5 140 62.9
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 1.1e-36 157.1 140 62.1
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 1.1e-36 157.1 140 62.1
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 1.9e-36 156.4 140 63.6
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.9e-36 156.4 140 63.6
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 1.9e-36 156.4 140 64.3
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 1.9e-36 156.4 140 62.1
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 2.5e-36 156.0 139 61.9
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 2.5e-36 156.0 140 62.1
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 3.2e-36 155.6 155 59.4
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 4.2e-36 155.2 140 63.6
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 5.5e-36 154.8 140 61.4
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 5.5e-36 154.8 140 60.7
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 5.5e-36 154.8 140 64.3
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 9.3e-36 154.1 140 59.3
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 9.3e-36 154.1 140 62.1
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 1.2e-35 153.7 140 62.1
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 1.2e-35 153.7 164 57.3
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 1.6e-35 153.3 140 62.1
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 1.6e-35 153.3 140 60.0
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 1.6e-35 153.3 140 60.0
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 2.1e-35 152.9 140 60.7
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 2.7e-35 152.5 139 61.9
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 2.7e-35 152.5 140 58.6
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 3.5e-35 152.1 140 61.4
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 3.5e-35 152.1 140 61.4
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 4.6e-35 151.8 140 60.7
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 4.6e-35 151.8 140 58.6
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 6.0e-35 151.4 140 60.0
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 6.0e-35 151.4 140 58.6
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 6.0e-35 151.4 140 58.6
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 6.0e-35 151.4 140 60.0
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 6.0e-35 151.4 140 60.0
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.0e-34 150.6 140 62.1
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 1.3e-34 150.2 140 60.7
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 1.3e-34 150.2 140 60.0
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 1.8e-34 149.8 140 60.0
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 1.8e-34 149.8 140 59.3
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.8e-34 149.8 140 60.0
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 2.3e-34 149.4 140 59.3
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 2.3e-34 149.4 140 59.3
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 3.0e-34 149.1 140 59.3
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 3.0e-34 149.1 140 62.1
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 3.0e-34 149.1 139 59.0
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 6.7e-34 147.9 140 60.7
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 8.7e-34 147.5 140 58.6
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 2.5e-33 146.0 140 60.7
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 4.3e-33 145.2 140 60.0
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 1.6e-32 143.3 140 57.1
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 2.2e-32 142.9 140 59.3
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 3.7e-32 142.1 140 59.3
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 4.8e-32 141.7 140 55.7
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 1.1e-31 140.6 140 57.1
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.4e-31 140.2 140 59.3
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.4e-31 140.2 140 56.4
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 2.4e-31 139.4 158 53.2
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.4e-31 139.4 140 59.3
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 2.4e-31 139.4 138 56.5
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 5.3e-31 138.3 140 58.6
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.3e-31 138.3 140 58.6
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.3e-31 138.3 140 58.6
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 2.0e-30 136.3 140 60.0
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 5.9e-30 134.8 140 55.0
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.7e-29 133.3 140 54.3
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 2.2e-29 132.9 157 51.0
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 4.2e-28 128.6 133 55.6
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 1.6e-27 126.7 139 54.0
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 6.7e-26 121.3 194 43.8
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 1.7e-24 116.7 104 63.5
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 2.6e-22 109.4 140 47.9
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 3.8e-21 105.5 100 58.0
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.9e-20 103.2 140 45.0
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 6.1e-19 98.2 74 66.2
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.1e-17 94.0 103 51.5
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.3e-17 92.4 139 41.0
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 9.7e-17 90.9 140 41.4
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 3.7e-16 89.0 139 41.7
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 6.3e-16 88.2 109 46.8
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 8.2e-16 87.8 76 59.2
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 4.5e-14 82.0 103 49.5
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 5.2e-10 68.6 111 38.7
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 2.0e-09 66.6 106 37.7


User provided reference genes

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