Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g16052 Brassica carinata HOM05D003847 ORTHO05D004976 4.6e-21 103.6 51 100.0
BcaB01g02281 Brassica carinata HOM05D003847 ORTHO05D004976 6.6e-12 73.2 41 85.4
A09p00040 Brassica napus HOM05D003847 ORTHO05D004976 6.6e-12 73.2 41 85.4
BolC9t53000H Brassica oleracea HOM05D003847 ORTHO05D004976 6.6e-12 73.2 41 85.4
BraA09t35735Z Brassica rapa HOM05D003847 ORTHO05D004976 6.6e-12 73.2 41 85.4
AL6G52080 Arabidopsis lyrata HOM05D003847 ORTHO05D004976 8.7e-12 72.8 38 92.1
AT4G01320 Arabidopsis thaliana HOM05D003847 ORTHO05D004976 8.7e-12 72.8 38 92.1
BcaB01g02153 Brassica carinata HOM05D003847 ORTHO05D004976 8.7e-12 72.8 38 92.1
BcaC01g06856 Brassica carinata HOM05D003847 ORTHO05D004976 8.7e-12 72.8 38 92.1
C03p39000 Brassica napus HOM05D003847 ORTHO05D004976 8.7e-12 72.8 38 92.1
BolC3t16172H Brassica oleracea HOM05D003847 ORTHO05D004976 8.7e-12 72.8 38 92.1
BraA03t12370Z Brassica rapa HOM05D003847 ORTHO05D004976 8.7e-12 72.8 38 92.1
Carub.0006s3638 Capsella rubella HOM05D003847 ORTHO05D004976 8.7e-12 72.8 38 92.1
CARHR249000 Cardamine hirsuta HOM05D003847 ORTHO05D004976 8.7e-12 72.8 38 92.1
Thhalv10028603m.g Eutrema salsugineum HOM05D003847 ORTHO05D004976 8.7e-12 72.8 38 92.1
BcaC04g24142 Brassica carinata HOM05D003847 ORTHO05D004976 1.5e-11 72.0 41 85.4
C09p00660 Brassica napus HOM05D003847 ORTHO05D004976 1.5e-11 72.0 41 85.4
Aa31LG5G720 Aethionema arabicum HOM05D003847 ORTHO05D004976 1.9e-11 71.6 38 92.1
Sp6g00820 Schrenkiella parvula HOM05D003847 ORTHO05D004976 1.9e-11 71.6 38 92.1
A03p31980 Brassica napus HOM05D003847 ORTHO05D004976 2.5e-11 71.2 38 89.5
Lj9C587T13 Lonicera japonica HOM05D003847 ORTHO05D004976 4.3e-11 70.5 38 89.5
Hund16669 Selenicereus undatus HOM05D003847 ORTHO05D004976 9.6e-11 69.3 38 86.8
TAR375G0471 Trochodendron aralioides HOM05D003847 ORTHO05D004976 9.6e-11 69.3 38 81.6
Aqoxy5G04080 Aquilegia oxysepala HOM05D003847 ORTHO05D004976 1.3e-10 68.9 38 84.2
arahy.Tifrunner.gnm1.ann1.9YV9D4 Arachis hypogaea HOM05D003847 ORTHO05D004976 1.3e-10 68.9 38 86.8
ClCG05G001330 Citrullus lanatus HOM05D003847 ORTHO05D004976 1.3e-10 68.9 38 84.2
Ciclev10020054m.g Citrus clementina HOM05D003847 ORTHO05D004976 1.3e-10 68.9 38 84.2
MELO3C006089.2 Cucumis melo HOM05D003847 ORTHO05D004976 1.3e-10 68.9 38 84.2
MD01G1069400 Malus domestica HOM05D003847 ORTHO05D004976 1.3e-10 68.9 38 84.2
Potri.014G088900 Populus trichocarpa HOM05D003847 ORTHO05D004976 1.3e-10 68.9 38 84.2
Prupe.2G175500 Prunus persica HOM05D003847 ORTHO05D004976 1.3e-10 68.9 38 84.2
GSVIVG01026981001 Vitis vinifera HOM05D003847 ORTHO05D004976 1.3e-10 68.9 38 81.6
CiPaw.01G065300 Carya illinoinensis HOM05D003847 ORTHO05D004976 1.6e-10 68.6 38 81.6
Ca_00820_v3 Cicer arietinum L. HOM05D003847 ORTHO05D004976 1.6e-10 68.6 38 84.2
Gohir.A11G091500 Gossypium hirsutum HOM05D003847 ORTHO05D004976 1.6e-10 68.6 38 86.8
Gohir.D11G096200 Gossypium hirsutum HOM05D003847 ORTHO05D004976 1.6e-10 68.6 38 86.8
Gorai.007G102500 Gossypium raimondii HOM05D003847 ORTHO05D004976 1.6e-10 68.6 38 86.8
Psat3g106680 Pisum sativum HOM05D003847 ORTHO05D004976 1.6e-10 68.6 38 84.2
SGA_v2.0_scaffold43G16402 Striga asiatica HOM05D003847 ORTHO05D004976 1.6e-10 68.6 38 86.8
Dinv43851 Davidia involucrata HOM05D003847 ORTHO05D004976 2.8e-10 67.8 38 84.2
Lj1g0024026 Lotus japonicus HOM05D003847 ORTHO05D004976 2.8e-10 67.8 38 84.2
Lalb_Chr04g0259201 Lupinus albus HOM05D003847 ORTHO05D004976 2.8e-10 67.8 38 84.2
Phvul.008G059300 Phaseolus vulgaris HOM05D003847 ORTHO05D004976 2.8e-10 67.8 38 84.2
HPP92_022235 Vanilla planifolia HOM05D003847 ORTHO05D004976 2.8e-10 67.8 38 78.9
AagrBONN_evm.TU.Sc2ySwM_344.5530 Anthoceros agrestis HOM05D003847 ORTHO05D004976 3.6e-10 67.4 38 84.2
arahy.Tifrunner.gnm1.ann1.P1PLPP Arachis hypogaea HOM05D003847 ORTHO05D004976 3.6e-10 67.4 38 84.2
arahy.Tifrunner.gnm1.ann1.U13Q33 Arachis hypogaea HOM05D003847 ORTHO05D004976 3.6e-10 67.4 38 84.2
arahy.Tifrunner.gnm1.ann1.W45FS6 Arachis hypogaea HOM05D003847 ORTHO05D004976 3.6e-10 67.4 38 84.2
CSS0029735 Camellia sinensis var. sinensis HOM05D003847 ORTHO05D004976 3.6e-10 67.4 38 84.2
CDE09G0314 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 3.6e-10 67.4 38 81.6
CDE11G0931 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 3.6e-10 67.4 38 81.6
Cc02_g38410 Coffea canephora HOM05D003847 ORTHO05D004976 3.6e-10 67.4 38 81.6
CsaV3_3G008710 Cucumis sativus L. HOM05D003847 ORTHO05D004976 3.6e-10 67.4 38 81.6
DCAR_008629 Daucus carota HOM05D003847 ORTHO05D004976 3.6e-10 67.4 38 81.6
PGR042G1058 Punica granatum HOM05D003847 ORTHO05D004976 3.6e-10 67.4 38 78.9
Sabra14G0064600 Salix brachista HOM05D003847 ORTHO05D004976 3.6e-10 67.4 38 81.6
Cfa003885 Carpinus fangiana HOM05D003847 ORTHO05D004976 4.8e-10 67.0 38 81.6
Migut.N01455 Erythranthe guttata HOM05D003847 ORTHO05D004976 4.8e-10 67.0 38 84.2
Mapoly0151s0045 Marchantia polymorpha HOM05D003847 ORTHO05D004976 4.8e-10 67.0 38 84.2
Nn1g01640 Nelumbo nucifera HOM05D003847 ORTHO05D004976 4.8e-10 67.0 38 81.6
Nitab4.5_0003779g0180 Nicotiana tabacum HOM05D003847 ORTHO05D004976 4.8e-10 67.0 38 78.9
RcHm_v2.0_Chr1g0357201 Rosa chinensis HOM05D003847 ORTHO05D004976 4.8e-10 67.0 38 84.2
RcHm_v2.0_Chr1g0357211 Rosa chinensis HOM05D003847 ORTHO05D004976 4.8e-10 67.0 38 81.6
Sed0007018 Sechium edule HOM05D003847 ORTHO05D004976 4.8e-10 67.0 38 81.6
Sc26g0000820 Simmondsia chinensis HOM05D003847 ORTHO05D004976 4.8e-10 67.0 38 81.6
THA.LOC104817033 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 4.8e-10 67.0 38 81.6
THA.LOC104825858 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 4.8e-10 67.0 38 81.6
Thecc.01G354200 Theobroma cacao HOM05D003847 ORTHO05D004976 4.8e-10 67.0 38 84.2
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 4.8e-10 67.0 38 81.6
AUR62004399 Chenopodium quinoa HOM05D003847 ORTHO05D004976 6.2e-10 66.6 38 81.6
AUR62022605 Chenopodium quinoa HOM05D003847 ORTHO05D004976 6.2e-10 66.6 38 81.6
Glyma.09G255600 Glycine max HOM05D003847 ORTHO05D004976 6.2e-10 66.6 38 81.6
Glyma.18G237300 Glycine max HOM05D003847 ORTHO05D004976 6.2e-10 66.6 38 81.6
Medtr7g078760 Medicago truncatula HOM05D003847 ORTHO05D004976 6.2e-10 66.6 38 81.6
Oeu036597.2 Olea europaea HOM05D003847 ORTHO05D004976 6.2e-10 66.6 38 81.6
Potri.002G162700 Populus trichocarpa HOM05D003847 ORTHO05D004976 6.2e-10 66.6 38 81.6
SalBow5G2471 Salvia bowleyana HOM05D003847 ORTHO05D004976 6.2e-10 66.6 38 81.6
TPR.G22298 Trifolium pratense HOM05D003847 ORTHO05D004976 6.2e-10 66.6 38 81.6
VMungo1383G0817 Vigna mungo HOM05D003847 ORTHO05D004976 6.2e-10 66.6 38 81.6
CANSAT56G2934 Cannabis sativa HOM05D003847 ORTHO05D004976 8.1e-10 66.2 38 78.9
COL.COLO4_12761 Corchorus olitorius HOM05D003847 ORTHO05D004976 8.1e-10 66.2 38 81.6
FvH4_7g15081 Fragaria vesca HOM05D003847 ORTHO05D004976 8.1e-10 66.2 38 81.6
FAN01G0997 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.1e-10 66.2 38 81.6
FAN03G0710 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.1e-10 66.2 38 81.6
FAN03G1748 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.1e-10 66.2 38 81.6
FAN06G3510 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.1e-10 66.2 38 81.6
FAN10G0014 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.1e-10 66.2 38 81.6
FAN10G1372 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.1e-10 66.2 38 81.6
FAN10G2219 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.1e-10 66.2 38 81.6
HanXRQChr17g0562361 Helianthus annuus HOM05D003847 ORTHO05D004976 8.1e-10 66.2 38 84.2
Nitab4.5_0001702g0130 Nicotiana tabacum HOM05D003847 ORTHO05D004976 8.1e-10 66.2 38 78.9
Oeu015226.2 Olea europaea HOM05D003847 ORTHO05D004976 8.1e-10 66.2 38 81.6
TWI59G0695 Tripterygium wilfordii HOM05D003847 ORTHO05D004976 8.1e-10 66.2 38 78.9
Duzib138G0396 Durio zibethinus HOM05D003847 ORTHO05D004976 1.1e-09 65.9 38 81.6
FvH4_7g15083 Fragaria vesca HOM05D003847 ORTHO05D004976 1.1e-09 65.9 38 81.6
FAN06G4922 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.1e-09 65.9 38 81.6
Lsat_1_v5_gn_4_34641 Lactuca sativa HOM05D003847 ORTHO05D004976 1.1e-09 65.9 38 84.2
Manes.05G031000 Manihot esculenta HOM05D003847 ORTHO05D004976 1.1e-09 65.9 38 81.6
Solyc01g094930.3 Solanum lycopersicum HOM05D003847 ORTHO05D004976 1.1e-09 65.9 38 84.2
Sopen01g038710 Solanum pennellii HOM05D003847 ORTHO05D004976 1.1e-09 65.9 38 84.2
TAR629G0433 Trochodendron aralioides HOM05D003847 ORTHO05D004976 1.1e-09 65.9 38 78.9
Actinidia02826 Actinidia chinensis HOM05D003847 ORTHO05D004976 1.4e-09 65.5 38 78.9
MSTRG.28227 Avicennia marina HOM05D003847 ORTHO05D004976 1.4e-09 65.5 38 78.9
EL10Ac1g00369 Beta vulgaris HOM05D003847 ORTHO05D004976 1.4e-09 65.5 38 78.9
DCAR_025211 Daucus carota HOM05D003847 ORTHO05D004976 1.4e-09 65.5 38 81.6
Hma1.2p1_0627F.1_g191710 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 1.4e-09 65.5 38 81.6
PSO478G2530 Papaver somniferum HOM05D003847 ORTHO05D004976 1.4e-09 65.5 38 78.9
Atru.chr5.547 Acer truncatum HOM05D003847 ORTHO05D004976 1.8e-09 65.1 38 78.9
Zm00001eb187240 Zea mays HOM05D003847 ORTHO05D004976 1.8e-09 65.1 38 78.9
Haze_15549 Corylus avellana HOM05D003847 ORTHO05D004976 2.4e-09 64.7 38 78.9
ECA234G3268 Erigeron canadensis HOM05D003847 ORTHO05D004976 2.4e-09 64.7 38 81.6
QL04p055042 Quercus lobata HOM05D003847 ORTHO05D004976 2.4e-09 64.7 38 78.9
Sed0024082 Sechium edule HOM05D003847 ORTHO05D004976 2.4e-09 64.7 38 81.6
Duzib133G1387 Durio zibethinus HOM05D003847 ORTHO05D004976 3.1e-09 64.3 38 78.9
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 3.1e-09 64.3 38 78.9
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.1e-09 64.3 38 78.9
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.1e-09 64.3 38 78.9
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.1e-09 64.3 38 78.9
MBI04_g26959_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D004976 3.1e-09 64.3 38 76.3
Sabra02G0147800 Salix brachista HOM05D003847 ORTHO05D004976 3.1e-09 64.3 38 78.9
Sabra02G0148200 Salix brachista HOM05D003847 ORTHO05D004976 3.1e-09 64.3 38 78.9
SEGI_36957 Sequoiadendron giganteum HOM05D003847 ORTHO05D004976 3.1e-09 64.3 38 78.9
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 4.0e-09 63.9 38 78.9
Nitab4.5_0001269g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 4.0e-09 63.9 38 81.6
PSO782G0912 Papaver somniferum HOM05D003847 ORTHO05D004976 5.3e-09 63.5 38 76.3
MSTRG.4846 Avicennia marina HOM05D003847 ORTHO05D004976 6.9e-09 63.2 38 78.9
FAN10G3576 Fragaria x ananassa HOM05D003847 ORTHO05D004976 6.9e-09 63.2 38 78.9
Os02g0680400 Oryza sativa ssp. japonica HOM05D003847 ORTHO05D004976 6.9e-09 63.2 38 76.3
Pp3c4_3300 Physcomitrium patens HOM05D003847 ORTHO05D004976 6.9e-09 63.2 38 78.9
CAN.G78.110 Capsicum annuum HOM05D003847 ORTHO05D004976 9.0e-09 62.8 38 81.6
CBR_g23782 Chara braunii HOM05D003847 ORTHO05D004976 9.0e-09 62.8 38 76.3
Eucgr.D02317 Eucalyptus grandis HOM05D003847 ORTHO05D004976 9.0e-09 62.8 38 73.7
RcHm_v2.0_Chr1g0357271 Rosa chinensis HOM05D003847 ORTHO05D004976 9.0e-09 62.8 38 76.3
vmacro20904 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 9.0e-09 62.8 38 76.3
Pp3c12_25070 Physcomitrium patens HOM05D003847 ORTHO05D004976 3.4e-08 60.8 38 76.3
ATR0661G289 Amborella trichopoda HOM05D003847 ORTHO05D004976 4.4e-08 60.5 38 73.7
HanXRQChr16g0521851 Helianthus annuus HOM05D003847 ORTHO05D004976 5.8e-08 60.1 38 73.7
FAN01G2116 Fragaria x ananassa HOM05D003847 ORTHO05D004976 7.6e-08 59.7 36 75.0
vmacro04325 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 1.3e-07 58.9 38 73.7
Atru.chr5.1381 Acer truncatum HOM05D003847 ORTHO05D004976 1.7e-07 58.5 44 68.2
SalBow5G1235 Salvia bowleyana HOM05D003847 ORTHO05D004976 2.2e-07 58.2 34 79.4
SMO364G0773 Selaginella moellendorffii HOM05D003847 ORTHO05D004976 4.9e-07 57.0 38 65.8
Psat2g071920 Pisum sativum HOM05D003847 ORTHO05D004976 8.4e-07 56.2 38 68.4
Cre07.g356150 Chlamydomonas reinhardtii HOM05D003847 ORTHO05D004976 1.9e-06 55.1 38 65.8
QL12p031965 Quercus lobata HOM05D003847 ORTHO05D004976 1.9e-06 55.1 37 67.6
CANSAT25G3593 Cannabis sativa HOM05D003847 ORTHO05D004976 2.4e-06 54.7 38 71.1
HanXRQChr16g0521861 Helianthus annuus HOM05D003847 ORTHO05D004976 3.2e-06 54.3 37 67.6
Nitab4.5_0011900g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 5.4e-06 53.5 63 52.4
vmacro05290 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 7.1e-06 53.1 38 65.8


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