Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g15907 Brassica carinata HOM05D004416 ORTHO05D005439 1.0e-99 366.7 179 100.0
BcaC03g16936 Brassica carinata HOM05D004416 ORTHO05D005439 1.9e-90 335.9 177 91.0
BcaC01g01957 Brassica carinata HOM05D004416 ORTHO05D005439 6.4e-86 320.9 177 90.4
BcaC02g10699 Brassica carinata HOM05D004416 ORTHO05D005439 8.4e-86 320.5 177 89.8
BcaB01g01401 Brassica carinata HOM05D004416 ORTHO05D005439 6.6e-83 310.8 181 85.1
BcaB02g11426 Brassica carinata HOM05D004416 ORTHO05D005439 6.6e-83 310.8 183 83.1
BcaB08g35163 Brassica carinata HOM05D004416 ORTHO05D005439 5.6e-82 307.8 180 83.9
BcaB08g35336 Brassica carinata HOM05D004416 ORTHO05D005439 9.6e-82 307.0 176 85.8
BcaB07g33926 Brassica carinata HOM05D004416 ORTHO05D005439 6.9e-80 300.8 180 83.9
C04p26840 Brassica napus HOM05D004416 ORTHO05D005439 7.1e-77 290.8 168 85.7
C07p14120 Brassica napus HOM05D004416 ORTHO05D005439 1.0e-75 287.0 192 77.6
BolC7t41909H Brassica oleracea HOM05D004416 ORTHO05D005439 3.0e-75 285.4 192 77.1
BolC3t19272H Brassica oleracea HOM05D004416 ORTHO05D005439 1.3e-73 280.0 168 83.9
C08p05960 Brassica napus HOM05D004416 ORTHO05D005439 3.6e-73 278.5 168 82.7
BolC4t24120H Brassica oleracea HOM05D004416 ORTHO05D005439 1.4e-72 276.6 161 85.7
A02p29090 Brassica napus HOM05D004416 ORTHO05D005439 5.8e-71 271.2 161 83.9
BraA02t07941Z Brassica rapa HOM05D004416 ORTHO05D005439 1.4e-69 266.5 161 82.0
BcaB07g32576 Brassica carinata HOM05D004416 ORTHO05D005439 5.1e-67 258.1 168 76.2
BolC8t47412H Brassica oleracea HOM05D004416 ORTHO05D005439 7.6e-63 244.2 124 92.7
BcaB08g35472 Brassica carinata HOM05D004416 ORTHO05D005439 9.3e-61 237.3 152 79.6
BcaB03g16134 Brassica carinata HOM05D004416 ORTHO05D005439 6.7e-59 231.1 153 76.5
C04p45740 Brassica napus HOM05D004416 ORTHO05D005439 5.7e-58 228.0 153 76.5
C05p37470 Brassica napus HOM05D004416 ORTHO05D005439 1.6e-57 226.5 168 71.4
BolC9t58507H Brassica oleracea HOM05D004416 ORTHO05D005439 2.1e-57 226.1 154 75.3
C07p03030 Brassica napus HOM05D004416 ORTHO05D005439 2.8e-57 225.7 168 64.3
BolC5t32488H Brassica oleracea HOM05D004416 ORTHO05D005439 3.7e-57 225.3 168 70.2
BolC7t40697H Brassica oleracea HOM05D004416 ORTHO05D005439 3.7e-57 225.3 168 64.9
BcaC07g37518 Brassica carinata HOM05D004416 ORTHO05D005439 8.2e-57 224.2 168 64.9
BolC2t08689H Brassica oleracea HOM05D004416 ORTHO05D005439 1.1e-56 223.8 137 82.5
BolC8t47841H Brassica oleracea HOM05D004416 ORTHO05D005439 1.1e-56 223.8 168 64.9
C02p26230 Brassica napus HOM05D004416 ORTHO05D005439 1.4e-56 223.4 137 81.0
BraA09t39013Z Brassica rapa HOM05D004416 ORTHO05D005439 1.4e-56 223.4 166 65.1
A09p34830 Brassica napus HOM05D004416 ORTHO05D005439 3.1e-56 222.2 168 64.3
BcaC06g36549 Brassica carinata HOM05D004416 ORTHO05D005439 4.0e-56 221.9 168 64.3
C02p39710 Brassica napus HOM05D004416 ORTHO05D005439 5.8e-55 218.0 148 76.4
BcaB07g33300 Brassica carinata HOM05D004416 ORTHO05D005439 9.3e-53 210.7 170 60.6
C07p02610 Brassica napus HOM05D004416 ORTHO05D005439 9.3e-53 210.7 173 59.0
BolC7t40659H Brassica oleracea HOM05D004416 ORTHO05D005439 9.3e-53 210.7 173 59.0
C06p44170 Brassica napus HOM05D004416 ORTHO05D005439 3.5e-52 208.8 170 61.2
C07p16300 Brassica napus HOM05D004416 ORTHO05D005439 7.9e-52 207.6 170 60.0
BcaB02g07287 Brassica carinata HOM05D004416 ORTHO05D005439 1.8e-51 206.5 170 60.6
BcaB04g18755 Brassica carinata HOM05D004416 ORTHO05D005439 1.8e-51 206.5 170 60.6
A05p24430 Brassica napus HOM05D004416 ORTHO05D005439 1.8e-51 206.5 157 66.9
BolC6t39489H Brassica oleracea HOM05D004416 ORTHO05D005439 3.9e-51 205.3 170 60.6
BcaC08g44284 Brassica carinata HOM05D004416 ORTHO05D005439 2.5e-50 202.6 168 60.1
A02p33880 Brassica napus HOM05D004416 ORTHO05D005439 2.5e-50 202.6 163 60.7
A06p23940 Brassica napus HOM05D004416 ORTHO05D005439 3.3e-50 202.2 169 59.2
BcaC06g35428 Brassica carinata HOM05D004416 ORTHO05D005439 4.3e-50 201.8 170 58.8
BraA06t25484Z Brassica rapa HOM05D004416 ORTHO05D005439 4.3e-50 201.8 163 60.1
BraA02t08406Z Brassica rapa HOM05D004416 ORTHO05D005439 7.4e-50 201.1 163 60.1
BcaB03g16343 Brassica carinata HOM05D004416 ORTHO05D005439 9.7e-50 200.7 170 58.2
BcaB05g22410 Brassica carinata HOM05D004416 ORTHO05D005439 2.2e-49 199.5 170 58.8
A03p64740 Brassica napus HOM05D004416 ORTHO05D005439 2.2e-49 199.5 163 60.1
BraA01t02500Z Brassica rapa HOM05D004416 ORTHO05D005439 2.2e-49 199.5 163 60.1
BraA03t15536Z Brassica rapa HOM05D004416 ORTHO05D005439 2.2e-49 199.5 163 60.1
A05p21040 Brassica napus HOM05D004416 ORTHO05D005439 3.7e-49 198.7 163 60.1
BraA05t21008Z Brassica rapa HOM05D004416 ORTHO05D005439 3.7e-49 198.7 163 60.1
C03p64670 Brassica napus HOM05D004416 ORTHO05D005439 4.8e-49 198.4 154 63.6
BolC3t18725H Brassica oleracea HOM05D004416 ORTHO05D005439 4.8e-49 198.4 154 63.6
BraA04t16567Z Brassica rapa HOM05D004416 ORTHO05D005439 4.8e-49 198.4 163 59.5
BcaB04g18146 Brassica carinata HOM05D004416 ORTHO05D005439 6.3e-49 198.0 165 59.4
A05p24910 Brassica napus HOM05D004416 ORTHO05D005439 6.3e-49 198.0 163 59.5
A06p35830 Brassica napus HOM05D004416 ORTHO05D005439 8.2e-49 197.6 169 58.0
BcaB08g35239 Brassica carinata HOM05D004416 ORTHO05D005439 1.1e-48 197.2 170 58.2
C04p46680 Brassica napus HOM05D004416 ORTHO05D005439 1.4e-48 196.8 163 65.6
A06p26990 Brassica napus HOM05D004416 ORTHO05D005439 1.5e-47 193.4 170 57.1
A06p21490 Brassica napus HOM05D004416 ORTHO05D005439 2.0e-47 193.0 163 58.3
BcaB05g23431 Brassica carinata HOM05D004416 ORTHO05D005439 3.4e-47 192.2 167 58.1
BcaB01g01525 Brassica carinata HOM05D004416 ORTHO05D005439 4.5e-47 191.8 165 57.6
BcaB01g02103 Brassica carinata HOM05D004416 ORTHO05D005439 4.5e-47 191.8 165 58.8
BcaB04g17617 Brassica carinata HOM05D004416 ORTHO05D005439 4.5e-47 191.8 150 62.0
BcaB01g01830 Brassica carinata HOM05D004416 ORTHO05D005439 1.0e-46 190.7 165 58.2
BraA06t25908Z Brassica rapa HOM05D004416 ORTHO05D005439 3.8e-46 188.7 158 58.2
BcaB08g35481 Brassica carinata HOM05D004416 ORTHO05D005439 5.0e-46 188.3 165 56.4
BcaB08g34713 Brassica carinata HOM05D004416 ORTHO05D005439 6.5e-46 188.0 166 56.0
C02p40220 Brassica napus HOM05D004416 ORTHO05D005439 8.5e-46 187.6 168 57.7
BcaC03g16239 Brassica carinata HOM05D004416 ORTHO05D005439 1.1e-45 187.2 168 57.1
BolC2t10047H Brassica oleracea HOM05D004416 ORTHO05D005439 1.1e-45 187.2 168 57.1
BcaB08g35284 Brassica carinata HOM05D004416 ORTHO05D005439 5.1e-43 178.3 160 56.2
BcaB06g27913 Brassica carinata HOM05D004416 ORTHO05D005439 2.0e-42 176.4 138 62.3
BcaC03g15854 Brassica carinata HOM05D004416 ORTHO05D005439 7.4e-42 174.5 126 65.9
A04p13940 Brassica napus HOM05D004416 ORTHO05D005439 2.2e-41 172.9 116 77.6
BolC7t40921H Brassica oleracea HOM05D004416 ORTHO05D005439 1.5e-39 166.8 168 53.0
C07p05230 Brassica napus HOM05D004416 ORTHO05D005439 2.6e-39 166.0 168 53.0
A06p23410 Brassica napus HOM05D004416 ORTHO05D005439 4.5e-39 165.2 126 61.1
BcaB06g27181 Brassica carinata HOM05D004416 ORTHO05D005439 5.9e-39 164.9 137 62.0
BcaB07g33958 Brassica carinata HOM05D004416 ORTHO05D005439 3.2e-37 159.1 114 64.0
BcaB06g26187 Brassica carinata HOM05D004416 ORTHO05D005439 4.2e-37 158.7 165 50.9
C06p17070 Brassica napus HOM05D004416 ORTHO05D005439 5.5e-37 158.3 168 50.0
BraA05t21334Z Brassica rapa HOM05D004416 ORTHO05D005439 2.1e-36 156.4 98 73.5
BolC6t36905H Brassica oleracea HOM05D004416 ORTHO05D005439 1.0e-35 154.1 168 48.8
BraA10t42853Z Brassica rapa HOM05D004416 ORTHO05D005439 1.0e-35 154.1 163 50.3
C03p70170 Brassica napus HOM05D004416 ORTHO05D005439 2.3e-35 152.9 168 53.0
A10p05910 Brassica napus HOM05D004416 ORTHO05D005439 3.9e-35 152.1 163 49.7
BcaB08g34992 Brassica carinata HOM05D004416 ORTHO05D005439 5.1e-35 151.8 114 59.6
C02p48380 Brassica napus HOM05D004416 ORTHO05D005439 5.1e-35 151.8 324 34.6
BolC2t10869H Brassica oleracea HOM05D004416 ORTHO05D005439 5.1e-35 151.8 324 34.6
A07p03080 Brassica napus HOM05D004416 ORTHO05D005439 4.4e-34 148.7 156 50.6
A01p28270 Brassica napus HOM05D004416 ORTHO05D005439 9.7e-34 147.5 98 68.4
BcaC06g36337 Brassica carinata HOM05D004416 ORTHO05D005439 4.8e-33 145.2 168 47.6
C05p32850 Brassica napus HOM05D004416 ORTHO05D005439 9.1e-32 141.0 123 59.3
BolC5t32016H Brassica oleracea HOM05D004416 ORTHO05D005439 9.1e-32 141.0 123 59.3
C05p42380 Brassica napus HOM05D004416 ORTHO05D005439 5.9e-31 138.3 116 60.3
BolC5t32967H Brassica oleracea HOM05D004416 ORTHO05D005439 5.9e-31 138.3 116 60.3
BcaB06g27354 Brassica carinata HOM05D004416 ORTHO05D005439 7.7e-31 137.9 126 52.4
BraA07t27948Z Brassica rapa HOM05D004416 ORTHO05D005439 1.7e-30 136.7 110 62.7
BolC4t26256H Brassica oleracea HOM05D004416 ORTHO05D005439 2.2e-30 136.3 133 60.2
BolC4t26159H Brassica oleracea HOM05D004416 ORTHO05D005439 5.0e-30 135.2 68 92.6
BcaB01g01334 Brassica carinata HOM05D004416 ORTHO05D005439 3.2e-29 132.5 166 43.4
A07p01480 Brassica napus HOM05D004416 ORTHO05D005439 3.2e-29 132.5 110 61.8
C06p19740 Brassica napus HOM05D004416 ORTHO05D005439 7.2e-29 131.3 145 51.7
BcaB02g11237 Brassica carinata HOM05D004416 ORTHO05D005439 9.4e-29 131.0 108 60.2
BcaB02g10429 Brassica carinata HOM05D004416 ORTHO05D005439 3.6e-28 129.0 170 44.7
C09p56380 Brassica napus HOM05D004416 ORTHO05D005439 1.4e-27 127.1 81 76.5
A04p03910 Brassica napus HOM05D004416 ORTHO05D005439 2.3e-27 126.3 91 72.5
BraA04t16112Z Brassica rapa HOM05D004416 ORTHO05D005439 2.3e-27 126.3 91 72.5
C04p30580 Brassica napus HOM05D004416 ORTHO05D005439 5.2e-27 125.2 168 42.9
BcaB05g23588 Brassica carinata HOM05D004416 ORTHO05D005439 6.7e-27 124.8 158 43.7
BcaB03g16728 Brassica carinata HOM05D004416 ORTHO05D005439 1.5e-26 123.6 160 43.8
A01p27350 Brassica napus HOM05D004416 ORTHO05D005439 2.6e-26 122.9 99 62.6
A07p06300 Brassica napus HOM05D004416 ORTHO05D005439 3.3e-26 122.5 163 42.3
A05p23250 Brassica napus HOM05D004416 ORTHO05D005439 1.3e-25 120.6 103 59.2
A10p08170 Brassica napus HOM05D004416 ORTHO05D005439 1.7e-25 120.2 86 73.3
BraSC35t45982Z Brassica rapa HOM05D004416 ORTHO05D005439 1.7e-25 120.2 86 73.3
BcaB03g16764 Brassica carinata HOM05D004416 ORTHO05D005439 2.8e-25 119.4 148 44.6
BcaB07g33907 Brassica carinata HOM05D004416 ORTHO05D005439 2.4e-24 116.3 89 68.5
BcaB04g18307 Brassica carinata HOM05D004416 ORTHO05D005439 9.1e-24 114.4 87 69.0
C07p09190 Brassica napus HOM05D004416 ORTHO05D005439 1.6e-23 113.6 94 60.6
BcaB02g06414 Brassica carinata HOM05D004416 ORTHO05D005439 2.6e-23 112.8 86 69.8
A06p14140 Brassica napus HOM05D004416 ORTHO05D005439 2.6e-23 112.8 163 41.1
A03p65040 Brassica napus HOM05D004416 ORTHO05D005439 6.5e-22 108.2 57 89.5
BcaB07g32851 Brassica carinata HOM05D004416 ORTHO05D005439 5.5e-21 105.1 86 62.8
A06p19220 Brassica napus HOM05D004416 ORTHO05D005439 2.7e-20 102.8 99 54.5
BolC7t41331H Brassica oleracea HOM05D004416 ORTHO05D005439 6.1e-20 101.7 138 45.7
BolC2t09672H Brassica oleracea HOM05D004416 ORTHO05D005439 8.0e-20 101.3 92 62.0
C03p88240 Brassica napus HOM05D004416 ORTHO05D005439 1.8e-19 100.1 145 46.9
BraA07t28105Z Brassica rapa HOM05D004416 ORTHO05D005439 2.8e-17 92.8 91 53.8
C01p33390 Brassica napus HOM05D004416 ORTHO05D005439 4.8e-17 92.0 99 52.5
A06p24200 Brassica napus HOM05D004416 ORTHO05D005439 1.1e-16 90.9 84 52.4
C05p42270 Brassica napus HOM05D004416 ORTHO05D005439 2.9e-14 82.8 85 50.6
C02p36050 Brassica napus HOM05D004416 ORTHO05D005439 5.0e-14 82.0 85 50.6
C02p36020 Brassica napus HOM05D004416 ORTHO05D005439 1.9e-13 80.1 85 48.2
BolC2t09620H Brassica oleracea HOM05D004416 ORTHO05D005439 1.9e-13 80.1 85 49.4
C07p06580 Brassica napus HOM05D004416 ORTHO05D005439 1.2e-12 77.4 155 34.8
BolC7t41080H Brassica oleracea HOM05D004416 ORTHO05D005439 1.2e-12 77.4 155 34.8
A01p25060 Brassica napus HOM05D004416 ORTHO05D005439 3.6e-12 75.9 74 51.4
BraA01t02875Z Brassica rapa HOM05D004416 ORTHO05D005439 4.7e-12 75.5 74 54.1
A09p32950 Brassica napus HOM05D004416 ORTHO05D005439 3.0e-11 72.8 48 64.6
BraA04t16462Z Brassica rapa HOM05D004416 ORTHO05D005439 1.5e-10 70.5 64 56.2
C02p36030 Brassica napus HOM05D004416 ORTHO05D033189 3.4e-10 69.3 48 64.6
C02p36060 Brassica napus HOM05D004416 ORTHO05D033189 3.4e-10 69.3 48 64.6
BolC2t09621H Brassica oleracea HOM05D004416 ORTHO05D033189 3.4e-10 69.3 48 64.6
C06p12610 Brassica napus HOM05D004416 ORTHO05D005439 9.8e-10 67.8 73 50.7
A05p23220 Brassica napus HOM05D004416 ORTHO05D005439 3.7e-09 65.9 50 60.0
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 8.3e-09 64.7 122 34.4
Rhsim12G0105400 Rhododendron simsii HOM05D002915 ORTHO05D003004 2.4e-08 63.2 123 32.5
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 5.4e-08 62.0 118 29.7
ECA233G1149 Erigeron canadensis HOM05D000825 ORTHO05D003004 1.2e-07 60.8 117 34.2
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 2.0e-07 60.1 125 32.0
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 7.7e-07 58.2 128 28.9
Rhsim12G0105300 Rhododendron simsii HOM05D002915 ORTHO05D003004 7.7e-07 58.2 118 31.4
Lj1g0003622 Lotus japonicus HOM05D002915 ORTHO05D003004 1.3e-06 57.4 131 29.8
Rhsim13G0213700 Rhododendron simsii HOM05D002915 ORTHO05D003004 1.3e-06 57.4 118 31.4
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 2.9e-06 56.2 129 29.5
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 2.9e-06 56.2 129 29.5
Rhsim02G0221300 Rhododendron simsii HOM05D002915 ORTHO05D003004 2.9e-06 56.2 118 30.5
Atru.chr1.712 Acer truncatum HOM05D002915 ORTHO05D003004 3.8e-06 55.8 125 30.4
BcaC05g28454 Brassica carinata HOM05D001379 ORTHO05D001277 3.8e-06 55.8 163 23.9
BolC1t04764H Brassica oleracea HOM05D001379 ORTHO05D001277 5.0e-06 55.5 163 23.9
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 5.0e-06 55.5 120 30.0
Sp6g11210 Schrenkiella parvula HOM05D001379 ORTHO05D001277 5.0e-06 55.5 84 41.7
C04p55390 Brassica napus HOM05D001379 ORTHO05D001277 6.6e-06 55.1 163 23.3
BolC5t33264H Brassica oleracea HOM05D001379 ORTHO05D001277 8.6e-06 54.7 163 23.3


User provided reference genes

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