Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g15856 Brassica carinata HOM05D000518 ORTHO05D000737 1.8e-108 396.0 211 100.0
C02p36080 Brassica napus HOM05D000518 ORTHO05D000737 3.4e-102 375.2 201 100.0
BolC2t09623H Brassica oleracea HOM05D000518 ORTHO05D000737 9.8e-102 373.6 201 99.5
A02p22420 Brassica napus HOM05D000518 ORTHO05D000737 4.9e-101 371.3 201 98.5
BraA02t07246Z Brassica rapa HOM05D000518 ORTHO05D000737 1.4e-100 369.8 201 98.0
BcaB03g16054 Brassica carinata HOM05D000518 ORTHO05D000737 7.0e-100 367.5 201 96.5
BcaB05g25164 Brassica carinata HOM05D000518 ORTHO05D000737 9.2e-100 367.1 202 98.5
Sp5g33950 Schrenkiella parvula HOM05D000518 ORTHO05D000737 2.7e-99 365.5 201 96.0
AT1G78920 Arabidopsis thaliana HOM05D000518 ORTHO05D000737 3.5e-99 365.2 201 95.5
CARHR072520 Cardamine hirsuta HOM05D000518 ORTHO05D000737 4.6e-99 364.8 201 94.5
BcaC08g47441 Brassica carinata HOM05D000518 ORTHO05D000737 7.8e-99 364.0 201 95.5
A07p44090 Brassica napus HOM05D000518 ORTHO05D000737 7.8e-99 364.0 201 95.5
BolC6t40299H Brassica oleracea HOM05D000518 ORTHO05D000737 7.8e-99 364.0 201 95.5
BraA07t31917Z Brassica rapa HOM05D000518 ORTHO05D000737 7.8e-99 364.0 201 95.5
C06p52820 Brassica napus HOM05D000518 ORTHO05D000737 1.0e-98 363.6 201 95.0
Carub.0002s2576 Capsella rubella HOM05D000518 ORTHO05D000737 3.0e-98 362.1 201 94.5
AL2G39350 Arabidopsis lyrata HOM05D000518 ORTHO05D000737 3.9e-98 361.7 201 94.0
Thhalv10018137m.g Eutrema salsugineum HOM05D000518 ORTHO05D000737 3.9e-98 361.7 201 94.0
THA.LOC104812334 Tarenaya hassleriana HOM05D000518 ORTHO05D000737 5.8e-94 347.8 201 89.6
Aa31LG4G2070 Aethionema arabicum HOM05D000518 ORTHO05D000737 7.5e-94 347.4 201 87.6
THA.LOC104808107 Tarenaya hassleriana HOM05D000518 ORTHO05D000737 4.6e-91 338.2 205 87.3
AT1G16780 Arabidopsis thaliana HOM05D000518 ORTHO05D000737 1.1e-89 333.6 201 86.6
CARHR017240 Cardamine hirsuta HOM05D000518 ORTHO05D000737 3.3e-89 332.0 201 86.1
Potri.010G254200 Populus trichocarpa HOM05D000518 ORTHO05D000737 1.9e-84 316.2 201 81.6
CSS0006684 Camellia sinensis var. sinensis HOM05D000518 ORTHO05D000737 9.2e-84 313.9 199 81.4
arahy.Tifrunner.gnm1.ann1.35JPC8 Arachis hypogaea HOM05D000518 ORTHO05D000737 1.0e-82 310.5 206 78.6
arahy.Tifrunner.gnm1.ann1.G1ZWS1 Arachis hypogaea HOM05D000518 ORTHO05D000737 1.0e-82 310.5 206 78.6
Ciclev10013931m.g Citrus clementina HOM05D000518 ORTHO05D000737 2.3e-82 309.3 201 78.6
Duzib235G0117 Durio zibethinus HOM05D000518 ORTHO05D000737 3.0e-82 308.9 201 79.6
Manes.06G179000 Manihot esculenta HOM05D000518 ORTHO05D000737 3.0e-82 308.9 201 79.6
Prupe.3G024800 Prunus persica HOM05D000518 ORTHO05D000737 8.6e-82 307.4 201 79.6
ATR0626G270 Amborella trichopoda HOM05D000518 ORTHO05D000737 1.1e-81 307.0 201 77.1
CiPaw.02G128500 Carya illinoinensis HOM05D000518 ORTHO05D000737 2.5e-81 305.8 199 80.4
Glyma.07G001500 Glycine max HOM05D000518 ORTHO05D000737 2.5e-81 305.8 200 79.0
Gohir.A10G001500 Gossypium hirsutum HOM05D000518 ORTHO05D000737 3.3e-81 305.4 201 79.6
Cc04_g00140 Coffea canephora HOM05D000518 ORTHO05D000737 4.3e-81 305.1 199 77.4
Duzib192G0563 Durio zibethinus HOM05D000518 ORTHO05D000737 5.6e-81 304.7 200 79.5
Gohir.D06G120900 Gossypium hirsutum HOM05D000518 ORTHO05D000737 5.6e-81 304.7 201 79.1
Gorai.010G141300 Gossypium raimondii HOM05D000518 ORTHO05D000737 5.6e-81 304.7 201 79.1
CAN.G264.26 Capsicum annuum HOM05D000518 ORTHO05D000737 7.3e-81 304.3 199 77.9
Rhsim08G0251300 Rhododendron simsii HOM05D000518 ORTHO05D000737 7.3e-81 304.3 199 79.4
Gorai.011G002000 Gossypium raimondii HOM05D000518 ORTHO05D000737 9.6e-81 303.9 201 79.6
Nitab4.5_0000099g0070 Nicotiana tabacum HOM05D000518 ORTHO05D000737 1.2e-80 303.5 199 77.4
Aqoxy7G02688 Aquilegia oxysepala HOM05D000518 ORTHO05D000737 1.6e-80 303.1 200 79.0
Dinv20326 Davidia involucrata HOM05D000518 ORTHO05D000737 2.1e-80 302.8 199 79.4
Nitab4.5_0005691g0030 Nicotiana tabacum HOM05D000518 ORTHO05D000737 2.8e-80 302.4 199 77.4
Atru.chr1.2607 Acer truncatum HOM05D000518 ORTHO05D000737 3.6e-80 302.0 201 77.6
Ca_20978_v3 Cicer arietinum L. HOM05D000518 ORTHO05D000737 3.6e-80 302.0 200 78.0
MD17G1161300 Malus domestica HOM05D000518 ORTHO05D000737 3.6e-80 302.0 199 80.9
Sed0023679 Sechium edule HOM05D000518 ORTHO05D000737 3.6e-80 302.0 199 77.4
GSVIVG01029563001 Vitis vinifera HOM05D000518 ORTHO05D000737 3.6e-80 302.0 199 78.4
Manes.14G008800 Manihot esculenta HOM05D000518 ORTHO05D000737 8.1e-80 300.8 201 78.1
CANSAT01G0920 Cannabis sativa HOM05D000518 ORTHO05D000737 1.1e-79 300.4 201 77.6
QL05p088440 Quercus lobata HOM05D000518 ORTHO05D000737 1.1e-79 300.4 201 78.6
Cfa003430 Carpinus fangiana HOM05D000518 ORTHO05D000737 1.8e-79 299.7 199 78.4
Lj3g0016361 Lotus japonicus HOM05D000518 ORTHO05D000737 2.4e-79 299.3 201 76.6
Nn8g41075 Nelumbo nucifera HOM05D000518 ORTHO05D000737 2.4e-79 299.3 199 76.9
RcHm_v2.0_Chr2g0149161 Rosa chinensis HOM05D000518 ORTHO05D000737 3.1e-79 298.9 201 78.1
Sabra10G0197700 Salix brachista HOM05D000518 ORTHO05D000737 3.1e-79 298.9 231 70.6
TAR383G0005 Trochodendron aralioides HOM05D000518 ORTHO05D000737 3.1e-79 298.9 199 77.4
MD09G1167000 Malus domestica HOM05D000518 ORTHO05D000737 4.0e-79 298.5 201 79.1
Medtr4g005280 Medicago truncatula HOM05D000518 ORTHO05D000737 4.0e-79 298.5 200 78.5
CiPaw.01G207500 Carya illinoinensis HOM05D000518 ORTHO05D000737 5.2e-79 298.1 199 78.4
Gohir.A06G116100 Gossypium hirsutum HOM05D000518 ORTHO05D000737 8.9e-79 297.4 200 78.0
Migut.M01833 Erythranthe guttata HOM05D000518 ORTHO05D000737 1.2e-78 297.0 199 76.4
FAN02G0571 Fragaria x ananassa HOM05D000518 ORTHO05D000737 1.2e-78 297.0 201 76.6
FAN05G0574 Fragaria x ananassa HOM05D000518 ORTHO05D000737 1.2e-78 297.0 201 76.6
Glyma.08G225500 Glycine max HOM05D000518 ORTHO05D000737 1.2e-78 297.0 200 77.0
ClCG09G001720 Citrullus lanatus HOM05D000518 ORTHO05D000737 1.5e-78 296.6 201 75.6
MELO3C024272.2 Cucumis melo HOM05D000518 ORTHO05D000737 1.5e-78 296.6 199 76.9
FAN09G0077 Fragaria x ananassa HOM05D000518 ORTHO05D000737 2.0e-78 296.2 201 76.6
Phvul.010G164900 Phaseolus vulgaris HOM05D000518 ORTHO05D000737 2.0e-78 296.2 202 76.7
Sopen04g027850 Solanum pennellii HOM05D000518 ORTHO05D000737 2.0e-78 296.2 199 74.9
CsaV3_7G033610 Cucumis sativus L. HOM05D000518 ORTHO05D000737 3.4e-78 295.4 199 76.9
FvH4_6g36660 Fragaria vesca HOM05D000518 ORTHO05D000737 4.4e-78 295.0 201 76.1
FAN14G3566 Fragaria x ananassa HOM05D000518 ORTHO05D000737 4.4e-78 295.0 201 76.1
VMungo0331G2033 Vigna mungo HOM05D000518 ORTHO05D000737 5.8e-78 294.7 203 76.4
TAR636G2928 Trochodendron aralioides HOM05D000518 ORTHO05D000737 7.6e-78 294.3 199 75.9
MBI13_g31563_MAGBIO Magnolia biondii HOM05D000518 ORTHO05D000737 9.9e-78 293.9 197 77.2
Solyc04g071880.3 Solanum lycopersicum HOM05D000518 ORTHO05D000737 9.9e-78 293.9 199 74.4
Sabra15G0099100 Salix brachista HOM05D000518 ORTHO05D000737 1.3e-77 293.5 206 75.7
Eucgr.J03186 Eucalyptus grandis HOM05D000518 ORTHO05D000737 2.2e-77 292.7 202 75.2
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 2.9e-77 292.4 196 76.5
Sc12g0011360 Simmondsia chinensis HOM05D000518 ORTHO05D000737 2.9e-77 292.4 196 76.5
Psat7g265000 Pisum sativum HOM05D000518 ORTHO05D000737 3.8e-77 292.0 200 75.5
Thecc.06G054600 Theobroma cacao HOM05D000518 ORTHO05D000737 3.8e-77 292.0 201 77.1
Cpa.g.sc176.21 Carica papaya HOM05D000518 ORTHO05D000737 4.9e-77 291.6 200 78.5
Lj9A543G65 Lonicera japonica HOM05D000518 ORTHO05D000737 4.9e-77 291.6 203 77.3
Lalb_Chr01g0011621 Lupinus albus HOM05D000518 ORTHO05D000737 4.9e-77 291.6 201 76.1
vmacro18736 Vaccinium macrocarpon HOM05D000518 ORTHO05D000737 6.4e-77 291.2 224 71.0
Sabra15G0099500 Salix brachista HOM05D000518 ORTHO05D000737 8.4e-77 290.8 206 75.2
Sabra15G0099800 Salix brachista HOM05D000518 ORTHO05D000737 8.4e-77 290.8 206 75.2
Sabra15G0100100 Salix brachista HOM05D000518 ORTHO05D000737 8.4e-77 290.8 206 75.2
MSTRG.6874 Avicennia marina HOM05D000518 ORTHO05D000737 1.1e-76 290.4 199 75.9
Lalb_Chr04g0264811 Lupinus albus HOM05D000518 ORTHO05D000737 1.9e-76 289.7 201 77.6
PGSC0003DMG400025085 Solanum tuberosum HOM05D000518 ORTHO05D000737 1.9e-76 289.7 199 74.9
EL10Ac7g18127 Beta vulgaris HOM05D000518 ORTHO05D000737 3.2e-76 288.9 199 75.4
PGR031G2391 Punica granatum HOM05D000518 ORTHO05D000737 5.4e-76 288.1 221 70.6
TWI18G0524 Tripterygium wilfordii HOM05D000518 ORTHO05D000737 5.4e-76 288.1 201 74.1
Hund05667 Selenicereus undatus HOM05D000518 ORTHO05D000737 7.1e-76 287.7 199 74.9
ECA247G0909 Erigeron canadensis HOM05D000518 ORTHO05D000737 9.3e-76 287.3 199 74.9
Ah.08g217850 Amaranthus hybridus HOM05D000518 ORTHO05D000737 1.2e-75 287.0 200 74.5
CDE02G0119 Ceratophyllum demersum HOM05D000518 ORTHO05D000737 1.6e-75 286.6 199 74.9
TPR.G38716 Trifolium pratense HOM05D000518 ORTHO05D000737 2.1e-75 286.2 202 73.8
HPP92_025957 Vanilla planifolia HOM05D000518 ORTHO05D000737 2.7e-75 285.8 199 73.9
Ah.15g094270 Amaranthus hybridus HOM05D000518 ORTHO05D000737 4.6e-75 285.0 199 75.4
HanXRQChr05g0129041 Helianthus annuus HOM05D000518 ORTHO05D000737 2.3e-74 282.7 199 73.4
Lsat_1_v5_gn_7_12700 Lactuca sativa HOM05D000518 ORTHO05D000737 3.9e-74 282.0 199 71.9
PSO170G4965 Papaver somniferum HOM05D000518 ORTHO05D000737 8.7e-74 280.8 200 74.0
TWI12G1233 Tripterygium wilfordii HOM05D000518 ORTHO05D000737 1.1e-73 280.4 201 73.1
PSO063G4458 Papaver somniferum HOM05D000518 ORTHO05D000737 1.5e-73 280.0 200 74.0
Peaxi162Scf00079g01916 Petunia axillaris HOM05D000518 ORTHO05D000737 9.6e-73 277.3 215 69.3
SGA_v2.0_scaffold495G52458 Striga asiatica HOM05D000518 ORTHO05D000737 2.1e-72 276.2 238 63.4
Zm00001eb031220 Zea mays HOM05D000518 ORTHO05D000737 9.9e-70 267.3 200 71.0
Zm00001eb135590 Zea mays HOM05D000518 ORTHO05D000737 9.9e-70 267.3 200 70.5
Os02g0537900 Oryza sativa ssp. japonica HOM05D000518 ORTHO05D000737 2.9e-69 265.8 200 70.5
SEGI_21310 Sequoiadendron giganteum HOM05D000518 ORTHO05D000737 1.3e-66 256.9 201 69.2
SEGI_27494 Sequoiadendron giganteum HOM05D000518 ORTHO05D000737 1.3e-66 256.9 201 69.2
Oeu042879.1 Olea europaea HOM05D000518 ORTHO05D000737 1.7e-66 256.5 162 82.1
unitig_899.g15340 Utricularia gibba HOM05D000518 ORTHO05D000737 1.1e-65 253.8 196 69.4
AUR62025706 Chenopodium quinoa HOM05D000518 ORTHO05D000737 1.3e-64 250.4 161 81.4
Oeu052329.1 Olea europaea HOM05D000518 ORTHO05D000737 5.4e-60 235.0 181 71.8
Oeu052328.1 Olea europaea HOM05D000518 ORTHO05D000737 7.1e-60 234.6 181 71.3
SMO271G0014 Selaginella moellendorffii HOM05D000518 ORTHO05D000737 1.6e-59 233.4 200 62.0
Mapoly0177s0007 Marchantia polymorpha HOM05D000518 ORTHO05D000737 2.5e-57 226.1 203 60.6
Pp3c17_11450 Physcomitrium patens HOM05D000518 ORTHO05D000737 8.1e-56 221.1 205 59.5
Sabra08G0001300 Salix brachista HOM05D000518 ORTHO05D000737 6.9e-55 218.0 184 65.8
DCAR_007674 Daucus carota HOM05D000518 ORTHO05D000737 3.2e-52 209.1 119 89.1
Pp3c1_35630 Physcomitrium patens HOM05D000518 ORTHO05D000737 3.2e-52 209.1 204 58.3
AUR62001323 Chenopodium quinoa HOM05D000518 ORTHO05D000737 6.7e-50 201.4 151 72.2
Actinidia21895 Actinidia chinensis HOM05D000518 ORTHO05D000737 1.8e-42 176.8 141 71.6
Haze_16202 Corylus avellana HOM05D000518 ORTHO05D000737 9.0e-39 164.5 98 86.7
AagrBONN_evm.TU.Sc2ySwM_228.3551 Anthoceros agrestis HOM05D000518 ORTHO05D000737 4.2e-36 155.6 144 59.7
PRCOL_00007020 Prasinoderma coloniale HOM05D000518 ORTHO05D000737 2.7e-35 152.9 155 52.9
MCO15G560 Micromonas commoda HOM05D000518 ORTHO05D000737 4.8e-32 142.1 126 58.7
arahy.Tifrunner.gnm1.ann1.AK3WVB Arachis hypogaea HOM05D000518 ORTHO05D021464 1.1e-31 141.0 101 70.3
CDE04G1853 Ceratophyllum demersum HOM05D000518 ORTHO05D000737 1.1e-31 141.0 103 78.6
arahy.Tifrunner.gnm1.ann1.H95VZZ Arachis hypogaea HOM05D000518 ORTHO05D021464 1.8e-31 140.2 103 68.0
MD03G1207100 Malus domestica HOM05D000518 ORTHO05D000737 1.8e-31 140.2 179 50.3
arahy.Tifrunner.gnm1.ann1.1EL4AZ Arachis hypogaea HOM05D003175 ORTHO05D021464 1.8e-26 123.6 103 63.1
Haze_16203 Corylus avellana HOM05D000518 ORTHO05D021464 1.5e-20 104.0 178 38.8
CBR_g3376 Chara braunii HOM05D000518 ORTHO05D000737 7.2e-20 101.7 78 67.9
AagrBONN_evm.TU.Sc2ySwM_228.1293 Anthoceros agrestis HOM05D000518 ORTHO05D000737 5.9e-06 55.5 99 39.4
AagrBONN_evm.TU.Sc2ySwM_327.4 Anthoceros agrestis HOM05D000518 ORTHO05D000737 5.9e-06 55.5 99 39.4


User provided reference genes

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