Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g15727 Brassica carinata HOM05D000966 ORTHO05D096103 3.5e-49 198.0 99 100.0
BcaB05g25036 Brassica carinata HOM05D000966 ORTHO05D004359 1.6e-22 109.4 69 82.6
Thhalv10017998m.g Eutrema salsugineum HOM05D000966 ORTHO05D004359 3.1e-21 105.1 68 79.4
AL2G37500 Arabidopsis lyrata HOM05D000966 ORTHO05D004359 1.1e-18 96.7 65 76.9
AT1G77300 Arabidopsis thaliana HOM05D000966 ORTHO05D004359 7.0e-18 94.0 65 75.4
CARHR070780 Cardamine hirsuta HOM05D000966 ORTHO05D004359 2.0e-17 92.4 65 75.4
C06p51460 Brassica napus HOM05D000966 ORTHO05D004359 1.0e-16 90.1 58 79.3
BcaC08g47620 Brassica carinata HOM05D000966 ORTHO05D004359 2.3e-16 89.0 58 77.6
BolC6t40164H Brassica oleracea HOM05D000966 ORTHO05D004359 2.3e-16 89.0 58 77.6
BraA07t31805Z Brassica rapa HOM05D000966 ORTHO05D004359 2.3e-16 89.0 58 77.6
A07p42840 Brassica napus HOM05D000966 ORTHO05D004359 1.1e-15 86.7 58 75.9
Aa31LG4G7310 Aethionema arabicum HOM05D000966 ORTHO05D004359 5.2e-13 77.8 67 65.7
Carub.0002s2418 Capsella rubella HOM05D000966 ORTHO05D004359 7.5e-12 73.9 65 67.7
THA.LOC104812082 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 7.3e-07 57.4 67 47.8
THA.LOC104810214 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 2.1e-06 55.8 67 47.8
Sp5g32470 Schrenkiella parvula HOM05D000966 ORTHO05D004359 6.2e-06 54.3 46 65.2


User provided reference genes

Program Settings