Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g15320 Brassica carinata HOM05D000240 ORTHO05D092973 1.7e-67 259.2 135 100.0
A07p17590 Brassica napus HOM05D000240 ORTHO05D001140 3.9e-43 178.3 100 93.0
BraA07t29478Z Brassica rapa HOM05D000240 ORTHO05D001140 1.1e-42 176.8 100 92.0
C07p25550 Brassica napus HOM05D000240 ORTHO05D001140 2.5e-42 175.6 99 91.9
BolC7t43075H Brassica oleracea HOM05D000240 ORTHO05D001140 7.3e-42 174.1 99 90.9
BcaC06g34692 Brassica carinata HOM05D000240 ORTHO05D001140 2.8e-41 172.2 100 89.0
Sp2g30350 Schrenkiella parvula HOM05D000240 ORTHO05D001140 9.9e-31 137.1 103 74.8
BcaB02g10038 Brassica carinata HOM05D000240 ORTHO05D001140 3.9e-27 125.2 103 71.8
AL8G45210 Arabidopsis lyrata HOM05D000240 ORTHO05D001140 2.5e-26 122.5 106 70.8
AT5G66310 Arabidopsis thaliana HOM05D000240 ORTHO05D001140 3.3e-26 122.1 106 70.8
Thhalv10003607m.g Eutrema salsugineum HOM05D000240 ORTHO05D001140 4.0e-24 115.2 97 67.0
Carub.0008s2818 Capsella rubella HOM05D000240 ORTHO05D001140 2.9e-22 109.0 103 63.1
Aa31LG1G14800 Aethionema arabicum HOM05D000240 ORTHO05D001140 1.3e-17 93.6 103 56.3
CARHR281400 Cardamine hirsuta HOM05D000240 ORTHO05D001140 4.5e-15 85.1 97 53.6
THA.LOC104821320 Tarenaya hassleriana HOM05D000240 ORTHO05D001140 1.8e-08 63.2 130 41.5
Carub.0005s1755 Capsella rubella HOM05D000240 ORTHO05D001140 2.6e-07 59.3 97 42.3
Thhalv10010086m.g Eutrema salsugineum HOM05D000240 ORTHO05D001140 2.6e-07 59.3 103 39.8


User provided reference genes

Program Settings