Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g15185 Brassica carinata HOM05D000096 ORTHO05D010037 1.0e-81 306.6 146 100.0
BcaC04g19160 Brassica carinata HOM05D000096 ORTHO05D010037 5.2e-70 267.7 146 86.3
C02p27650 Brassica napus HOM05D000096 ORTHO05D010037 6.9e-70 267.3 137 93.4
A02p28680 Brassica napus HOM05D000096 ORTHO05D010037 1.3e-68 263.1 140 91.4
C03p63050 Brassica napus HOM05D000096 ORTHO05D010037 1.3e-68 263.1 140 91.4
C05p53330 Brassica napus HOM05D000096 ORTHO05D010037 1.3e-68 263.1 140 91.4
BolC7t42420H Brassica oleracea HOM05D000096 ORTHO05D010037 1.3e-68 263.1 150 84.7
BolC5t33999H Brassica oleracea HOM05D000096 ORTHO05D010037 4.9e-68 261.2 142 88.7
BraA02t07903Z Brassica rapa HOM05D000096 ORTHO05D010037 4.9e-68 261.2 140 90.7
C09p49170 Brassica napus HOM05D000096 ORTHO05D000045 1.9e-67 259.2 146 87.7
BolC5t34006H Brassica oleracea HOM05D000096 ORTHO05D010037 1.9e-67 259.2 140 90.0
BolC9t57766H Brassica oleracea HOM05D000096 ORTHO05D010037 4.2e-67 258.1 143 88.8
BolC2t10807H Brassica oleracea HOM05D000096 ORTHO05D010037 9.3e-67 256.9 153 82.4
BcaB01g00798 Brassica carinata HOM05D000096 ORTHO05D010037 7.8e-66 253.8 146 79.5
BolC8t48490H Brassica oleracea HOM05D000096 ORTHO05D010037 1.3e-65 253.1 150 84.7
A05p21280 Brassica napus HOM05D000096 ORTHO05D010037 1.1e-64 250.0 140 86.4
BraA05t21036Z Brassica rapa HOM05D000096 ORTHO05D010037 1.1e-64 250.0 140 86.4
BolC2t09047H Brassica oleracea HOM05D000096 ORTHO05D010037 1.5e-64 249.6 140 89.3
BolC5t34013H Brassica oleracea HOM05D000096 ORTHO05D010037 2.5e-64 248.8 150 84.0
C09p64170 Brassica napus HOM05D000096 ORTHO05D010037 9.0e-62 240.4 140 82.1
C02p47710 Brassica napus HOM05D000096 ORTHO05D010037 7.6e-61 237.3 142 81.7
C05p53360 Brassica napus HOM05D000096 ORTHO05D010037 1.1e-59 233.4 150 79.3
BolC9t59254H Brassica oleracea HOM05D000096 ORTHO05D010037 3.7e-55 218.4 146 73.3
BcaC09g50232 Brassica carinata HOM05D000096 ORTHO05D010037 1.7e-52 209.5 102 97.1
BcaC05g27600 Brassica carinata HOM05D000096 ORTHO05D010037 8.4e-52 207.2 102 96.1
BolC5t31840H Brassica oleracea HOM05D000096 ORTHO05D010037 1.9e-51 206.1 150 69.3
C05p35860 Brassica napus HOM05D000096 ORTHO05D000045 7.1e-51 204.1 129 81.4
C02p27170 Brassica napus HOM05D000096 ORTHO05D010037 2.1e-50 202.6 107 91.6
C09p17530 Brassica napus HOM05D000096 ORTHO05D010037 7.9e-50 200.7 106 91.5
C07p19090 Brassica napus HOM05D000096 ORTHO05D000045 1.9e-48 196.1 116 81.9
C09p23310 Brassica napus HOM05D000096 ORTHO05D010037 2.5e-48 195.7 110 87.3
BcaC05g27210 Brassica carinata HOM05D000096 ORTHO05D010037 8.2e-47 190.7 97 91.8
BcaC08g47173 Brassica carinata HOM05D000353 ORTHO05D010037 3.1e-46 188.7 128 66.4
A01p27030 Brassica napus HOM05D000096 ORTHO05D010037 1.1e-43 180.3 113 77.9
BcaC05g29108 Brassica carinata HOM05D000096 ORTHO05D010037 2.2e-36 156.0 77 93.5
BraA06t25745Z Brassica rapa HOM05D000096 ORTHO05D010037 8.8e-33 144.1 146 55.5
BcaB07g31907 Brassica carinata HOM05D000096 ORTHO05D010037 1.1e-32 143.7 96 72.9
C01p30060 Brassica napus HOM05D000353 ORTHO05D000174 7.4e-32 141.0 117 58.1
BraA01t02836Z Brassica rapa HOM05D000096 ORTHO05D010037 4.8e-31 138.3 76 84.2
A05p23810 Brassica napus HOM05D000096 ORTHO05D010037 5.0e-28 128.3 81 74.1
C05p53270 Brassica napus HOM05D000096 ORTHO05D010037 4.8e-23 111.7 58 91.4
BcaB02g11005 Brassica carinata HOM05D000096 ORTHO05D010037 1.5e-21 106.7 74 62.2
BcaB04g17265 Brassica carinata HOM05D000353 ORTHO05D000174 3.4e-21 105.5 74 62.2
BcaB03g15975 Brassica carinata HOM05D000096 ORTHO05D010037 4.5e-21 105.1 74 62.2
BcaB02g06411 Brassica carinata HOM05D000096 ORTHO05D010037 1.0e-20 104.0 74 62.2
BcaB05g23882 Brassica carinata HOM05D000353 ORTHO05D010037 1.0e-17 94.0 109 38.5
A09p11230 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-17 93.6 110 40.0
BolC1t00856H Brassica oleracea HOM05D000353 ORTHO05D010037 1.5e-16 90.1 127 33.9
BolC1t03913H Brassica oleracea HOM05D000353 ORTHO05D010037 1.5e-16 90.1 127 33.9
BolC6t35509H Brassica oleracea HOM05D000353 ORTHO05D000174 7.4e-16 87.8 126 36.5
A01p09370 Brassica napus HOM05D000096 ORTHO05D010037 2.2e-15 86.3 110 36.4
C01p13750 Brassica napus HOM05D000096 ORTHO05D010037 2.2e-15 86.3 110 36.4
C03p74460 Brassica napus HOM05D000096 ORTHO05D010037 2.2e-15 86.3 110 36.4
BolC5t32061H Brassica oleracea HOM05D000353 ORTHO05D010037 2.2e-15 86.3 127 35.4
C05p33350 Brassica napus HOM05D000353 ORTHO05D010037 3.7e-15 85.5 127 35.4
BolC2t09050H Brassica oleracea HOM05D000353 ORTHO05D000174 6.3e-15 84.7 114 36.8
BcaB08g34639 Brassica carinata HOM05D000353 ORTHO05D000174 1.4e-14 83.6 126 35.7
AL1G55630 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.4e-14 82.8 110 35.5
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.4e-14 82.8 110 35.5
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.4e-14 82.8 110 35.5
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 2.4e-14 82.8 110 35.5
AL8G21920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.4e-14 82.8 110 35.5
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.1e-14 82.4 110 35.5
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.1e-14 82.4 110 35.5
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.1e-14 82.4 110 35.5
BcaB01g01096 Brassica carinata HOM05D000096 ORTHO05D010037 3.1e-14 82.4 74 51.4
BolC8t47319H Brassica oleracea HOM05D000353 ORTHO05D000174 3.1e-14 82.4 114 35.1
AL1G50710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 4.1e-14 82.0 110 35.5
BolC2t10805H Brassica oleracea HOM05D000353 ORTHO05D010037 5.3e-14 81.6 114 35.1
AL9U11500 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 7.0e-14 81.3 110 35.5
C09p17500 Brassica napus HOM05D000353 ORTHO05D000174 7.0e-14 81.3 114 35.1
C09p23350 Brassica napus HOM05D000353 ORTHO05D000174 7.0e-14 81.3 114 35.1
A03p67580 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-13 80.5 114 34.2
BolC6t39887H Brassica oleracea HOM05D000353 ORTHO05D000174 1.2e-13 80.5 113 35.4
A02p28640 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-13 80.1 114 34.2
C03p63100 Brassica napus HOM05D000353 ORTHO05D000174 1.6e-13 80.1 114 34.2
C05p53390 Brassica napus HOM05D000353 ORTHO05D010037 2.0e-13 79.7 114 34.2
BcaC05g27207 Brassica carinata HOM05D000353 ORTHO05D000174 2.6e-13 79.3 114 34.2
BolC5t31838H Brassica oleracea HOM05D000353 ORTHO05D000174 2.6e-13 79.3 114 34.2
BolC5t34017H Brassica oleracea HOM05D000353 ORTHO05D000174 2.6e-13 79.3 114 33.3
A01p18290 Brassica napus HOM05D000353 ORTHO05D000174 3.5e-13 79.0 125 34.4
BolC4t26686H Brassica oleracea HOM05D000353 ORTHO05D000174 3.5e-13 79.0 114 34.2
A07p14780 Brassica napus HOM05D000353 ORTHO05D000174 5.9e-13 78.2 114 36.0
A05p21320 Brassica napus HOM05D000353 ORTHO05D000174 7.7e-13 77.8 114 33.3
C05p35900 Brassica napus HOM05D000353 ORTHO05D000174 7.7e-13 77.8 114 35.1
BolC5t32309H Brassica oleracea HOM05D000353 ORTHO05D000174 1.0e-12 77.4 114 33.3
Thhalv10029348m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.0e-12 77.4 110 34.5
BcaC05g27394 Brassica carinata HOM05D000096 ORTHO05D010037 1.3e-12 77.0 92 38.0
BolC5t34002H Brassica oleracea HOM05D000353 ORTHO05D000174 3.8e-12 75.5 114 33.3
Thhalv10000499m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 6.5e-12 74.7 110 33.6
BcaC07g37319 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-11 73.9 108 37.0
Thhalv10029167m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.1e-11 73.9 110 32.7
BraA05t21040Z Brassica rapa HOM05D000353 ORTHO05D000174 1.5e-11 73.6 111 33.3
BcaNung06211 Brassica carinata HOM05D000353 ORTHO05D000174 1.9e-11 73.2 114 33.3
Thhalv10002301m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.2e-11 72.4 124 31.5
BraA02t07899Z Brassica rapa HOM05D000353 ORTHO05D000174 4.2e-11 72.0 126 33.3
Thhalv10000424m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.5e-11 71.6 110 31.8
C09p64200 Brassica napus HOM05D000353 ORTHO05D000174 7.2e-11 71.2 124 31.5
BolC9t59257H Brassica oleracea HOM05D000353 ORTHO05D000174 7.2e-11 71.2 124 31.5
BraA01t02710Z Brassica rapa HOM05D000353 ORTHO05D000174 7.2e-11 71.2 126 32.5
BcaC08g43102 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-10 70.5 108 35.2
C06p03710 Brassica napus HOM05D000353 ORTHO05D010037 1.2e-10 70.5 108 35.2
C02p26060 Brassica napus HOM05D000353 ORTHO05D000174 3.6e-10 68.9 109 36.7
Thhalv10000133m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.6e-10 68.9 126 27.0
BcaC09g51435 Brassica carinata HOM05D000353 ORTHO05D000174 4.7e-10 68.6 112 33.9
BolC1t01288H Brassica oleracea HOM05D000353 ORTHO05D000174 4.7e-10 68.6 112 33.9
Thhalv10029440m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.7e-10 68.6 110 31.8
Thhalv10015289m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 6.1e-10 68.2 107 33.6
A01p31990 Brassica napus HOM05D000353 ORTHO05D013802 1.0e-09 67.4 96 35.4
Thhalv10029126m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.0e-09 67.4 117 29.1
C09p49200 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-09 67.0 83 38.6
C02p47680 Brassica napus HOM05D000353 ORTHO05D000174 1.8e-09 66.6 96 35.4
BolC9t55253H Brassica oleracea HOM05D000353 ORTHO05D000174 2.3e-09 66.2 96 35.4
Carub.0001s3687 Capsella rubella HOM05D000353 ORTHO05D000174 2.3e-09 66.2 109 27.5
Thhalv10026883m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.3e-09 66.2 110 30.9
Thhalv10028256m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.0e-09 65.9 126 26.2
AT1G36510 Arabidopsis thaliana HOM05D000353 ORTHO05D010037 4.0e-09 65.5 116 31.0
BolC9t57770H Brassica oleracea HOM05D000353 ORTHO05D010037 4.0e-09 65.5 83 38.6
A09p28970 Brassica napus HOM05D000353 ORTHO05D000174 5.2e-09 65.1 114 34.2
BraA09t38461Z Brassica rapa HOM05D000353 ORTHO05D000174 5.2e-09 65.1 114 34.2
Carub.0008s0742 Capsella rubella HOM05D000353 ORTHO05D010037 5.2e-09 65.1 109 27.5
Carub.0025s0004 Capsella rubella HOM05D000353 ORTHO05D000174 5.2e-09 65.1 116 29.3
Thhalv10027522m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 8.8e-09 64.3 112 32.1
A06p13610 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-08 63.5 96 33.3
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 2.0e-08 63.2 109 34.9
AL1G48730 Arabidopsis lyrata HOM05D000353 ORTHO05D031316 2.6e-08 62.8 122 29.5
Thhalv10002267m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.6e-08 62.8 106 31.1
TWI32G0194 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.6e-08 62.8 108 33.3
TWI38G0982 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.6e-08 62.8 108 33.3
BcaB08g34954 Brassica carinata HOM05D000353 ORTHO05D000174 3.3e-08 62.4 126 32.5
C05p39980 Brassica napus HOM05D000353 ORTHO05D000174 3.3e-08 62.4 114 31.6
BolC4t25352H Brassica oleracea HOM05D000353 ORTHO05D000174 3.3e-08 62.4 109 36.7
BcaNung06852 Brassica carinata HOM05D000353 ORTHO05D000174 5.7e-08 61.6 90 36.7
Carub.0011s0007 Capsella rubella HOM05D000353 ORTHO05D000174 5.7e-08 61.6 101 34.7
C03p18660 Brassica napus HOM05D000353 ORTHO05D000174 7.5e-08 61.2 109 33.9
AT3G32260 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 9.7e-08 60.8 113 30.1
C05p32800 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-07 60.5 109 33.0
C09p27100 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-07 60.5 127 33.1
Thhalv10002946m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.3e-07 60.5 101 31.7
BcaC06g36089 Brassica carinata HOM05D000353 ORTHO05D000174 1.7e-07 60.1 111 36.9
A03p66100 Brassica napus HOM05D000353 ORTHO05D000174 1.7e-07 60.1 126 31.7
A05p24550 Brassica napus HOM05D000353 ORTHO05D000174 1.7e-07 60.1 126 31.7
BcaB01g01518 Brassica carinata HOM05D000353 ORTHO05D000174 2.8e-07 59.3 106 32.1
BcaC05g25301 Brassica carinata HOM05D011161 ORTHO05D012637 2.8e-07 59.3 109 33.9
BolC5t29929H Brassica oleracea HOM05D011161 ORTHO05D012637 2.8e-07 59.3 109 33.9
Thhalv10002212m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.8e-07 59.3 92 31.5
TWI56G0628 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.8e-07 59.3 104 32.7
BolC2t10127H Brassica oleracea HOM05D000647 ORTHO05D000174 3.7e-07 58.9 100 33.0
A07p36560 Brassica napus HOM05D000353 ORTHO05D000174 4.8e-07 58.5 109 33.9
C06p15640 Brassica napus HOM05D000353 ORTHO05D000174 4.8e-07 58.5 109 33.9
BolC8t46849H Brassica oleracea HOM05D000353 ORTHO05D018805 4.8e-07 58.5 83 34.9
BcaC02g07613 Brassica carinata HOM05D000353 ORTHO05D000174 6.3e-07 58.2 111 35.1
A02p32050 Brassica napus HOM05D000353 ORTHO05D000174 6.3e-07 58.2 111 31.5
BraA02t08216Z Brassica rapa HOM05D000353 ORTHO05D000174 6.3e-07 58.2 111 31.5
AL5G11810 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 8.2e-07 57.8 126 32.5
Thhalv10029208m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 8.2e-07 57.8 118 27.1
BcaC02g09046 Brassica carinata HOM05D000353 ORTHO05D000174 1.1e-06 57.4 111 36.0
C08p07580 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-06 57.4 82 35.4
DCAR_027158 Daucus carota HOM05D002907 ORTHO05D005554 1.1e-06 57.4 107 24.3
Peaxi162Scf11584g00003 Petunia axillaris HOM05D002441 ORTHO05D002376 1.1e-06 57.4 122 30.3
CAN.G419.22 Capsicum annuum HOM05D002907 ORTHO05D005554 1.4e-06 57.0 98 28.6
Peaxi162Scf00006g02913 Petunia axillaris HOM05D002441 ORTHO05D002376 1.4e-06 57.0 120 28.3
BcaC05g29111 Brassica carinata HOM05D000353 ORTHO05D000174 1.8e-06 56.6 75 37.3
C07p16110 Brassica napus HOM05D009574 ORTHO05D012637 1.8e-06 56.6 109 33.9
C06p22090 Brassica napus HOM05D000353 ORTHO05D000174 2.4e-06 56.2 110 30.9
BolC2t10352H Brassica oleracea HOM05D000353 ORTHO05D000174 2.4e-06 56.2 126 30.2
BolC6t37396H Brassica oleracea HOM05D000353 ORTHO05D000174 2.4e-06 56.2 110 30.9
BolC8t48495H Brassica oleracea HOM05D000353 ORTHO05D000174 2.4e-06 56.2 74 39.2
BraA09t40707Z Brassica rapa HOM05D000353 ORTHO05D000174 2.4e-06 56.2 126 30.2
BcaB01g05981 Brassica carinata HOM05D009574 ORTHO05D012637 3.1e-06 55.8 127 29.9
C02p41140 Brassica napus HOM05D000647 ORTHO05D000174 4.1e-06 55.5 100 31.0
BolC3t20719H Brassica oleracea HOM05D000353 ORTHO05D000174 4.1e-06 55.5 122 30.3
Medtr4g032565 Medicago truncatula HOM05D002441 ORTHO05D002376 4.1e-06 55.5 108 36.1
Peaxi162Scf00429g00624 Petunia axillaris HOM05D002441 ORTHO05D002376 4.1e-06 55.5 128 28.1
Carub.0008s0745 Capsella rubella HOM05D000353 ORTHO05D000174 7.0e-06 54.7 109 25.7
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 7.0e-06 54.7 103 28.2
AT2G05642 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 9.1e-06 54.3 126 31.0
BcaB06g27108 Brassica carinata HOM05D000353 ORTHO05D000174 9.1e-06 54.3 111 31.5
Peaxi162Scf00347g00918 Petunia axillaris HOM05D002441 ORTHO05D002376 9.1e-06 54.3 127 28.3
Peaxi162Scf00385g00619 Petunia axillaris HOM05D002441 ORTHO05D002376 9.1e-06 54.3 116 31.0


User provided reference genes

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