Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14860 Brassica carinata HOM05D007540 ORTHO05D009531 1.0e-27 125.9 60 100.0
A02p14410 Brassica napus HOM05D007540 ORTHO05D009531 6.6e-19 96.7 59 83.1
BraA02t06505Z Brassica rapa HOM05D007540 ORTHO05D009531 6.6e-19 96.7 59 83.1
BcaC03g14859 Brassica carinata HOM05D007540 ORTHO05D009531 5.2e-16 87.0 59 72.9
C02p23290 Brassica napus HOM05D007540 ORTHO05D009531 1.0e-11 72.8 51 70.6
CARHR085710 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.0e-11 72.8 59 69.5
BcaB01g02546 Brassica carinata HOM05D007540 ORTHO05D009531 1.6e-09 65.5 59 61.0
CARHR085700 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.1e-09 65.1 60 63.3
BcaB01g02553 Brassica carinata HOM05D007540 ORTHO05D009531 2.8e-09 64.7 59 61.0
Carub.0002s0328 Capsella rubella HOM05D007540 ORTHO05D009531 2.8e-09 64.7 59 61.0
Carub.0007s3755 Capsella rubella HOM05D007540 ORTHO05D009531 2.8e-09 64.7 59 61.0
Carub.0007s3751 Capsella rubella HOM05D007540 ORTHO05D009531 6.2e-09 63.5 59 61.0
Carub.0001s2384 Capsella rubella HOM05D007540 ORTHO05D009531 1.1e-08 62.8 57 56.1
CARHR292600 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.4e-08 62.4 59 61.0
BcaB01g04016 Brassica carinata HOM05D007540 ORTHO05D009531 1.8e-08 62.0 57 61.4
CANSAT25G3055 Cannabis sativa HOM05D007540 ORTHO05D009531 1.8e-08 62.0 59 59.3
CANSAT25G3303 Cannabis sativa HOM05D007540 ORTHO05D009531 1.8e-08 62.0 57 54.4
BcaB04g16944 Brassica carinata HOM05D007540 ORTHO05D009531 2.3e-08 61.6 57 61.4
Carub.0001s3826 Capsella rubella HOM05D007540 ORTHO05D009531 3.1e-08 61.2 52 61.5
BcaB01g04012 Brassica carinata HOM05D007540 ORTHO05D009531 4.0e-08 60.8 57 61.4
CANSAT25G0386 Cannabis sativa HOM05D007540 ORTHO05D009531 4.0e-08 60.8 50 62.0
Carub.0003s1043 Capsella rubella HOM05D007540 ORTHO05D009531 4.0e-08 60.8 59 61.0
CARHR180370 Cardamine hirsuta HOM05D007540 ORTHO05D009531 4.0e-08 60.8 59 57.6
Carub.0005s0981 Capsella rubella HOM05D007540 ORTHO05D009531 8.9e-08 59.7 59 57.6
SalBow1G7590 Salvia bowleyana HOM05D007540 ORTHO05D009531 8.9e-08 59.7 48 58.3
BcaB01g04015 Brassica carinata HOM05D007540 ORTHO05D009531 1.2e-07 59.3 60 60.0
CANSAT25G1121 Cannabis sativa HOM05D007540 ORTHO05D009531 1.2e-07 59.3 50 60.0
BcaB01g04013 Brassica carinata HOM05D007540 ORTHO05D009531 1.5e-07 58.9 57 59.6
Carub.0005s1237 Capsella rubella HOM05D007540 ORTHO05D009531 1.5e-07 58.9 59 57.6
CANSAT35G1587 Cannabis sativa HOM05D007540 ORTHO05D009531 2.0e-07 58.5 55 56.4
Carub.0007s3246 Capsella rubella HOM05D007540 ORTHO05D009531 2.0e-07 58.5 59 55.9
SalBow8G3153 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.0e-07 58.5 60 55.0
BcaB01g04014 Brassica carinata HOM05D007540 ORTHO05D009531 2.6e-07 58.2 57 57.9
BcaB01g04017 Brassica carinata HOM05D007540 ORTHO05D009531 2.6e-07 58.2 57 57.9
Carub.0001s2385 Capsella rubella HOM05D007540 ORTHO05D009531 2.6e-07 58.2 57 52.6
Carub.0006s2979 Capsella rubella HOM05D007540 ORTHO05D009531 2.6e-07 58.2 60 53.3
CANSAT25G2830 Cannabis sativa HOM05D007540 ORTHO05D009531 3.4e-07 57.8 50 58.0
Carub.0007s3756 Capsella rubella HOM05D007540 ORTHO05D009531 3.4e-07 57.8 59 54.2
AT1G72260 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 4.4e-07 57.4 47 61.7
BraA01t04213Z Brassica rapa HOM05D007540 ORTHO05D009531 4.4e-07 57.4 50 54.0
Thhalv10002936m.g Eutrema salsugineum HOM05D007540 ORTHO05D009531 4.4e-07 57.4 58 51.7
BcaB04g18623 Brassica carinata HOM05D007540 ORTHO05D009531 5.8e-07 57.0 57 50.9
CARHR180470 Cardamine hirsuta HOM05D007540 ORTHO05D009531 5.8e-07 57.0 50 56.0
AT5G36910 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 7.6e-07 56.6 59 54.2
Carub.0004s0563 Capsella rubella HOM05D007540 ORTHO05D009531 7.6e-07 56.6 59 55.9
Carub.0003s3276 Capsella rubella HOM05D007540 ORTHO05D009531 9.9e-07 56.2 59 54.2
Carub.0007s3736 Capsella rubella HOM05D007540 ORTHO05D009531 9.9e-07 56.2 59 57.6
SalBow5G1295 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.9e-07 56.2 57 52.6
SalBow5G1353 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.9e-07 56.2 57 52.6
SalBow5G2392 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.9e-07 56.2 57 52.6
SalBow5G3852 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.9e-07 56.2 57 52.6
AL7G45500 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 1.3e-06 55.8 59 54.2
AT1G66100 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 2.2e-06 55.1 59 54.2
Carub.0003s3277 Capsella rubella HOM05D007540 ORTHO05D009531 2.2e-06 55.1 59 54.2
SalBow4G2623 Salvia bowleyana HOM05D007540 ORTHO05D009531 3.7e-06 54.3 56 46.4
Carub.0007s3749 Capsella rubella HOM05D007540 ORTHO05D009531 6.4e-06 53.5 59 54.2
Carub.0003s3278 Capsella rubella HOM05D007540 ORTHO05D009531 8.4e-06 53.1 57 56.1


User provided reference genes

Program Settings