Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14834 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-102 376.3 189 100.0
BcaC06g35162 Brassica carinata HOM05D003835 ORTHO05D004930 4.7e-87 324.7 189 86.8
BcaC08g44357 Brassica carinata HOM05D003835 ORTHO05D004930 3.3e-80 302.0 189 81.0
BcaC01g02049 Brassica carinata HOM05D003835 ORTHO05D004930 2.9e-73 278.9 189 77.8
BcaC03g16228 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-69 265.8 183 72.7
BcaB03g16388 Brassica carinata HOM05D003835 ORTHO05D004930 6.6e-49 198.0 170 62.9
BolC3t19175H Brassica oleracea HOM05D003835 ORTHO05D004930 5.6e-40 168.3 169 51.5
BolC2t11376H Brassica oleracea HOM05D003835 ORTHO05D004930 3.6e-39 165.6 164 53.7
BcaC09g48541 Brassica carinata HOM05D003835 ORTHO05D004930 5.3e-38 161.8 124 62.9
BcaC09g49877 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-37 160.2 152 58.6
BraA05t21178Z Brassica rapa HOM05D003835 ORTHO05D004930 5.8e-37 158.3 169 51.5
BcaB02g11345 Brassica carinata HOM05D003835 ORTHO05D004930 8.4e-36 154.5 122 59.8
BcaB08g35159 Brassica carinata HOM05D003835 ORTHO05D004930 9.3e-35 151.0 117 60.7
BcaC03g16751 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-34 150.2 140 53.6
BcaB06g26790 Brassica carinata HOM05D003835 ORTHO05D004930 7.8e-34 147.9 169 48.5
BolC8t47803H Brassica oleracea HOM05D003835 ORTHO05D004930 1.1e-32 144.1 137 58.4
BcaC03g16198 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-32 143.7 140 51.4
BcaC08g42800 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-30 136.7 82 81.7
BcaC09g50045 Brassica carinata HOM05D003835 ORTHO05D004930 8.4e-28 127.9 169 47.9
BraA08t32788Z Brassica rapa HOM05D003835 ORTHO05D004930 7.1e-27 124.8 110 59.1
BcaC05g28049 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-26 122.5 169 45.6
BolC9t56675H Brassica oleracea HOM05D003835 ORTHO05D004930 3.5e-26 122.5 122 59.0
BcaC09g49628 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-24 117.5 119 55.5
BcaC03g17352 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-23 112.5 130 46.9
BcaC06g35835 Brassica carinata HOM05D003835 ORTHO05D004930 6.2e-23 111.7 122 46.7
BcaC03g16557 Brassica carinata HOM05D007458 ORTHO05D009533 2.6e-21 106.3 182 36.3
BcaC06g35919 Brassica carinata HOM05D003835 ORTHO05D004930 7.6e-21 104.8 169 43.2
BcaC03g16200 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-19 100.1 58 82.8
BcaC04g20885 Brassica carinata HOM05D003835 ORTHO05D004930 5.5e-19 98.6 129 41.1
BcaB04g18230 Brassica carinata HOM05D003835 ORTHO05D004930 9.3e-19 97.8 121 43.0
BolC5t32563H Brassica oleracea HOM05D003835 ORTHO05D004930 3.5e-18 95.9 103 56.3
BcaB08g35438 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-17 94.0 132 40.9
BolC5t32809H Brassica oleracea HOM05D007458 ORTHO05D009533 3.9e-17 92.4 142 37.3
BcaC01g02254 Brassica carinata HOM05D003835 ORTHO05D004930 8.7e-17 91.3 101 54.5
BolC6t37001H Brassica oleracea HOM05D003835 ORTHO05D004930 1.5e-16 90.5 85 51.8
BcaC05g27891 Brassica carinata HOM05D003835 ORTHO05D004930 9.6e-16 87.8 106 40.6
BcaC01g01952 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-15 87.4 106 39.6
BcaC09g49664 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-15 87.4 100 42.0
BcaC04g20985 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-15 87.0 106 38.7
BcaC04g20805 Brassica carinata HOM05D003835 ORTHO05D004930 2.8e-15 86.3 103 41.7
BcaC08g43746 Brassica carinata HOM05D003835 ORTHO05D004930 4.8e-15 85.5 105 38.1
BcaC04g20889 Brassica carinata HOM05D003835 ORTHO05D004930 6.2e-15 85.1 106 40.6
BolC8t47793H Brassica oleracea HOM05D003835 ORTHO05D004930 6.2e-15 85.1 97 40.2
BcaC04g20623 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-14 84.3 106 39.6
BcaC07g37476 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-14 84.0 97 40.2
BraA08t32793Z Brassica rapa HOM05D007458 ORTHO05D009533 1.8e-14 83.6 131 37.4
Carub.0008s0643 Capsella rubella HOM05D003835 ORTHO05D004930 1.8e-14 83.6 105 35.2
BcaC03g16677 Brassica carinata HOM05D003835 ORTHO05D004930 6.9e-14 81.6 136 35.3
BcaB01g01339 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-13 80.5 106 39.6
BcaB03g16212 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-13 80.5 145 36.6
BcaC04g20991 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-13 80.1 106 38.7
BcaC04g20843 Brassica carinata HOM05D003835 ORTHO05D004930 3.4e-13 79.3 106 37.7
BcaC02g10813 Brassica carinata HOM05D003835 ORTHO05D004930 4.5e-13 79.0 106 36.8
BolC4t24052H Brassica oleracea HOM05D003835 ORTHO05D004930 4.5e-13 79.0 105 40.0
BcaC05g27575 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-12 77.8 92 39.1
BcaC03g17353 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-12 77.4 106 39.6
BcaC09g49753 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-12 77.4 106 35.8
BcaB01g01376 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-12 77.0 99 40.4
BcaB07g33106 Brassica carinata HOM05D003835 ORTHO05D004930 2.2e-12 76.6 113 37.2
BcaC04g20891 Brassica carinata HOM05D003835 ORTHO05D004930 4.9e-12 75.5 106 36.8
AL4G20670 Arabidopsis lyrata HOM05D003835 ORTHO05D004930 8.4e-12 74.7 104 34.6
BcaC02g10560 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-11 73.9 124 35.5
BcaC05g27887 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-11 73.6 92 40.2
BcaC06g36461 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-11 73.6 100 41.0
BcaC03g16671 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-11 72.8 131 33.6
BcaC05g28699 Brassica carinata HOM05D007458 ORTHO05D009533 4.2e-11 72.4 74 50.0
BcaC05g27589 Brassica carinata HOM05D003835 ORTHO05D004930 7.1e-11 71.6 131 32.8
BcaC01g02043 Brassica carinata HOM05D003835 ORTHO05D004930 9.3e-11 71.2 81 42.0
BraA04t16848Z Brassica rapa HOM05D003835 ORTHO05D004930 1.6e-10 70.5 73 45.2
BcaNung05987 Brassica carinata HOM05D003835 ORTHO05D004930 4.6e-10 68.9 75 42.7
BcaC06g36790 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-09 67.8 81 39.5
CANSAT35G0823 Cannabis sativa HOM05D014149 ORTHO05D004930 1.0e-09 67.8 112 32.1
BcaB07g33499 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-09 67.4 91 44.0
BcaC01g02336 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-09 67.4 87 39.1
BcaC03g16445 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-09 67.4 84 41.7
BcaB01g01286 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-09 66.2 89 39.3
BcaC07g37248 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-09 66.2 82 39.0
BcaC04g20888 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-09 65.9 65 44.6
BolC8t50199H Brassica oleracea HOM05D003835 ORTHO05D004930 6.7e-09 65.1 118 35.6
BcaB06g26909 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-08 64.3 106 34.9
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 1.5e-08 63.9 113 31.0
BcaC07g39533 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-08 63.5 117 35.0
BraA05t21182Z Brassica rapa HOM05D003835 ORTHO05D004930 1.9e-08 63.5 120 32.5
BcaC09g49552 Brassica carinata HOM05D003835 ORTHO05D004930 4.3e-08 62.4 62 45.2
Thhalv10002744m.g Eutrema salsugineum HOM05D003835 ORTHO05D004930 4.3e-08 62.4 76 36.8
A04p11820 Brassica napus HOM05D003835 ORTHO05D004930 9.7e-08 61.2 168 30.4
CARHR257890 Cardamine hirsuta HOM05D003835 ORTHO05D004930 9.7e-08 61.2 88 36.4
Oeu002338.1 Olea europaea HOM05D011150 ORTHO05D011451 3.7e-07 59.3 122 29.5
SalBow5G1224 Salvia bowleyana HOM05D010617 ORTHO05D011805 4.8e-07 58.9 165 30.9
SalBow5G2537 Salvia bowleyana HOM05D010617 ORTHO05D011805 4.8e-07 58.9 165 30.9
BcaB06g26993 Brassica carinata HOM05D007458 ORTHO05D009533 8.2e-07 58.2 82 36.6
BcaC03g16196 Brassica carinata HOM05D003835 ORTHO05D004930 8.2e-07 58.2 119 30.3
QL05p071009 Quercus lobata HOM05D013248 ORTHO05D000116 1.1e-06 57.8 115 29.6
BraA09t38710Z Brassica rapa HOM05D003835 ORTHO05D019916 1.8e-06 57.0 49 55.1
Rhsim08G0029200 Rhododendron simsii HOM05D009413 ORTHO05D000116 1.8e-06 57.0 84 33.3
BcaC07g37517 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-06 56.6 65 40.0
CSS0043108 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D012209 3.1e-06 56.2 85 29.4
BcaC03g16558 Brassica carinata HOM05D003835 ORTHO05D004930 4.1e-06 55.8 87 40.2
BcaC09g49698 Brassica carinata HOM05D003835 ORTHO05D004930 4.1e-06 55.8 62 45.2
BolC9t56683H Brassica oleracea HOM05D007458 ORTHO05D009533 4.1e-06 55.8 63 39.7
Ciclev10017562m.g Citrus clementina HOM05D009413 ORTHO05D000116 4.1e-06 55.8 78 34.6
Ciclev10019154m.g Citrus clementina HOM05D009413 ORTHO05D000116 4.1e-06 55.8 78 34.6
BcaC01g02153 Brassica carinata HOM05D003835 ORTHO05D004930 6.9e-06 55.1 167 27.5
QL08p058446 Quercus lobata HOM05D012835 ORTHO05D018094 6.9e-06 55.1 77 32.5
TWI36G1308 Tripterygium wilfordii HOM05D015010 ORTHO05D019384 9.0e-06 54.7 125 33.6


User provided reference genes

Program Settings