Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14748 Brassica carinata HOM05D007948 ORTHO05D006374 1.1e-62 243.0 113 100.0
BolC2t08332H Brassica oleracea HOM05D007948 ORTHO05D006374 1.9e-59 232.3 113 96.5
BcaB02g11411 Brassica carinata HOM05D007948 ORTHO05D006374 2.2e-47 192.2 109 79.8
BolC6t38712H Brassica oleracea HOM05D007948 ORTHO05D006374 2.9e-44 181.8 126 72.2
BolC9t57184H Brassica oleracea HOM05D007948 ORTHO05D006374 5.0e-44 181.0 120 73.3
BcaC03g15932 Brassica carinata HOM05D007948 ORTHO05D006374 2.0e-40 169.1 94 83.0
BcaC03g17091 Brassica carinata HOM05D007948 ORTHO05D006374 1.5e-32 142.9 70 87.1
BcaB07g32591 Brassica carinata HOM05D007948 ORTHO05D006374 9.5e-27 123.6 58 87.9
Sp7g07610 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.6e-26 122.9 107 54.2
SpUn0089_0010 Schrenkiella parvula HOM05D007948 ORTHO05D006374 2.1e-26 122.5 80 60.0
Sp7g06740 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.8e-25 119.4 80 60.0
BcaC04g21372 Brassica carinata HOM05D007948 ORTHO05D006374 7.5e-24 114.0 114 48.2
Sp3g25440 Schrenkiella parvula HOM05D007948 ORTHO05D006374 8.3e-23 110.5 109 45.0
BcaC02g09365 Brassica carinata HOM05D007948 ORTHO05D006374 1.2e-21 106.7 52 86.5
BolC4t25756H Brassica oleracea HOM05D007948 ORTHO05D006374 1.2e-21 106.7 52 86.5
BolC7t40924H Brassica oleracea HOM05D007948 ORTHO05D006374 1.0e-20 103.6 104 46.2
BcaC03g15866 Brassica carinata HOM05D007948 ORTHO05D006374 1.3e-20 103.2 73 56.2
BcaC04g21756 Brassica carinata HOM05D007948 ORTHO05D006374 1.3e-20 103.2 73 54.8
BcaC01g01818 Brassica carinata HOM05D007948 ORTHO05D006374 3.9e-20 101.7 75 54.7
BraA02t08206Z Brassica rapa HOM05D007948 ORTHO05D006374 6.6e-20 100.9 95 45.3
BcaNung05563 Brassica carinata HOM05D007948 ORTHO05D006374 6.2e-18 94.4 76 50.0
BcaC03g17008 Brassica carinata HOM05D007948 ORTHO05D006374 2.3e-17 92.4 77 66.2
SpUn0001_0790 Schrenkiella parvula HOM05D007948 ORTHO05D006374 5.2e-17 91.3 80 48.8
BcaC04g20586 Brassica carinata HOM05D007948 ORTHO05D006374 3.7e-15 85.1 85 45.9
BcaC03g15118 Brassica carinata HOM05D007948 ORTHO05D006374 4.9e-15 84.7 79 48.1
BcaC04g21528 Brassica carinata HOM05D008134 ORTHO05D006374 7.0e-14 80.9 75 42.7
BraA01t03624Z Brassica rapa HOM05D007948 ORTHO05D006374 1.6e-13 79.7 66 63.6
BcaC08g45112 Brassica carinata HOM05D008134 ORTHO05D006374 2.7e-13 79.0 73 42.5
C06p15100 Brassica napus HOM05D008134 ORTHO05D006374 3.5e-13 78.6 73 42.5
C09p41220 Brassica napus HOM05D008134 ORTHO05D006374 3.5e-13 78.6 73 42.5
BolC1t04558H Brassica oleracea HOM05D008134 ORTHO05D006374 3.5e-13 78.6 73 42.5
BolC2t10247H Brassica oleracea HOM05D008134 ORTHO05D006374 3.5e-13 78.6 103 36.9
C06p19630 Brassica napus HOM05D008134 ORTHO05D006374 6.0e-13 77.8 73 42.5
C03p11460 Brassica napus HOM05D008134 ORTHO05D006374 1.0e-12 77.0 73 41.1
C03p65520 Brassica napus HOM05D008134 ORTHO05D006374 1.0e-12 77.0 73 42.5
C07p16350 Brassica napus HOM05D008134 ORTHO05D006374 3.9e-12 75.1 73 41.1
BcaC01g02007 Brassica carinata HOM05D007948 ORTHO05D006374 5.0e-12 74.7 52 59.6
C04p38260 Brassica napus HOM05D008134 ORTHO05D006374 1.1e-11 73.6 64 43.8
BolC2t10321H Brassica oleracea HOM05D007948 ORTHO05D006374 7.3e-11 70.9 74 39.2
BcaC02g08352 Brassica carinata HOM05D007948 ORTHO05D006374 9.5e-11 70.5 70 50.0
BcaB05g24055 Brassica carinata HOM05D009982 ORTHO05D006374 2.1e-10 69.3 74 39.2
BolC8t48827H Brassica oleracea HOM05D009982 ORTHO05D006374 2.1e-10 69.3 74 37.8
BolC3t17984H Brassica oleracea HOM05D008134 ORTHO05D006374 3.6e-10 68.6 55 47.3
Sp1g30420 Schrenkiella parvula HOM05D008134 ORTHO05D006374 3.6e-10 68.6 66 42.4
C06p11100 Brassica napus HOM05D009982 ORTHO05D006374 8.1e-10 67.4 73 37.0
Sp3g26770 Schrenkiella parvula HOM05D008134 ORTHO05D006374 8.1e-10 67.4 82 37.8
BolC2t08062H Brassica oleracea HOM05D008134 ORTHO05D006374 1.1e-09 67.0 65 43.1
C04p67390 Brassica napus HOM05D009982 ORTHO05D006374 1.4e-09 66.6 69 39.1
SpUn0003_0150 Schrenkiella parvula HOM05D008134 ORTHO05D006374 5.2e-09 64.7 108 34.3
BcaB02g06512 Brassica carinata HOM05D009982 ORTHO05D006374 1.2e-08 63.5 73 37.0
BolC6t36230H Brassica oleracea HOM05D009982 ORTHO05D006374 1.2e-08 63.5 73 35.6
C05p28440 Brassica napus HOM05D008134 ORTHO05D012640 2.0e-08 62.8 49 46.9
BcaC04g21764 Brassica carinata HOM05D009982 ORTHO05D006374 2.6e-08 62.4 68 38.2
BolC4t23809H Brassica oleracea HOM05D009982 ORTHO05D006374 3.4e-08 62.0 74 35.1
BcaB01g05857 Brassica carinata HOM05D015617 ORTHO05D027394 4.4e-08 61.6 99 32.3
C02p43110 Brassica napus HOM05D009982 ORTHO05D006374 4.4e-08 61.6 77 35.1
BcaC04g20417 Brassica carinata HOM05D003348 ORTHO05D010016 9.9e-08 60.5 78 32.1
THA.LOC104803477 Tarenaya hassleriana HOM05D010522 ORTHO05D011833 1.7e-07 59.7 108 35.2
Sp1g30400 Schrenkiella parvula HOM05D007948 ORTHO05D006374 2.9e-07 58.9 43 51.2
Aa31sc16G80 Aethionema arabicum HOM05D014764 ORTHO05D017229 1.4e-06 56.6 60 40.0
BolC3t19235H Brassica oleracea HOM05D009982 ORTHO05D006374 2.4e-06 55.8 63 38.1
Sp4g10030 Schrenkiella parvula HOM05D012607 ORTHO05D014259 3.2e-06 55.5 71 35.2
Carub.0006s2726 Capsella rubella HOM05D001086 ORTHO05D001112 5.4e-06 54.7 69 33.3
BolC3t20290H Brassica oleracea HOM05D018744 ORTHO05D032076 9.2e-06 53.9 52 38.5
Sp1g30510 Schrenkiella parvula HOM05D006786 ORTHO05D008901 9.2e-06 53.9 67 46.3
THA.LOC104813232 Tarenaya hassleriana HOM05D010522 ORTHO05D011833 9.2e-06 53.9 106 33.0


User provided reference genes

Program Settings