Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14725 Brassica carinata HOM05D001308 ORTHO05D093834 9.4e-40 166.4 83 100.0
BcaB01g05866 Brassica carinata HOM05D001308 ORTHO05D001170 1.4e-19 99.4 47 97.9
BraA01t02427Z Brassica rapa HOM05D001308 ORTHO05D001170 1.6e-18 95.9 53 86.8
BcaC01g00279 Brassica carinata HOM05D001308 ORTHO05D001170 2.0e-18 95.5 47 89.4
BcaC02g09716 Brassica carinata HOM05D001308 ORTHO05D001170 2.0e-18 95.5 47 89.4
BcaC09g49878 Brassica carinata HOM05D001308 ORTHO05D001170 2.0e-18 95.5 47 89.4
BcaC09g52268 Brassica carinata HOM05D001308 ORTHO05D001170 2.0e-18 95.5 47 89.4
BcaC01g01707 Brassica carinata HOM05D001308 ORTHO05D001170 7.7e-18 93.6 47 87.2
BcaC03g17783 Brassica carinata HOM05D001308 ORTHO05D001170 2.2e-17 92.0 50 86.0
BcaC09g50498 Brassica carinata HOM05D001308 ORTHO05D001170 2.2e-17 92.0 47 91.5
BcaC06g36470 Brassica carinata HOM05D001308 ORTHO05D001170 6.5e-17 90.5 56 75.0
BcaB05g22857 Brassica carinata HOM05D001308 ORTHO05D001170 1.9e-16 89.0 47 87.2
BolC1t02418H Brassica oleracea HOM05D001308 ORTHO05D106242 3.2e-16 88.2 47 87.2
BcaC03g13634 Brassica carinata HOM05D001308 ORTHO05D001170 4.2e-16 87.8 50 80.0
BcaB06g26041 Brassica carinata HOM05D001308 ORTHO05D001170 9.4e-16 86.7 55 74.5
BcaC01g05807 Brassica carinata HOM05D001308 ORTHO05D001170 1.2e-15 86.3 47 85.1
BcaC08g45885 Brassica carinata HOM05D001308 ORTHO05D001170 2.7e-15 85.1 47 83.0
BolC6t38795H Brassica oleracea HOM05D001308 ORTHO05D000401 2.7e-15 85.1 47 83.0
BolC6t38796H Brassica oleracea HOM05D001308 ORTHO05D001170 2.7e-15 85.1 47 83.0
BcaB06g28058 Brassica carinata HOM05D001308 ORTHO05D001170 3.6e-15 84.7 47 85.1
BcaC01g03562 Brassica carinata HOM05D001308 ORTHO05D001170 6.1e-15 84.0 47 83.0
BolC3t17398H Brassica oleracea HOM05D001308 ORTHO05D001170 6.1e-15 84.0 47 83.0
BcaB03g15504 Brassica carinata HOM05D001308 ORTHO05D001170 8.0e-15 83.6 47 83.0
BcaB06g28080 Brassica carinata HOM05D001308 ORTHO05D001170 1.0e-14 83.2 50 80.0
BcaB05g25031 Brassica carinata HOM05D001308 ORTHO05D001170 1.8e-14 82.4 47 78.7
BcaB03g15419 Brassica carinata HOM05D001308 ORTHO05D001170 2.3e-14 82.0 47 80.9
BcaC06g33491 Brassica carinata HOM05D001308 ORTHO05D001170 2.3e-14 82.0 57 66.7
BcaC09g50601 Brassica carinata HOM05D001308 ORTHO05D001170 3.0e-14 81.6 47 80.9
BcaC01g04906 Brassica carinata HOM05D001308 ORTHO05D001170 4.0e-14 81.3 47 78.7
BcaC01g05593 Brassica carinata HOM05D001308 ORTHO05D001170 4.0e-14 81.3 47 78.7
BcaC02g07289 Brassica carinata HOM05D001308 ORTHO05D001170 4.0e-14 81.3 47 78.7
BcaC07g39870 Brassica carinata HOM05D001308 ORTHO05D001170 4.0e-14 81.3 47 78.7
BolC6t38797H Brassica oleracea HOM05D001308 ORTHO05D001170 4.0e-14 81.3 47 78.7
BolC6t38798H Brassica oleracea HOM05D001308 ORTHO05D001170 4.0e-14 81.3 47 78.7
BcaB02g10108 Brassica carinata HOM05D001308 ORTHO05D001170 8.8e-14 80.1 47 78.7
BolC3t18137H Brassica oleracea HOM05D001308 ORTHO05D001170 8.8e-14 80.1 47 76.6
BraA01t02150Z Brassica rapa HOM05D001308 ORTHO05D001170 1.2e-13 79.7 47 76.6
BcaB04g18605 Brassica carinata HOM05D001308 ORTHO05D001170 1.5e-13 79.3 47 76.6
BolC3t15607H Brassica oleracea HOM05D001114 ORTHO05D000940 1.5e-13 79.3 48 70.8
BcaC04g20460 Brassica carinata HOM05D001308 ORTHO05D001170 2.0e-13 79.0 47 72.3
BolC4t25413H Brassica oleracea HOM05D001308 ORTHO05D000401 2.6e-13 78.6 47 76.6
BcaB08g36308 Brassica carinata HOM05D001308 ORTHO05D001170 3.4e-13 78.2 45 80.0
BcaC05g28404 Brassica carinata HOM05D001308 ORTHO05D001170 3.4e-13 78.2 50 76.0
BcaB05g24635 Brassica carinata HOM05D001308 ORTHO05D001170 4.4e-13 77.8 47 76.6
BcaC08g43390 Brassica carinata HOM05D001308 ORTHO05D001170 4.4e-13 77.8 47 76.6
BcaB04g18925 Brassica carinata HOM05D001308 ORTHO05D001170 7.5e-13 77.0 47 76.6
BcaC05g29500 Brassica carinata HOM05D001308 ORTHO05D001170 9.8e-13 76.6 47 76.6
BcaC06g33882 Brassica carinata HOM05D001308 ORTHO05D001170 9.8e-13 76.6 47 76.6
BcaC06g34443 Brassica carinata HOM05D001308 ORTHO05D001170 9.8e-13 76.6 47 76.6
BolC4t28425H Brassica oleracea HOM05D001308 ORTHO05D001170 9.8e-13 76.6 47 76.6
BcaC02g11160 Brassica carinata HOM05D001308 ORTHO05D001170 1.7e-12 75.9 50 68.0
BcaC08g43389 Brassica carinata HOM05D001308 ORTHO05D001170 1.7e-12 75.9 47 74.5
BolC5t31403H Brassica oleracea HOM05D000214 ORTHO05D000131 2.2e-12 75.5 47 70.2
BcaC04g20142 Brassica carinata HOM05D001308 ORTHO05D001170 3.7e-12 74.7 47 74.5
BcaB06g27690 Brassica carinata HOM05D001308 ORTHO05D001170 6.3e-12 73.9 47 74.5
BcaC01g03313 Brassica carinata HOM05D001308 ORTHO05D001170 8.3e-12 73.6 47 70.2
BolC3t17637H Brassica oleracea HOM05D001308 ORTHO05D001170 8.3e-12 73.6 47 70.2
BolC6t39627H Brassica oleracea HOM05D001308 ORTHO05D000401 8.3e-12 73.6 47 74.5
BcaC01g05345 Brassica carinata HOM05D001308 ORTHO05D001170 1.8e-11 72.4 47 70.2
BolC3t15138H Brassica oleracea HOM05D001308 ORTHO05D001170 1.8e-11 72.4 47 70.2
BcaB03g16852 Brassica carinata HOM05D001308 ORTHO05D001170 2.4e-11 72.0 39 82.1
BcaB07g33345 Brassica carinata HOM05D001308 ORTHO05D001170 2.4e-11 72.0 47 74.5
BcaB07g32674 Brassica carinata HOM05D001308 ORTHO05D001170 7.0e-11 70.5 44 75.0
BcaC05g26315 Brassica carinata HOM05D001308 ORTHO05D001170 9.1e-11 70.1 39 76.9
BolC9t54038H Brassica oleracea HOM05D001308 ORTHO05D001170 2.7e-10 68.6 31 100.0
BolC9t58557H Brassica oleracea HOM05D001308 ORTHO05D001170 2.7e-10 68.6 39 79.5
BcaB04g19564 Brassica carinata HOM05D001308 ORTHO05D001170 3.5e-10 68.2 39 79.5
BcaC06g36639 Brassica carinata HOM05D001308 ORTHO05D001170 3.5e-10 68.2 39 76.9
BcaC02g09073 Brassica carinata HOM05D001308 ORTHO05D001170 4.5e-10 67.8 39 76.9
BcaB01g02886 Brassica carinata HOM05D001308 ORTHO05D001170 5.9e-10 67.4 47 59.6
BcaC08g44000 Brassica carinata HOM05D001308 ORTHO05D001170 7.7e-10 67.0 39 71.8
BcaC08g45776 Brassica carinata HOM05D001308 ORTHO05D001170 1.7e-09 65.9 39 74.4
BcaC06g36369 Brassica carinata HOM05D001308 ORTHO05D001170 3.8e-09 64.7 39 66.7
BcaC06g36432 Brassica carinata HOM05D001308 ORTHO05D001170 3.8e-09 64.7 39 66.7
BcaC06g33880 Brassica carinata HOM05D001308 ORTHO05D001170 5.0e-09 64.3 57 59.6
BcaC04g22719 Brassica carinata HOM05D001308 ORTHO05D001170 6.5e-09 63.9 39 74.4
BcaC07g38824 Brassica carinata HOM05D001308 ORTHO05D001170 6.5e-09 63.9 39 66.7
BcaC09g50294 Brassica carinata HOM05D001308 ORTHO05D001170 6.5e-09 63.9 39 74.4
BcaC01g05801 Brassica carinata HOM05D001308 ORTHO05D001170 1.5e-08 62.8 39 71.8
BolC4t23142H Brassica oleracea HOM05D001308 ORTHO05D104278 7.2e-08 60.5 34 76.5
BcaC06g34289 Brassica carinata HOM05D001308 ORTHO05D092968 2.3e-06 55.5 42 61.9


User provided reference genes

Program Settings