Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14706 Brassica carinata HOM05D000079 ORTHO05D002610 1.6e-44 182.2 80 100.0
C02p21410 Brassica napus HOM05D000079 ORTHO05D002610 1.6e-44 182.2 80 100.0
BolC2t08278H Brassica oleracea HOM05D000079 ORTHO05D002610 1.6e-44 182.2 80 100.0
A02p13230 Brassica napus HOM05D000079 ORTHO05D002610 7.6e-39 163.3 73 97.3
BraA02t06379Z Brassica rapa HOM05D000079 ORTHO05D002610 7.6e-39 163.3 73 97.3
Sp5g20230 Schrenkiella parvula HOM05D000079 ORTHO05D002610 8.4e-38 159.8 73 94.5
AL2G22140 Arabidopsis lyrata HOM05D000079 ORTHO05D002610 1.6e-36 155.6 73 93.2
AT1G65450 Arabidopsis thaliana HOM05D000079 ORTHO05D002610 4.6e-36 154.1 73 91.8
BraA07t30910Z Brassica rapa HOM05D000079 ORTHO05D002610 6.1e-36 153.7 71 93.0
Carub.0002s1119 Capsella rubella HOM05D000079 ORTHO05D002610 2.3e-35 151.8 73 90.4
BcaB05g24117 Brassica carinata HOM05D000079 ORTHO05D002610 3.9e-35 151.0 71 91.5
A07p32830 Brassica napus HOM05D000079 ORTHO05D002610 3.9e-35 151.0 71 91.5
Thhalv10018535m.g Eutrema salsugineum HOM05D000079 ORTHO05D002610 3.9e-35 151.0 73 90.4
C06p39060 Brassica napus HOM05D000079 ORTHO05D002610 1.1e-34 149.4 71 88.7
BolC6t38998H Brassica oleracea HOM05D000079 ORTHO05D002610 1.1e-34 149.4 71 88.7
CARHR057110 Cardamine hirsuta HOM05D000079 ORTHO05D002610 3.1e-32 141.4 73 84.9
Aa31LG2G2470 Aethionema arabicum HOM05D000079 ORTHO05D002610 7.7e-31 136.7 73 80.8
Phvul.004G062600 Phaseolus vulgaris HOM05D000079 ORTHO05D002610 7.4e-26 120.2 71 70.4
TAR362G0537 Trochodendron aralioides HOM05D000079 ORTHO05D002610 7.4e-26 120.2 74 73.0
Glyma.02G069100 Glycine max HOM05D000079 ORTHO05D002610 1.3e-25 119.4 72 72.2
Dinv17126 Davidia involucrata HOM05D000079 ORTHO05D002610 4.8e-25 117.5 74 71.6
TAR633G0440 Trochodendron aralioides HOM05D000079 ORTHO05D002610 4.8e-25 117.5 74 71.6
arahy.Tifrunner.gnm1.ann1.L8L2Y0 Arachis hypogaea HOM05D000079 ORTHO05D002610 8.2e-25 116.7 74 64.9
arahy.Tifrunner.gnm1.ann1.Q7SBED Arachis hypogaea HOM05D000079 ORTHO05D002610 1.1e-24 116.3 74 64.9
EL10Ac4g10024 Beta vulgaris HOM05D000079 ORTHO05D002610 1.1e-24 116.3 71 66.2
Hund07375 Selenicereus undatus HOM05D000079 ORTHO05D002610 1.4e-24 115.9 63 74.6
THA.LOC104825536 Tarenaya hassleriana HOM05D000079 ORTHO05D002610 1.4e-24 115.9 73 68.5
AUR62000272 Chenopodium quinoa HOM05D000079 ORTHO05D002610 1.8e-24 115.5 67 70.1
AUR62006620 Chenopodium quinoa HOM05D000079 ORTHO05D002610 1.8e-24 115.5 67 70.1
Nn1g09672 Nelumbo nucifera HOM05D000079 ORTHO05D002610 1.8e-24 115.5 75 64.0
Ciclev10010861m.g Citrus clementina HOM05D000079 ORTHO05D002610 5.3e-24 114.0 73 69.9
Cfa006219 Carpinus fangiana HOM05D000079 ORTHO05D002610 6.9e-24 113.6 76 67.1
Hma1.2p1_0620F.1_g190520 Hydrangea macrophylla HOM05D000079 ORTHO05D002610 6.9e-24 113.6 72 69.4
VMungo0464G2152 Vigna mungo HOM05D000079 ORTHO05D002610 6.9e-24 113.6 71 64.8
Atru.chr12.1648 Acer truncatum HOM05D000079 ORTHO05D002610 1.2e-23 112.8 67 71.6
Glyma.16G044300 Glycine max HOM05D000079 ORTHO05D002610 1.5e-23 112.5 70 67.1
Glyma.16G150600 Glycine max HOM05D000079 ORTHO05D002610 2.0e-23 112.1 63 73.0
Glyma.19G107700 Glycine max HOM05D000079 ORTHO05D002610 2.0e-23 112.1 63 69.8
Medtr7g084940 Medicago truncatula HOM05D000079 ORTHO05D002610 2.0e-23 112.1 70 68.6
Thecc.05G111000 Theobroma cacao HOM05D000079 ORTHO05D002610 2.0e-23 112.1 73 65.8
Gohir.D08G247950 Gossypium hirsutum HOM05D000079 ORTHO05D002610 2.6e-23 111.7 73 68.5
Gorai.004G264500 Gossypium raimondii HOM05D000079 ORTHO05D002610 2.6e-23 111.7 73 68.5
GSVIVG01003748001 Vitis vinifera HOM05D000079 ORTHO05D002610 2.6e-23 111.7 74 66.2
Ca_08245_v3 Cicer arietinum L. HOM05D000079 ORTHO05D002610 3.4e-23 111.3 74 64.9
HanXRQChr05g0141771 Helianthus annuus HOM05D000079 ORTHO05D002610 3.4e-23 111.3 75 66.7
ClCG11G009050 Citrullus lanatus HOM05D000079 ORTHO05D002610 5.9e-23 110.5 76 63.2
Nn1g09832 Nelumbo nucifera HOM05D000079 ORTHO05D002610 5.9e-23 110.5 73 57.5
Haze_04606 Corylus avellana HOM05D000079 ORTHO05D002610 7.7e-23 110.2 74 66.2
Gohir.A08G227600 Gossypium hirsutum HOM05D000079 ORTHO05D002610 7.7e-23 110.2 67 71.6
Lsat_1_v5_gn_0_14521 Lactuca sativa HOM05D000079 ORTHO05D002610 7.7e-23 110.2 74 66.2
Oeu034708.1 Olea europaea HOM05D000079 ORTHO05D002610 7.7e-23 110.2 76 64.5
unitig_37.g12273 Utricularia gibba HOM05D000079 ORTHO05D002610 7.7e-23 110.2 72 68.1
Sabra10G0138000 Salix brachista HOM05D000079 ORTHO05D002610 1.0e-22 109.8 63 79.4
Potri.010G180000 Populus trichocarpa HOM05D000079 ORTHO05D002610 1.3e-22 109.4 71 69.0
TPR.G32195 Trifolium pratense HOM05D000079 ORTHO05D002610 1.3e-22 109.4 67 70.1
DCAR_031595 Daucus carota HOM05D000079 ORTHO05D002610 1.7e-22 109.0 67 68.7
QL01p051268 Quercus lobata HOM05D000079 ORTHO05D002610 1.7e-22 109.0 74 63.5
Duzib106G1734 Durio zibethinus HOM05D000079 ORTHO05D002610 2.9e-22 108.2 63 71.4
Lj8A14T31 Lonicera japonica HOM05D000079 ORTHO05D002610 3.8e-22 107.8 70 67.1
CiPaw.07G085300 Carya illinoinensis HOM05D000079 ORTHO05D002610 5.0e-22 107.5 74 62.2
Nitab4.5_0005553g0020 Nicotiana tabacum HOM05D000079 ORTHO05D002610 5.0e-22 107.5 75 61.3
COL.COLO4_32081 Corchorus olitorius HOM05D000079 ORTHO05D002610 6.5e-22 107.1 71 64.8
Nitab4.5_0001003g0130 Nicotiana tabacum HOM05D000079 ORTHO05D002610 6.5e-22 107.1 76 61.8
Sc09g0001340 Simmondsia chinensis HOM05D000079 ORTHO05D002610 6.5e-22 107.1 76 64.5
Manes.12G001800 Manihot esculenta HOM05D000079 ORTHO05D002610 8.5e-22 106.7 63 73.0
CSS0002559 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D002610 1.1e-21 106.3 75 65.3
FAN09G0046 Fragaria x ananassa HOM05D000079 ORTHO05D002610 1.1e-21 106.3 73 67.1
MSTRG.27411 Avicennia marina HOM05D000079 ORTHO05D002610 1.4e-21 105.9 72 65.3
FAN14G3083 Fragaria x ananassa HOM05D000079 ORTHO05D002610 1.4e-21 105.9 73 67.1
VMungo1383G0154 Vigna mungo HOM05D000079 ORTHO05D002610 1.4e-21 105.9 65 69.2
Aqoxy2G04108 Aquilegia oxysepala HOM05D000079 ORTHO05D002610 1.9e-21 105.5 72 65.3
Cc00_g15670 Coffea canephora HOM05D000079 ORTHO05D002610 1.9e-21 105.5 72 62.5
Psat0s2994g0040 Pisum sativum HOM05D000079 ORTHO05D002610 1.9e-21 105.5 71 62.0
Eucgr.B01441 Eucalyptus grandis HOM05D000079 ORTHO05D002610 3.2e-21 104.8 77 59.7
Solyc11g008630.3 Solanum lycopersicum HOM05D000079 ORTHO05D002610 3.2e-21 104.8 75 60.0
Sopen11g004420 Solanum pennellii HOM05D000079 ORTHO05D002610 3.2e-21 104.8 75 60.0
PGSC0003DMG400016249 Solanum tuberosum HOM05D000079 ORTHO05D002610 4.2e-21 104.4 75 60.0
MSTRG.9241 Avicennia marina HOM05D000079 ORTHO05D002610 5.5e-21 104.0 74 62.2
PGR119G0406 Punica granatum HOM05D000079 ORTHO05D002610 5.5e-21 104.0 73 61.6
FvH4_6g00100 Fragaria vesca HOM05D000079 ORTHO05D002610 7.2e-21 103.6 73 65.8
Lalb_Chr24g0403061 Lupinus albus HOM05D000079 ORTHO05D002610 7.2e-21 103.6 68 64.7
ECA232G4138 Erigeron canadensis HOM05D000079 ORTHO05D002610 1.2e-20 102.8 75 61.3
Lj1g0001343 Lotus japonicus HOM05D000079 ORTHO05D002610 1.2e-20 102.8 74 59.5
Peaxi162Scf00254g00136 Petunia axillaris HOM05D000079 ORTHO05D002610 1.6e-20 102.4 78 60.3
Rhsim09G0128400 Rhododendron simsii HOM05D000079 ORTHO05D002610 1.6e-20 102.4 80 57.5
Manes.13G000900 Manihot esculenta HOM05D000079 ORTHO05D002610 2.1e-20 102.1 63 69.8
vmacro10417 Vaccinium macrocarpon HOM05D000079 ORTHO05D002610 2.7e-20 101.7 81 59.3
Medtr7g084910 Medicago truncatula HOM05D000079 ORTHO05D002610 4.7e-20 100.9 59 67.8
TWI36G0329 Tripterygium wilfordii HOM05D000079 ORTHO05D002610 6.1e-20 100.5 67 67.2
SGA_v2.0_scaffold13G06353 Striga asiatica HOM05D000079 ORTHO05D002610 3.0e-19 98.2 74 60.8
CsaV3_2G010300 Cucumis sativus L. HOM05D000079 ORTHO05D002610 5.1e-19 97.4 76 55.3
Prupe.6G364800 Prunus persica HOM05D000079 ORTHO05D002610 5.1e-19 97.4 91 50.5
HPP92_005393 Vanilla planifolia HOM05D000079 ORTHO05D002610 5.1e-19 97.4 71 57.7
ATR0743G096 Amborella trichopoda HOM05D000079 ORTHO05D002610 8.8e-19 96.7 62 69.4
Oeu001217.1 Olea europaea HOM05D000079 ORTHO05D002610 2.6e-18 95.1 76 56.6
Rhsim09G0128600 Rhododendron simsii HOM05D000079 ORTHO05D002610 1.7e-17 92.4 81 51.9
Migut.F02094 Erythranthe guttata HOM05D000079 ORTHO05D002610 1.4e-16 89.4 62 64.5
Migut.G00943 Erythranthe guttata HOM05D000079 ORTHO05D002610 4.5e-15 84.3 70 58.6
SalBow3G2979 Salvia bowleyana HOM05D000079 ORTHO05D002610 5.9e-15 84.0 70 55.7
TAR362G0306 Trochodendron aralioides HOM05D000079 ORTHO05D002610 7.7e-15 83.6 46 69.6
Migut.G00877 Erythranthe guttata HOM05D000079 ORTHO05D002610 2.2e-14 82.0 69 56.5
Migut.G00941 Erythranthe guttata HOM05D000079 ORTHO05D002610 2.2e-14 82.0 69 56.5
Phvul.001G097400 Phaseolus vulgaris HOM05D000079 ORTHO05D002610 2.2e-14 82.0 64 54.7
Migut.G00872 Erythranthe guttata HOM05D000079 ORTHO05D002610 2.9e-14 81.6 70 57.1
Migut.G00936 Erythranthe guttata HOM05D000079 ORTHO05D002610 6.5e-14 80.5 69 55.1
MSTRG.6501 Avicennia marina HOM05D000079 ORTHO05D002610 8.5e-14 80.1 69 52.2
Migut.G00874 Erythranthe guttata HOM05D000079 ORTHO05D002610 8.5e-14 80.1 67 59.7
Nn5g29340 Nelumbo nucifera HOM05D000079 ORTHO05D002610 1.1e-13 79.7 77 45.5
Aqoxy7G00883 Aquilegia oxysepala HOM05D000079 ORTHO05D002610 2.5e-13 78.6 67 49.3
Migut.J01873 Erythranthe guttata HOM05D000079 ORTHO05D002610 1.2e-12 76.3 67 49.3
ATR0743G222 Amborella trichopoda HOM05D000079 ORTHO05D002610 1.6e-12 75.9 64 54.7
SGA_v2.0_scaffold69G23036 Striga asiatica HOM05D000079 ORTHO05D002610 1.6e-12 75.9 67 52.2
SEGI_11611 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 3.6e-12 74.7 66 50.0
SEGI_05897 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 1.4e-11 72.8 71 49.3
SEGI_11538 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 1.4e-11 72.8 66 47.0
Migut.K00045 Erythranthe guttata HOM05D000079 ORTHO05D002610 2.3e-11 72.0 63 50.8
Migut.G00880 Erythranthe guttata HOM05D000079 ORTHO05D002610 3.0e-11 71.6 63 54.0
PSO541G2343 Papaver somniferum HOM05D000079 ORTHO05D002610 4.0e-11 71.2 72 36.1
SGA_v2.0_scaffold39G15170 Striga asiatica HOM05D000079 ORTHO05D002610 4.0e-11 71.2 67 49.3
SEGI_05006 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 5.2e-11 70.9 66 45.5
PSO541G6427 Papaver somniferum HOM05D000079 ORTHO05D002610 6.7e-11 70.5 64 43.8
SGA_v2.0_scaffold94G28408 Striga asiatica HOM05D000079 ORTHO05D002610 2.6e-10 68.6 69 42.0
SEGI_26267 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 9.7e-10 66.6 64 46.9
Migut.F02092 Erythranthe guttata HOM05D000079 ORTHO05D002610 1.1e-08 63.2 49 61.2
SEGI_38603 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 1.1e-08 63.2 65 43.1
Medtr8g096530 Medicago truncatula HOM05D000079 ORTHO05D000211 1.4e-08 62.8 62 38.7
Migut.G00884 Erythranthe guttata HOM05D000079 ORTHO05D002610 5.3e-08 60.8 39 64.1
AagrBONN_evm.TU.Sc2ySwM_344.4213 Anthoceros agrestis HOM05D000079 ORTHO05D002610 7.0e-08 60.5 70 38.6
SEGI_17536 Sequoiadendron giganteum HOM05D000079 ORTHO05D002610 7.0e-08 60.5 65 41.5
Ca_17568_v3 Cicer arietinum L. HOM05D000079 ORTHO05D000211 9.1e-08 60.1 62 40.3
Migut.D01559 Erythranthe guttata HOM05D000079 ORTHO05D002610 3.5e-07 58.2 67 47.8
SMO340G0234 Selaginella moellendorffii HOM05D000079 ORTHO05D002610 1.0e-06 56.6 64 40.6
Migut.K00016 Erythranthe guttata HOM05D000079 ORTHO05D002610 2.9e-06 55.1 71 35.2
TPR.G12977 Trifolium pratense HOM05D000079 ORTHO05D000211 3.8e-06 54.7 67 32.8
MBI04_g15579_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D002610 8.5e-06 53.5 63 42.9
MBI04_g43056_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D002610 8.5e-06 53.5 63 42.9
SMO226G0010 Selaginella moellendorffii HOM05D000079 ORTHO05D002610 8.5e-06 53.5 61 39.3


User provided reference genes

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