Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 9.5e-152 540.4 261 100.0
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 9.5e-152 540.4 261 100.0
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 1.0e-150 537.0 261 99.6
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 1.9e-144 516.2 263 95.1
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 7.3e-144 514.2 262 95.0
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 1.6e-138 496.5 265 91.3
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 3.5e-138 495.4 261 92.0
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 9.5e-128 460.7 262 85.5
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 1.2e-127 460.3 262 84.7
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 3.6e-127 458.8 262 86.3
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 6.8e-126 454.5 262 85.9
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 6.8e-126 454.5 262 85.9
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 1.2e-125 453.8 261 85.8
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 1.5e-125 453.4 262 85.5
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.9e-124 449.1 261 83.1
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 1.1e-123 447.2 262 84.7
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 6.6e-121 438.0 261 83.5
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 7.3e-120 434.5 262 82.8
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 6.6e-113 411.4 261 75.9
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 1.6e-111 406.8 259 76.1
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 2.8e-95 352.8 264 65.9
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 1.2e-93 347.4 266 62.8
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 2.6e-93 346.3 259 64.5
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 4.5e-93 345.5 259 64.5
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 2.2e-92 343.2 266 63.2
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 2.9e-92 342.8 266 62.4
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 5.5e-91 338.6 262 61.1
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 7.1e-91 338.2 270 61.9
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 7.1e-91 338.2 265 62.3
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 9.3e-91 337.8 265 62.6
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 7.9e-90 334.7 267 61.4
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 1.3e-89 334.0 262 63.7
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 3.9e-89 332.4 268 62.7
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 1.9e-88 330.1 266 61.7
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 2.5e-88 329.7 266 60.9
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 2.5e-88 329.7 253 62.1
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 3.3e-88 329.3 260 60.4
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 3.3e-88 329.3 266 61.7
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 8.2e-87 324.7 262 60.7
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 1.4e-86 323.9 266 60.5
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 9.0e-86 321.2 260 61.5
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 9.0e-86 321.2 261 59.4
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.2e-85 320.9 262 60.3
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 2.6e-85 319.7 259 60.6
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 2.6e-85 319.7 265 59.2
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 3.4e-85 319.3 267 61.0
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 8.4e-84 314.7 266 58.6
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 3.2e-83 312.8 261 59.4
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 3.2e-83 312.8 265 58.5
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 3.2e-83 312.8 261 58.2
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 1.6e-82 310.5 260 59.6
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 1.8e-81 307.0 272 55.1
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 1.8e-81 307.0 261 58.6
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 1.8e-81 307.0 264 58.0
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 1.8e-81 307.0 264 58.0
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 3.0e-81 306.2 263 57.8
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 3.9e-81 305.8 260 58.8
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 5.1e-81 305.4 243 60.5
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 5.1e-81 305.4 256 58.6
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 8.7e-81 304.7 260 57.7
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.1e-80 304.3 260 57.3
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 1.5e-80 303.9 256 57.8
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 2.5e-80 303.1 252 60.3
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 4.3e-80 302.4 264 56.4
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 4.3e-80 302.4 256 58.2
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 7.4e-80 301.6 257 57.2
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 7.4e-80 301.6 264 57.2
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 1.6e-79 300.4 256 58.2
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 2.2e-79 300.1 255 55.7
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 2.2e-79 300.1 259 54.8
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 8.2e-79 298.1 256 59.0
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 1.4e-78 297.4 277 54.9
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 3.1e-78 296.2 256 57.4
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 4.1e-78 295.8 261 57.5
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 9.0e-78 294.7 261 56.3
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 1.2e-77 294.3 261 56.3
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 1.2e-77 294.3 261 56.3
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 1.0e-76 291.2 275 53.5
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 3.8e-76 289.3 259 57.1
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 5.0e-76 288.9 256 53.9
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 2.5e-75 286.6 246 57.7
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 4.2e-75 285.8 218 66.1
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 4.2e-75 285.8 257 55.6
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 4.2e-75 285.8 264 54.9
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 1.2e-74 284.3 258 55.0
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 2.7e-74 283.1 251 57.4
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 3.6e-74 282.7 257 55.3
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 6.1e-74 282.0 261 55.2
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 1.8e-73 280.4 257 56.4
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 1.1e-72 277.7 248 56.9
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.1e-72 277.7 214 65.9
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.1e-72 277.7 214 65.9
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.9e-72 276.9 267 50.9
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 3.3e-72 276.2 264 51.5
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 7.4e-72 275.0 248 53.6
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.3e-71 274.2 214 64.0
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.3e-71 274.2 214 64.0
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 2.8e-71 273.1 216 61.6
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 1.8e-70 270.4 212 62.3
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 1.8e-70 270.4 231 58.9
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 5.3e-70 268.9 266 51.9
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 1.0e-68 264.6 241 56.8
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 1.7e-68 263.8 261 52.5
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 1.1e-67 261.2 262 50.8
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 2.5e-67 260.0 231 56.7
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 3.6e-66 256.1 299 47.2
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 2.0e-61 240.4 287 42.9
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 5.0e-60 235.7 259 49.0
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 2.5e-59 233.4 256 49.6
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 4.2e-59 232.6 254 47.6
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 1.4e-57 227.6 325 39.7
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 7.4e-56 221.9 262 42.7
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 1.3e-55 221.1 191 58.1
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 4.8e-55 219.2 265 41.5
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 2.5e-51 206.8 282 37.6
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.2e-50 204.5 255 43.5
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 4.4e-48 196.1 195 53.3
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 1.2e-45 188.0 190 50.5
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 1.9e-43 180.6 244 40.6
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 5.5e-43 179.1 207 46.4
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 6.8e-41 172.2 421 28.5
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 1.2e-40 171.4 290 34.8
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 3.4e-40 169.9 123 65.0
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 7.7e-37 158.7 133 60.2
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 7.7e-37 158.7 155 54.2
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 4.2e-35 152.9 156 48.7
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 8.3e-31 138.7 303 30.4
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 1.6e-29 134.4 385 26.0
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 5.9e-29 132.5 130 53.1
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 7.3e-27 125.6 76 73.7
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 1.6e-26 124.4 142 47.9
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 8.9e-25 118.6 120 53.3
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 6.4e-23 112.5 55 85.5
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 1.9e-22 110.9 149 39.6
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 1.1e-19 101.7 149 35.6
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 1.2e-18 98.2 134 39.6
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.4e-17 94.7 49 77.6
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 5.2e-17 92.8 51 72.5
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 1.1e-14 85.1 56 67.9
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 3.9e-12 76.6 166 34.3
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.9e-11 74.3 72 47.2
MBI19_g24589_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 8.9e-09 65.5 63 50.8
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 3.4e-08 63.5 38 68.4
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 3.4e-08 63.5 38 68.4
Nitab4.5_0001706g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.2e-07 60.8 29 82.8
CiPaw.05G218700 Carya illinoinensis HOM05D004971 ORTHO05D006289 6.4e-07 59.3 32 78.1
MBI19_g24592_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 3.2e-06 57.0 38 57.9


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