Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14600 Brassica carinata HOM05D022631 ORTHO05D024363 7.9e-166 587.0 294 100.0
BolC2t08173H Brassica oleracea HOM05D022631 ORTHO05D024363 4.6e-57 225.7 118 100.0
C02p20400 Brassica napus HOM05D022631 ORTHO05D024363 1.3e-56 224.2 118 99.2
BraA01t02806Z Brassica rapa HOM05D022631 ORTHO05D024363 8.7e-40 168.3 118 78.0
A03p66750 Brassica napus HOM05D022631 ORTHO05D024363 9.3e-34 148.3 123 72.4
A05p20030 Brassica napus HOM05D000496 ORTHO05D014937 6.5e-27 125.6 110 63.6
BraA05t20909Z Brassica rapa HOM05D000496 ORTHO05D014937 6.5e-27 125.6 110 63.6
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 3.6e-25 119.8 110 60.9
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-24 118.2 110 58.2
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 6.7e-24 115.5 112 54.5
BolC8t49340H Brassica oleracea HOM05D000496 ORTHO05D014937 6.7e-24 115.5 112 54.5
BcaC08g44730 Brassica carinata HOM05D000496 ORTHO05D019920 1.5e-23 114.4 110 56.4
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-23 113.2 120 56.7
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-23 113.2 110 59.1
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-23 112.8 112 53.6
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-23 112.8 108 63.9
BcaC03g16242 Brassica carinata HOM05D030143 ORTHO05D002152 4.4e-23 112.8 110 55.5
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-23 112.8 108 63.9
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 5.7e-23 112.5 110 55.5
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 4.8e-22 109.4 97 61.9
BcaC02g09460 Brassica carinata HOM05D000496 ORTHO05D014937 1.1e-21 108.2 110 59.1
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 1.1e-21 108.2 110 53.6
BolC3t20864H Brassica oleracea HOM05D000496 ORTHO05D014937 1.3e-19 101.3 108 52.8
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-18 96.3 108 58.3
BolC9t55004H Brassica oleracea HOM05D000496 ORTHO05D014937 5.2e-16 89.4 82 58.5
BolC7t43560H Brassica oleracea HOM05D000496 ORTHO05D039093 5.7e-15 85.9 110 50.0
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 7.4e-15 85.5 112 50.9
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 7.4e-15 85.5 112 50.9
BcaC06g34334 Brassica carinata HOM05D000496 ORTHO05D039093 9.7e-15 85.1 110 50.0
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-14 84.7 110 50.9
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 2.8e-14 83.6 111 49.5
BolC9t59068H Brassica oleracea HOM05D000496 ORTHO05D014937 2.8e-14 83.6 111 45.0
BcaB07g33420 Brassica carinata HOM05D000496 ORTHO05D014937 8.2e-14 82.0 109 49.5
BcaC09g49414 Brassica carinata HOM05D000496 ORTHO05D094999 1.4e-13 81.3 115 46.1
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-13 80.9 111 45.0
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-13 80.5 100 47.0
BolC3t19004H Brassica oleracea HOM05D000496 ORTHO05D019920 9.1e-13 78.6 113 51.3
BolC6t35943H Brassica oleracea HOM05D000496 ORTHO05D000411 9.1e-13 78.6 110 46.4
BcaC09g49650 Brassica carinata HOM05D000496 ORTHO05D095876 1.2e-12 78.2 111 52.3
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-12 78.2 114 46.5
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-12 77.8 108 46.3
BcaC01g02264 Brassica carinata HOM05D000496 ORTHO05D019920 2.0e-12 77.4 113 50.4
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-12 77.0 110 46.4
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-12 77.0 110 46.4
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-12 76.6 112 45.5
BolC5t33757H Brassica oleracea HOM05D000496 ORTHO05D014937 7.7e-12 75.5 118 41.5
BcaC03g17067 Brassica carinata HOM05D000496 ORTHO05D095706 2.2e-11 73.9 111 48.6
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 3.8e-11 73.2 114 48.2
BcaC01g01239 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-10 70.9 111 40.5
BcaC05g28640 Brassica carinata HOM05D000496 ORTHO05D014937 1.9e-10 70.9 110 43.6
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-10 70.5 111 44.1
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-10 70.1 95 45.3
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-10 70.1 110 41.8
BcaNung03853 Brassica carinata HOM05D000496 ORTHO05D039941 3.2e-10 70.1 78 52.6
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 3.2e-10 70.1 110 44.5
BcaC01g01965 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-10 68.6 113 40.7
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-10 68.6 109 44.0
BolC4t26549H Brassica oleracea HOM05D000496 ORTHO05D000411 2.7e-09 67.0 103 43.7
BolC4t26275H Brassica oleracea HOM05D000496 ORTHO05D039111 8.0e-09 65.5 107 42.1
BcaB06g27458 Brassica carinata HOM05D000496 ORTHO05D039111 1.0e-08 65.1 108 43.5
BolC7t41272H Brassica oleracea HOM05D000496 ORTHO05D000411 1.0e-08 65.1 114 42.1
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 1.4e-08 64.7 114 41.2
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-08 63.5 111 37.8
BolC3t17900H Brassica oleracea HOM05D000496 ORTHO05D039941 4.0e-08 63.2 74 55.4
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-07 61.2 88 47.7
BcaC01g03438 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-07 60.8 64 54.7
BolC2t08741H Brassica oleracea HOM05D000496 ORTHO05D019920 3.3e-07 60.1 101 42.6
C04p23060 Brassica napus HOM05D000496 ORTHO05D019920 5.7e-07 59.3 56 60.7
BcaC05g28506 Brassica carinata HOM05D000496 ORTHO05D093697 1.7e-06 57.8 108 43.5
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-06 57.8 109 43.1
BolC5t33309H Brassica oleracea HOM05D000496 ORTHO05D039269 1.7e-06 57.8 108 43.5
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-06 57.0 84 42.9
BcaC05g25070 Brassica carinata HOM05D030143 ORTHO05D039637 2.8e-06 57.0 66 50.0


User provided reference genes

Program Settings