Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14591 Brassica carinata HOM05D008384 ORTHO05D009842 8.5e-81 303.5 144 100.0
C04p42370 Brassica napus HOM05D015892 ORTHO05D009842 1.5e-40 169.9 143 57.3
C03p31500 Brassica napus HOM05D015892 ORTHO05D009842 4.3e-40 168.3 143 55.2
C07p60290 Brassica napus HOM05D015892 ORTHO05D009842 5.6e-40 167.9 143 55.2
C06p00830 Brassica napus HOM05D008384 ORTHO05D009842 4.7e-39 164.9 145 57.9
BraA04t16529Z Brassica rapa HOM05D015892 ORTHO05D009842 2.3e-38 162.5 147 55.8
BcaC01g04977 Brassica carinata HOM05D015892 ORTHO05D009842 1.8e-30 136.3 143 49.0
BraA01t02884Z Brassica rapa HOM05D015892 ORTHO05D009842 1.1e-27 127.1 117 55.6
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 3.0e-25 119.0 110 50.9
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 5.1e-25 118.2 110 49.1
BcaC01g03468 Brassica carinata HOM05D008384 ORTHO05D009842 1.9e-24 116.3 80 66.2
C01p40360 Brassica napus HOM05D008384 ORTHO05D009842 2.5e-24 115.9 110 46.4
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 2.1e-23 112.8 110 47.3
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 2.8e-23 112.5 110 46.4
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 8.1e-23 110.9 107 48.6
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 2.4e-22 109.4 109 48.6
C09p22240 Brassica napus HOM05D008384 ORTHO05D016044 2.9e-20 102.4 97 50.5
SpUn0001_0070 Schrenkiella parvula HOM05D008384 ORTHO05D009842 1.2e-18 97.1 143 37.1
BolC1t03992H Brassica oleracea HOM05D008384 ORTHO05D009842 6.0e-18 94.7 96 43.8
BolC3t15496H Brassica oleracea HOM05D015892 ORTHO05D009842 3.0e-17 92.4 91 48.4
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 3.3e-16 89.0 93 48.4
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 3.3e-16 89.0 93 48.4
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 7.3e-16 87.8 110 40.9
A05p23770 Brassica napus HOM05D006289 ORTHO05D042070 3.6e-15 85.5 93 45.2
BraA05t21247Z Brassica rapa HOM05D006289 ORTHO05D042070 3.6e-15 85.5 93 45.2
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 5.3e-14 81.6 93 45.2
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 5.3e-14 81.6 93 45.2
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 6.9e-14 81.3 93 45.2
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 9.0e-14 80.9 93 41.9
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 9.0e-14 80.9 87 47.1
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 2.0e-13 79.7 93 44.1
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 2.6e-13 79.3 93 40.9
C03p24860 Brassica napus HOM05D008384 ORTHO05D009842 2.6e-13 79.3 121 33.9
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 2.6e-13 79.3 93 40.9
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 3.4e-13 79.0 93 40.9
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 3.4e-13 79.0 93 40.9
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 7.6e-13 77.8 93 40.9
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 7.6e-13 77.8 93 37.6
BcaB07g33633 Brassica carinata HOM05D008384 ORTHO05D009842 9.9e-13 77.4 94 41.5
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 9.9e-13 77.4 93 38.7
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 1.3e-12 77.0 100 41.0
BolC2t10222H Brassica oleracea HOM05D008384 ORTHO05D009842 1.7e-12 76.6 94 43.6
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 6.4e-12 74.7 87 42.5
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 8.4e-12 74.3 93 39.8
BcaB07g33832 Brassica carinata HOM05D008384 ORTHO05D009842 8.4e-12 74.3 96 41.7
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 8.4e-12 74.3 93 39.8
C09p31540 Brassica napus HOM05D008384 ORTHO05D042359 1.1e-11 73.9 84 44.0
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 1.4e-11 73.6 93 36.6
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 2.4e-11 72.8 93 36.6
BcaB07g33986 Brassica carinata HOM05D008384 ORTHO05D009842 5.4e-11 71.6 113 31.9
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 5.4e-11 71.6 89 36.0
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 5.4e-11 71.6 93 37.6
BolC2t11345H Brassica oleracea HOM05D008384 ORTHO05D009842 7.1e-11 71.2 91 40.7
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 7.1e-11 71.2 93 39.8
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 9.3e-11 70.9 93 37.6
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 1.2e-10 70.5 93 33.3
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 1.6e-10 70.1 93 37.6
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 2.1e-10 69.7 93 37.6
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 3.5e-10 68.9 93 36.6
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 4.6e-10 68.6 93 35.5
A01p27450 Brassica napus HOM05D015892 ORTHO05D009842 6.0e-10 68.2 81 45.7
Sp4g09860 Schrenkiella parvula HOM05D005627 ORTHO05D011792 6.0e-10 68.2 80 38.8
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 7.9e-10 67.8 93 35.5
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 7.9e-10 67.8 93 32.3
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 7.9e-10 67.8 93 32.3
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 1.0e-09 67.4 93 35.5
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 1.0e-09 67.4 77 42.9
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 1.0e-09 67.4 77 42.9
C09p30140 Brassica napus HOM05D005627 ORTHO05D042654 1.3e-09 67.0 96 32.3
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 1.3e-09 67.0 93 36.6
BcaB01g01613 Brassica carinata HOM05D006289 ORTHO05D009842 1.8e-09 66.6 80 41.2
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 1.8e-09 66.6 93 33.3
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 2.3e-09 66.2 93 36.6
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 2.3e-09 66.2 93 36.6
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 3.0e-09 65.9 93 32.3
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 3.0e-09 65.9 93 36.6
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 3.0e-09 65.9 93 34.4
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 3.9e-09 65.5 93 36.6
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 3.9e-09 65.5 92 38.0
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 3.9e-09 65.5 92 38.0
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 3.9e-09 65.5 93 36.6
BcaB06g27189 Brassica carinata HOM05D066470 ORTHO05D009842 5.1e-09 65.1 79 41.8
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 8.7e-09 64.3 93 35.5
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 8.7e-09 64.3 93 35.5
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 1.1e-08 63.9 110 28.2
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 1.1e-08 63.9 93 33.3
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 1.9e-08 63.2 97 36.1
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 1.9e-08 63.2 88 36.4
BcaNung05731 Brassica carinata HOM05D005627 ORTHO05D011976 2.5e-08 62.8 91 40.7
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 2.5e-08 62.8 93 36.6
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 2.5e-08 62.8 93 36.6
BcaB02g10994 Brassica carinata HOM05D005627 ORTHO05D011976 3.3e-08 62.4 65 47.7
A07p06840 Brassica napus HOM05D008384 ORTHO05D009842 3.3e-08 62.4 64 42.2
BolC7t41062H Brassica oleracea HOM05D008384 ORTHO05D009842 3.3e-08 62.4 68 44.1
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 4.3e-08 62.0 93 34.4
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 4.3e-08 62.0 96 28.1
C05p38720 Brassica napus HOM05D034814 ORTHO05D039365 4.3e-08 62.0 58 44.8
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 4.3e-08 62.0 83 34.9
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 4.3e-08 62.0 77 39.0
BcaB08g34625 Brassica carinata HOM05D008384 ORTHO05D009842 5.6e-08 61.6 64 43.8
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 5.6e-08 61.6 93 35.5
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 5.6e-08 61.6 90 37.8
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 7.4e-08 61.2 92 32.6
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 7.4e-08 61.2 93 31.2
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 7.4e-08 61.2 93 34.4
BcaB04g19900 Brassica carinata HOM05D009418 ORTHO05D011792 9.6e-08 60.8 96 33.3
BcaC04g20562 Brassica carinata HOM05D006289 ORTHO05D016037 9.6e-08 60.8 62 40.3
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 9.6e-08 60.8 93 33.3
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 9.6e-08 60.8 93 29.0
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 9.6e-08 60.8 93 33.3
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 1.3e-07 60.5 93 31.2
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 1.6e-07 60.1 93 34.4
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 1.6e-07 60.1 93 30.1
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 1.6e-07 60.1 93 34.4
A10p07450 Brassica napus HOM05D006289 ORTHO05D009842 2.1e-07 59.7 68 39.7
C09p12390 Brassica napus HOM05D005627 ORTHO05D032198 2.1e-07 59.7 85 36.5
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 2.8e-07 59.3 92 33.7
BcaC06g35917 Brassica carinata HOM05D005627 ORTHO05D011976 2.8e-07 59.3 65 41.5
BcaC03g17142 Brassica carinata HOM05D005627 ORTHO05D011976 3.7e-07 58.9 65 40.0
BolC2t11140H Brassica oleracea HOM05D005627 ORTHO05D011976 3.7e-07 58.9 65 40.0
BcaC07g37194 Brassica carinata HOM05D005627 ORTHO05D011976 4.8e-07 58.5 65 41.5
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 4.8e-07 58.5 93 31.2
A09p06670 Brassica napus HOM05D006289 ORTHO05D009842 6.2e-07 58.2 83 36.1
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 8.1e-07 57.8 88 34.1
BolC9t55879H Brassica oleracea HOM05D005627 ORTHO05D009842 8.1e-07 57.8 68 38.2
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 1.1e-06 57.4 133 29.3
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 1.4e-06 57.0 92 32.6
A06p22330 Brassica napus HOM05D005627 ORTHO05D011976 1.4e-06 57.0 66 39.4
C07p12160 Brassica napus HOM05D005627 ORTHO05D013519 1.4e-06 57.0 96 28.1
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 1.8e-06 56.6 92 32.6
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 1.8e-06 56.6 93 32.3
C04p40320 Brassica napus HOM05D009418 ORTHO05D018626 2.4e-06 56.2 90 33.3
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 3.1e-06 55.8 92 32.6
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 4.0e-06 55.5 90 33.3
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 4.0e-06 55.5 90 32.2
BcaC06g35675 Brassica carinata HOM05D005627 ORTHO05D011976 4.0e-06 55.5 65 41.5
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 5.3e-06 55.1 119 30.3
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 5.3e-06 55.1 93 30.1
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 5.3e-06 55.1 119 30.3
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 5.3e-06 55.1 119 30.3
A03p31870 Brassica napus HOM05D005627 ORTHO05D027884 6.9e-06 54.7 93 28.0
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 6.9e-06 54.7 93 28.0
BraA04t18196Z Brassica rapa HOM05D005627 ORTHO05D027884 6.9e-06 54.7 93 28.0
BraA06t24543Z Brassica rapa HOM05D005627 ORTHO05D027884 6.9e-06 54.7 93 28.0
BraA06t25319Z Brassica rapa HOM05D005627 ORTHO05D011976 6.9e-06 54.7 66 39.4
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 9.0e-06 54.3 93 29.0
BolC8t47418H Brassica oleracea HOM05D005627 ORTHO05D042654 9.0e-06 54.3 66 39.4
BraA07t28074Z Brassica rapa HOM05D006289 ORTHO05D009842 9.0e-06 54.3 73 38.4


User provided reference genes

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